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Aggregatibacter segnis ATCC 33393 contig00002, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA - - HMPREF9064_r0001 5S ribosomal RNA 59 173 1
tRNA - - HMPREF9064_t0004 tRNA-Asp 181 257 1
tRNA - - HMPREF9064_t0005 tRNA-Trp 290 365 1
CDS ytfJ ZP_07888722.1 HMPREF9064_0089 transcriptional regulator YtfJ 406 954 -1
tRNA - - HMPREF9064_t0006 tRNA-Arg 1005 1081 -1
tRNA - - HMPREF9064_t0007 tRNA-Pro 1115 1191 -1
CDS folD ZP_07888723.1 HMPREF9064_0090 bifunctional methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase 1348 2205 1
CDS groEL ZP_07888724.1 HMPREF9064_0091 chaperone GroEL 2292 3935 -1
CDS groES ZP_07888725.1 HMPREF9064_0092 chaperone GroES 4025 4315 -1
CDS fxsA ZP_07888726.1 HMPREF9064_0093 FxsA cytoplasmic membrane protein (suppressor of F exclusion of phage T7) 4399 4881 -1
CDS aspA ZP_07888727.1 HMPREF9064_0094 aspartate ammonia-lyase 5106 6524 1
CDS waaQ ZP_07888728.1 HMPREF9064_0095 heptosyltransferase 6671 7714 1
CDS - ZP_07888729.1 HMPREF9064_0096 membrane protein 7655 8323 -1
CDS - ZP_07888730.1 HMPREF9064_0097 NupC family nucleoside transporter 8542 9810 1
CDS deoD ZP_07888731.1 HMPREF9064_0098 purine nucleoside phosphorylase 9926 10645 1
CDS - ZP_07888732.1 HMPREF9064_0099 conserved hypothetical protein 11060 12331 1
CDS hsf ZP_07888733.1 HMPREF9064_0100 hsf protein 12416 17419 1
CDS plp ZP_07888734.1 HMPREF9064_0101 lipoprotein PlpD 17619 18440 1
CDS udp ZP_07888735.1 HMPREF9064_0102 uridine phosphorylase 18576 19379 -1
CDS asnC ZP_07888736.1 HMPREF9064_0103 regulatory protein AsnC 19363 19815 -1
CDS asnA ZP_07888737.1 HMPREF9064_0104 aspartate-ammonia ligase 19987 20979 1
CDS dusA ZP_07888738.1 HMPREF9064_0105 tRNA-dihydrouridine synthase A 21111 22094 -1
CDS eriC ZP_07888739.1 HMPREF9064_0106 chloride channel family chloride transporter 22097 23485 -1
CDS argI ZP_07888740.1 HMPREF9064_0107 ornithine carbamoyltransferase 23746 24750 1
CDS arcC ZP_07888741.1 HMPREF9064_0108 carbamate kinase 24761 25693 1
CDS - ZP_07888742.1 HMPREF9064_0109 arginine/ornithine APC family transporter, antiporter 25804 27333 1
CDS lrp ZP_07888743.1 HMPREF9064_0110 Lrp family transcriptional regulator 27429 27896 1
CDS rpsJ ZP_07888744.1 HMPREF9064_0111 30S ribosomal protein S10 28209 28520 1
CDS rplC ZP_07888745.1 HMPREF9064_0112 50S ribosomal protein L3 28537 29163 1
CDS rplD ZP_07888746.1 HMPREF9064_0113 50S ribosomal protein L4 29179 29781 1
CDS rplW ZP_07888747.1 HMPREF9064_0114 50S ribosomal protein L23 29778 30080 1
CDS rplB ZP_07888748.1 HMPREF9064_0115 50S ribosomal protein L2 30101 30922 1
CDS rpsS ZP_07888749.1 HMPREF9064_0116 30S ribosomal protein S19 30948 31223 1
CDS rplV ZP_07888750.1 HMPREF9064_0117 50S ribosomal protein L22 31234 31566 1
CDS rpsC ZP_07888751.1 HMPREF9064_0118 30S ribosomal protein S3 31583 32290 1
CDS rplP ZP_07888752.1 HMPREF9064_0119 50S ribosomal protein L16 32304 32714 1
CDS rpmC ZP_07888753.1 HMPREF9064_0120 50S ribosomal protein L29 32714 32905 1
CDS rpsQ ZP_07888754.1 HMPREF9064_0121 30S ribosomal protein S17 32905 33162 1
CDS rplN ZP_07888755.1 HMPREF9064_0122 50S ribosomal protein L14 33460 33831 1
CDS rplX ZP_07888756.1 HMPREF9064_0123 50S ribosomal protein L24 33842 34153 1
CDS rplE ZP_07888757.1 HMPREF9064_0124 50S ribosomal protein L5 34171 34710 1
CDS rpsN ZP_07888758.1 HMPREF9064_0125 30S ribosomal protein S14 34723 35028 1
CDS rpsH ZP_07888759.1 HMPREF9064_0126 30S ribosomal protein S8 35065 35457 1
CDS rplF ZP_07888760.1 HMPREF9064_0127 50S ribosomal protein L6 35473 36006 1
CDS rplR ZP_07888761.1 HMPREF9064_0128 50S ribosomal protein L18 36020 36373 1
CDS rpsE ZP_07888762.1 HMPREF9064_0129 30S ribosomal protein S5 36389 36889 1
CDS rpmD ZP_07888763.1 HMPREF9064_0130 50S ribosomal protein L30 36896 37075 1
CDS rplO ZP_07888764.1 HMPREF9064_0131 50S ribosomal protein L15 37079 37513 1
CDS secY ZP_07888765.1 HMPREF9064_0132 preprotein translocase subunit SecY 37517 38842 1
CDS rpmJ ZP_07888766.1 HMPREF9064_0133 50S ribosomal protein L36 38867 38980 1
CDS rpsK ZP_07888767.1 HMPREF9064_0134 30S ribosomal protein S11 39490 39879 1
CDS rpsD ZP_07888768.1 HMPREF9064_0135 30S ribosomal protein S4 39909 40529 1
CDS rpoA ZP_07888769.1 HMPREF9064_0136 DNA-directed RNA polymerase subunit alpha 40558 41547 1
CDS rplQ ZP_07888770.1 HMPREF9064_0137 50S ribosomal protein L17 41589 41978 1
CDS lgtF ZP_07888771.1 HMPREF9064_0138 group 2 glycosyl transferase 42073 42834 -1
CDS kdsB ZP_07888772.1 HMPREF9064_0139 3-deoxy-D-manno-octulosonic-acid transferase 42959 44215 1
CDS coaD ZP_07888773.1 HMPREF9064_0140 pantetheine-phosphate adenylyltransferase 44216 44701 1
CDS kdkA ZP_07888774.1 HMPREF9064_0141 3-deoxy-D-manno-octulosonic acid kinase 44761 45486 -1
CDS rfaF ZP_07888775.1 HMPREF9064_0142 heptosyltransferase II (RfaF) 45574 46617 1
CDS pcaC ZP_07888776.1 HMPREF9064_0143 4-carboxymuconolactone decarboxylase 46705 47118 -1
CDS - ZP_07888777.1 HMPREF9064_0144 AraC family transcriptional regulator 47160 48077 1
CDS plsY ZP_07888778.1 HMPREF9064_0145 multidrug ABC superfamily ATP binding cassette transporter, ABC protein 48167 50011 1
CDS dapF ZP_07888779.1 HMPREF9064_0146 diaminopimelate epimerase 50182 51006 1
CDS xerC ZP_07888780.1 HMPREF9064_0147 tyrosine recombinase XerC 51023 51913 1
CDS yigB ZP_07888781.1 HMPREF9064_0148 conserved hypothetical protein 51924 52637 1
CDS - ZP_07888782.1 HMPREF9064_0149 conserved hypothetical protein 52839 53255 1
CDS - ZP_07888783.1 HMPREF9064_0150 conserved hypothetical protein 53262 54005 1
CDS plsC ZP_07888784.1 HMPREF9064_0151 acyltransferase 53990 54778 1
CDS acpP ZP_07888785.1 HMPREF9064_0152 acyl carrier protein 54756 55019 1
CDS acp ZP_07888786.1 HMPREF9064_0153 acyl carrier protein 55021 55272 1
CDS - ZP_07888787.1 HMPREF9064_0154 AMP-binding enzyme family protein 55353 56936 1
CDS - ZP_07888788.1 HMPREF9064_0155 membrane protein 56967 57530 1
CDS - ZP_07888789.1 HMPREF9064_0156 AMP-binding enzyme family protein 57523 58833 1
CDS - ZP_07888790.1 HMPREF9064_0157 group 2 glycosyl transferase 58830 59552 1
CDS - ZP_07888791.1 HMPREF9064_0158 acyltransferase 59549 60469 1
CDS - ZP_07888792.1 HMPREF9064_0159 4-hydroxybenzoyl-CoA thioesterase domain protein 60462 60923 1
CDS lolA ZP_07888793.1 HMPREF9064_0160 outer membrane lipoprotein carrier protein LolA 60923 61507 1
CDS - ZP_07888794.1 HMPREF9064_0161 conserved hypothetical protein 61515 63788 1
CDS - ZP_07888795.1 HMPREF9064_0162 conserved hypothetical protein 63795 64271 1
CDS fabF ZP_07888796.1 HMPREF9064_0163 3-oxoacyl-(acyl-carrier-protein) synthase II 64279 65502 1
CDS - ZP_07888797.1 HMPREF9064_0164 thioester dehydrase 65495 65938 1
CDS fabG ZP_07888798.1 HMPREF9064_0165 3-oxoacyl-[acyl-carrier-protein] reductase 65988 66716 1
CDS fabF2 ZP_07888799.1 HMPREF9064_0166 3-oxoacyl-(acyl-carrier-protein) synthase II 66756 68000 1
CDS - ZP_07888800.1 HMPREF9064_0167 conserved hypothetical protein 68028 68615 -1
CDS - ZP_07888801.1 HMPREF9064_0168 beta-ketoacyl synthase 68612 69598 -1
CDS - ZP_07888802.1 HMPREF9064_0169 conserved hypothetical protein 69598 69888 -1
CDS - ZP_07888803.1 HMPREF9064_0170 ABC superfamily ATP binding cassette transporter 69888 71129 -1
CDS - ZP_07888804.1 HMPREF9064_0171 ABC superfamily ATP binding cassette transporter, ABC protein 71123 71845 -1
CDS - ZP_07888805.1 HMPREF9064_0172 conserved hypothetical protein 71842 72831 -1
CDS - ZP_07888806.1 HMPREF9064_0173 conserved hypothetical protein 72864 73253 -1
CDS fabH ZP_07888807.1 HMPREF9064_0174 3-oxoacyl-(acyl-carrier-protein) synthase III 73243 74403 -1
CDS - ZP_07888808.1 HMPREF9064_0175 conserved hypothetical protein 74406 75326 -1
CDS thd ZP_07888809.1 HMPREF9064_0176 threonine dehydratase biosynthetic 75485 77026 -1
CDS - ZP_07888810.1 HMPREF9064_0177 conserved hypothetical protein 77023 77460 -1
CDS ilvD ZP_07888811.1 HMPREF9064_0178 dihydroxy-acid dehydratase 77596 79434 -1
CDS - ZP_07888812.1 HMPREF9064_0179 conserved hypothetical protein 79471 80106 -1
CDS ilvM ZP_07888813.1 HMPREF9064_0180 acetolactate synthase 80106 80321 -1
CDS ilvG ZP_07888814.1 HMPREF9064_0181 acetolactate synthase 80326 81978 -1
CDS cof ZP_07888815.1 HMPREF9064_0182 cof family hydrolase 82133 82951 1
CDS ccrB ZP_07888816.1 HMPREF9064_0183 camphor resistance protein CrcB 82951 83337 1