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Alteromonadales bacterium TW-7, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
rRNA - - ATW7_r18135 23S ribosomal RNA 1 280 1
CDS - ZP_01613099.1 ATW7_17668 antigen, putative 1047 1823 1
CDS - ZP_01613100.1 ATW7_17673 putative orphan protein 1959 2321 1
CDS - ZP_01613101.1 ATW7_17678 putative fatty acid cis/trans isomerase 2318 4648 1
CDS - ZP_01613102.1 ATW7_17683 Signal transduction histidine kinase 4758 6479 1
CDS - ZP_01613103.1 ATW7_17688 hypothetical protein 6872 7750 -1
CDS - ZP_01613104.1 ATW7_17693 acetolactate synthase II large subunit 8420 10069 1
CDS - ZP_01613105.1 ATW7_17698 acetolactate synthase II, small subunit 10066 10308 1
CDS - ZP_01613106.1 ATW7_17703 dihydroxyacid dehydratase; possibly homodimieric 10407 12263 1
CDS - ZP_01613107.1 ATW7_17708 threonine deaminase 12266 13819 1
CDS - ZP_01613108.1 ATW7_17713 hypothetical protein 13915 14958 1
CDS - ZP_01613109.1 ATW7_17718 hypothetical protein 15012 16202 1
CDS - ZP_01613110.1 ATW7_17723 beta-carbonic anhydrase 16228 16887 1
CDS - ZP_01613111.1 ATW7_17728 putative NADH dehydrogenase with NAD(P)-binding domain 16892 17536 1
CDS - ZP_01613112.1 ATW7_17733 hypothetical protein 17590 17853 -1
CDS - ZP_01613113.1 ATW7_17738 Rep helicase, a single-stranded DNA-dependent ATPase 18015 20033 1
CDS - ZP_01613114.1 ATW7_17743 putative GGDEF domain protein 20043 22607 -1
CDS - ZP_01613115.1 ATW7_17748 Cytochrome c5 22770 23165 -1
CDS - ZP_01613116.1 ATW7_17753 isoprenoid biosynthesis protein with amidotransferase-like domain 23382 24029 -1
CDS - ZP_01613117.1 ATW7_17758 multifunctional DNA polymerase I: 5'->3' exonuclease (N-terminal); 3'->5' polymerase; 3'->5' exonuclease (C-terminal) 24553 27288 1
CDS - ZP_01613118.1 ATW7_17763 hypothetical protein 27806 28393 1
CDS - ZP_01613119.1 ATW7_17768 hypothetical protein 28390 28908 1
CDS - ZP_01613120.1 ATW7_17773 GTP-binding protein 28905 29582 -1
CDS - ZP_01613121.1 ATW7_17778 Cytochrome c4 29863 30495 1
CDS - ZP_01613122.1 ATW7_17783 hypothetical protein 31236 31829 1
CDS - ZP_01613123.1 ATW7_17788 hypothetical protein 31843 32358 1
CDS - ZP_01613124.1 ATW7_17793 coproporphyrinogen III oxidase 32433 33806 -1
CDS - ZP_01613125.1 ATW7_17798 putative transport protein (ABC superfamily, ATP-binding) 33921 34454 -1
CDS - ZP_01613126.1 ATW7_17803 putative enzyme for maturation of Microcin B17 and degradation of CcdA 34599 35948 1
CDS - ZP_01613127.1 ATW7_17808 hypothetical protein 36040 36519 1
CDS - ZP_01613128.1 ATW7_17813 Peptidase, M13 family (lipoprotein) 36762 38837 1
CDS - ZP_01613129.1 ATW7_17818 hypothetical protein 39094 40164 -1
CDS - ZP_01613130.1 ATW7_17823 7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP 40179 40577 -1
CDS secA ZP_01613131.1 ATW7_17828 translocase 40638 43346 -1
CDS - ZP_01613132.1 ATW7_17833 hypothetical protein 43753 44523 1
CDS hutH ZP_01613133.1 ATW7_17838 histidine ammonia-lyase 44532 46064 -1
CDS - ZP_01613134.1 ATW7_17843 urocanate hydratase 46067 47740 -1
CDS - ZP_01613135.1 ATW7_17848 Histidine utilization repressor (GntR family) protein 47811 48518 -1
CDS - ZP_01613136.1 ATW7_17853 Imidazolonepropionase (imidazolone-5-propionate hydrolase) 48639 49886 1
CDS - ZP_01613137.1 ATW7_17858 hypothetical protein 50011 51672 1
CDS - ZP_01613138.1 ATW7_17863 Formiminoglutamate hydrolase 51798 52859 -1
CDS - ZP_01613139.1 ATW7_17868 ribonuclease activity regulator protein RraA 52861 53358 -1
CDS - ZP_01613140.1 ATW7_17873 hypothetical protein 53564 54103 1
CDS - ZP_01613141.1 ATW7_17878 hypothetical protein 54100 55131 1
CDS - ZP_01613142.1 ATW7_17883 putative methyl-accepting chemotaxis protein 55240 57120 1
CDS - ZP_01613143.1 ATW7_17888 hypothetical protein 57144 57518 -1
CDS - ZP_01613144.1 ATW7_17893 ATP-dependent protease ATP-binding subunit 57583 58911 -1
CDS - ZP_01613145.1 ATW7_17898 ATP-dependent protease peptidase subunit 58923 59441 -1
CDS - ZP_01613146.1 ATW7_17903 hypothetical protein 59521 60048 -1
CDS - ZP_01613147.1 ATW7_17908 Primosome factor Y, also called protein n'; ATP-dependent DNA helicase activity required for recA-dependent stable DNA 60069 62255 -1
CDS - ZP_01613148.1 ATW7_17913 50S ribosomal subunit protein L31 62487 62702 1
CDS - ZP_01613149.1 ATW7_17918 putative NADP-dependent malic enzyme (NADP-dependent malic oxidoreductase (N-terminal); phosphotransacetylase 63323 64564 1
CDS - ZP_01613150.1 ATW7_17923 transcriptional repressor protein MetJ 64633 64953 -1
CDS - ZP_01613151.1 ATW7_17928 cystathionine gamma-synthase, PLP-dependent 65153 66382 1
CDS metL ZP_01613152.1 ATW7_17933 bifunctional aspartate kinase II/homoserine dehydrogenase II 66388 68733 1
CDS - ZP_01613153.1 ATW7_17938 Murein polymerase, bifunctional murein transglycosylase (N-terminal) and transpeptidase (C-terminal) 68882 71383 -1
CDS - ZP_01613154.1 ATW7_17943 putative Type IV pilus biogenesis protein PilM 71515 72594 1
CDS - ZP_01613155.1 ATW7_17948 putative Type IV pilus biogenesis protein PilN 72582 73154 1
CDS - ZP_01613156.1 ATW7_17953 putative Type IV pilus biogenesis protein PilO 73144 73749 1
CDS - ZP_01613157.1 ATW7_17958 putative Type IV pilus biogenesis protein PilP 73746 74285 1
CDS - ZP_01613158.1 ATW7_17963 putative type IV pilus biogenesis protein PilQ (cytoplasmic ATPase) 74272 76365 1
CDS - ZP_01613159.1 ATW7_17968 shikimate kinase I 76550 77068 1
CDS - ZP_01613160.1 ATW7_17973 dehydroquinate synthase 77099 78169 1
CDS - ZP_01613161.1 ATW7_17978 hypothetical protein 78170 79492 1
CDS - ZP_01613162.1 ATW7_17983 DNA adenine methylase 79546 80415 1
CDS - ZP_01613163.1 ATW7_17988 hypothetical protein 80549 80845 -1
CDS - ZP_01613164.1 ATW7_17993 D-ribulose-5-phosphate 3-epimerase 81051 81734 1
CDS - ZP_01613165.1 ATW7_17998 phosphoglycolate phosphatase, contains a phosphatase-like domain 81734 82399 1
CDS - ZP_01613166.1 ATW7_18003 tryptophanyl-tRNA synthetase 82431 83435 1
CDS - ZP_01613167.1 ATW7_18008 hypothetical protein 83549 84469 -1
CDS - ZP_01613168.1 ATW7_18013 hypothetical protein 84503 84868 -1
CDS - ZP_01613169.1 ATW7_18018 hypothetical protein 84858 85049 1
CDS - ZP_01613170.1 ATW7_18023 putative transcriptional regulator 85150 87294 1
CDS - ZP_01613171.1 ATW7_18028 DNA excision repair enzyme subunit, with UvrBC 87377 90196 -1
CDS - ZP_01613172.1 ATW7_18033 putative transporter (MFS family) protein 90358 91725 1
CDS - ZP_01613173.1 ATW7_18038 Single-strand binding protein (SSB) (Helix-destabilizing protein) 91746 92447 1
CDS - ZP_01613174.1 ATW7_18043 protein with EAL domain 92713 94341 1
CDS - ZP_01613175.1 ATW7_18048 putative D-cysteine desulfhydrase, PLP-dependent enzyme 94403 95311 -1
CDS - ZP_01613176.1 ATW7_18053 putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshA (pilus type IV) 95487 96008 1
CDS - ZP_01613177.1 ATW7_18058 hypothetical protein 96383 98431 1
CDS - ZP_01613178.1 ATW7_18063 cell wall structural complex MreBCD, actin-like component MreB 98563 99606 1
CDS - ZP_01613179.1 ATW7_18068 putative rod shape-determining protein 99606 100448 1
CDS - ZP_01613180.1 ATW7_18073 rod shape-determining protein 100441 100920 1
CDS - ZP_01613181.1 ATW7_18078 hypothetical protein 100920 101489 1
CDS - ZP_01613182.1 ATW7_18083 ribonuclease G 101491 102963 1
CDS - ZP_01613183.1 ATW7_18088 hypothetical protein 102963 106826 1
CDS - ZP_01613184.1 ATW7_18093 putative hydrolase, carbon-nitrogen family protein 106819 107658 1
CDS - ZP_01613185.1 ATW7_18098 putative suppressor of CsrA inhibitory activity; putative peptidase; involved in the control of DNA gyrase 107655 109094 1
CDS - ZP_01613186.1 ATW7_18103 hypothetical protein 109147 110001 -1
CDS - ZP_01613187.1 ATW7_18108 glutathione reductase 110188 111549 -1
CDS - ZP_01613188.1 ATW7_18113 oligopeptidase A 111882 113921 1
CDS - ZP_01613189.1 ATW7_18118 probable two-component system 114059 115237 1
CDS - ZP_01613190.1 ATW7_18123 hypothetical protein 115295 116050 1
CDS - ZP_01613191.1 ATW7_18128 putative tRNA/rRNA methyltransferase (trmH family) protein 116154 116510 1