• Summary page

Sequences

• ctg00023, whole genome shotgun sequence
• ctg00022, whole genome shotgun sequence
• ctg00021, whole genome shotgun sequence
• ctg00181, whole genome shotgun sequence
• ctg00131, whole genome shotgun sequence
• ctg00166, whole genome shotgun sequence
• ctg00035, whole genome shotgun sequence
• ctg00178, whole genome shotgun sequence
• ctg00176, whole genome shotgun sequence
• ctg00011, whole genome shotgun sequence
• ctg00165, whole genome shotgun sequence
• ctg00174, whole genome shotgun sequence
• ctg00160, whole genome shotgun sequence
• ctg00168, whole genome shotgun sequence
• ctg00164, whole genome shotgun sequence
• ctg00128, whole genome shotgun sequence
• ctg00010, whole genome shotgun sequence
• ctg00007, whole genome shotgun sequence
• ctg00024, whole genome shotgun sequence
• ctg00179, whole genome shotgun sequence
• ctg00172, whole genome shotgun sequence
• ctg00148, whole genome shotgun sequence
• ctg00138, whole genome shotgun sequence
• ctg00184, whole genome shotgun sequence
• ctg00161, whole genome shotgun sequence
• ctg00025, whole genome shotgun sequence
• ctg00137, whole genome shotgun sequence
• ctg00173, whole genome shotgun sequence
• ctg00141, whole genome shotgun sequence
• ctg00015, whole genome shotgun sequence
• ctg00088, whole genome shotgun sequence
• ctg00034, whole genome shotgun sequence
• ctg00136, whole genome shotgun sequence
• ctg00030, whole genome shotgun sequence
• ctg00139, whole genome shotgun sequence
• ctg00032, whole genome shotgun sequence
• ctg00017, whole genome shotgun sequence
• ctg00145, whole genome shotgun sequence
• ctg00132, whole genome shotgun sequence
• ctg00180, whole genome shotgun sequence
• ctg00157, whole genome shotgun sequence
• ctg00013, whole genome shotgun sequence
• ctg00009, whole genome shotgun sequence
• ctg00147, whole genome shotgun sequence
• ctg00159, whole genome shotgun sequence
• ctg00158, whole genome shotgun sequence
• ctg00029, whole genome shotgun sequence
• ctg00033, whole genome shotgun sequence
• ctg00162, whole genome shotgun sequence
• ctg00089, whole genome shotgun sequence
• ctg00167, whole genome shotgun sequence
• ctg00099, whole genome shotgun sequence
• ctg00102, whole genome shotgun sequence
• ctg00012, whole genome shotgun sequence
• ctg00019, whole genome shotgun sequence
• ctg00031, whole genome shotgun sequence
• ctg00188, whole genome shotgun sequence
• ctg00170, whole genome shotgun sequence
• ctg00026, whole genome shotgun sequence
• ctg00087, whole genome shotgun sequence
• ctg00014, whole genome shotgun sequence
• ctg00090, whole genome shotgun sequence
• ctg00182, whole genome shotgun sequence
• ctg00101, whole genome shotgun sequence
• ctg00135, whole genome shotgun sequence
• ctg00121, whole genome shotgun sequence
• ctg00171, whole genome shotgun sequence
• ctg00027, whole genome shotgun sequence
• ctg00177, whole genome shotgun sequence
• ctg00122, whole genome shotgun sequence
• ctg00008, whole genome shotgun sequence
• ctg00100, whole genome shotgun sequence
• ctg00096, whole genome shotgun sequence
• ctg00143, whole genome shotgun sequence
• ctg00154, whole genome shotgun sequence
• ctg00130, whole genome shotgun sequence
• ctg00020, whole genome shotgun sequence
• ctg00149, whole genome shotgun sequence
• ctg00129, whole genome shotgun sequence
• ctg00169, whole genome shotgun sequence
• ctg00028, whole genome shotgun sequence
• ctg00119, whole genome shotgun sequence
• ctg00134, whole genome shotgun sequence
• ctg00133, whole genome shotgun sequence
• ctg00018, whole genome shotgun sequence
• ctg00098, whole genome shotgun sequence
• ctg00097, whole genome shotgun sequence
• ctg00116, whole genome shotgun sequence
• ctg00163, whole genome shotgun sequence
• ctg00156, whole genome shotgun sequence
• ctg00105, whole genome shotgun sequence
• ctg00086, whole genome shotgun sequence
• ctg00120, whole genome shotgun sequence
• ctg00175, whole genome shotgun sequence
• ctg00183, whole genome shotgun sequence
• ctg00092, whole genome shotgun sequence
• ctg00187, whole genome shotgun sequence
• ctg00155, whole genome shotgun sequence
• ctg00091, whole genome shotgun sequence
• ctg00211, whole genome shotgun sequence
• ctg00103, whole genome shotgun sequence
• ctg00093, whole genome shotgun sequence
• ctg00153, whole genome shotgun sequence
• ctg00144, whole genome shotgun sequence
• ctg00095, whole genome shotgun sequence
• ctg00140, whole genome shotgun sequence
• ctg00115, whole genome shotgun sequence
• ctg00016, whole genome shotgun sequence
• ctg00111, whole genome shotgun sequence
• ctg00050, whole genome shotgun sequence
• ctg00152, whole genome shotgun sequence
• ctg00235, whole genome shotgun sequence
• ctg00094, whole genome shotgun sequence
• ctg00146, whole genome shotgun sequence
• ctg00113, whole genome shotgun sequence
• ctg00142, whole genome shotgun sequence
• ctg00106, whole genome shotgun sequence
• ctg00191, whole genome shotgun sequence
• ctg00118, whole genome shotgun sequence
• ctg00262, whole genome shotgun sequence
• ctg00150, whole genome shotgun sequence
• ctg00047, whole genome shotgun sequence
• ctg00042, whole genome shotgun sequence
• ctg00055, whole genome shotgun sequence
• ctg00117, whole genome shotgun sequence
• ctg00046, whole genome shotgun sequence
• ctg00231, whole genome shotgun sequence
• ctg00104, whole genome shotgun sequence
• ctg00038, whole genome shotgun sequence
• ctg00063, whole genome shotgun sequence
• ctg00207, whole genome shotgun sequence
• ctg00196, whole genome shotgun sequence
• ctg00037, whole genome shotgun sequence
• ctg00077, whole genome shotgun sequence
• ctg00044, whole genome shotgun sequence
• ctg00114, whole genome shotgun sequence
• ctg00001, whole genome shotgun sequence
• ctg00067, whole genome shotgun sequence
• ctg00266, whole genome shotgun sequence
• ctg00240, whole genome shotgun sequence
• ctg00052, whole genome shotgun sequence
• ctg00201, whole genome shotgun sequence
• ctg00043, whole genome shotgun sequence
• ctg00250, whole genome shotgun sequence
• ctg00202, whole genome shotgun sequence
• ctg00070, whole genome shotgun sequence
• ctg00084, whole genome shotgun sequence
• ctg00005, whole genome shotgun sequence
• ctg00125, whole genome shotgun sequence
• ctg00069, whole genome shotgun sequence
• ctg00151, whole genome shotgun sequence
• ctg00110, whole genome shotgun sequence
• ctg00271, whole genome shotgun sequence
• ctg00208, whole genome shotgun sequence
• ctg00041, whole genome shotgun sequence
• ctg00244, whole genome shotgun sequence
• ctg00206, whole genome shotgun sequence
• ctg00045, whole genome shotgun sequence
• ctg00081, whole genome shotgun sequence
• ctg00080, whole genome shotgun sequence
• ctg00039, whole genome shotgun sequence
• ctg00186, whole genome shotgun sequence
• ctg00220, whole genome shotgun sequence
• ctg00279, whole genome shotgun sequence
• ctg00229, whole genome shotgun sequence
• ctg00006, whole genome shotgun sequence
• ctg00036, whole genome shotgun sequence
• ctg00189, whole genome shotgun sequence
• ctg00261, whole genome shotgun sequence
• ctg00221, whole genome shotgun sequence
• ctg00218, whole genome shotgun sequence
• ctg00073, whole genome shotgun sequence
• ctg00127, whole genome shotgun sequence
• ctg00200, whole genome shotgun sequence
• ctg00232, whole genome shotgun sequence
• ctg00212, whole genome shotgun sequence
• ctg00205, whole genome shotgun sequence
• ctg00085, whole genome shotgun sequence
• ctg00198, whole genome shotgun sequence
• ctg00072, whole genome shotgun sequence
• ctg00267, whole genome shotgun sequence
• ctg00242, whole genome shotgun sequence
• ctg00219, whole genome shotgun sequence
• ctg00049, whole genome shotgun sequence
• ctg00263, whole genome shotgun sequence
• ctg00199, whole genome shotgun sequence
• ctg00068, whole genome shotgun sequence
• ctg00285, whole genome shotgun sequence
• ctg00275, whole genome shotgun sequence
• ctg00059, whole genome shotgun sequence
• ctg00190, whole genome shotgun sequence
• ctg00265, whole genome shotgun sequence
• ctg00260, whole genome shotgun sequence
• ctg00053, whole genome shotgun sequence
• ctg00227, whole genome shotgun sequence
• ctg00245, whole genome shotgun sequence
• ctg00236, whole genome shotgun sequence
• ctg00060, whole genome shotgun sequence
• ctg00064, whole genome shotgun sequence
• ctg00065, whole genome shotgun sequence

Taxonomy

cellular organisms
» Bacteria
» Proteobacteria
» Betaproteobacteria
» Burkholderiales
» Burkholderiaceae
» Burkholderia

Burkholderia sp. Ch1-1

BCh11DRAFT_6143 - putative RNA polymerase, sigma-24 subunit, ECF subfamily

Analysis Tools

View alignment of region with nucmer

Design primers within region using Primer3Plus

View region in Artemis

Retrieve BCh11DRAFT_6143 nucleotide sequence in FASTA format

Retrieve BCh11DRAFT_6143 protein sequence in FASTA format

Retrieve BCh11DRAFT_6143 nucleotide sequence with 10 50 100 200 400 600 800 1000 2000 bp. flanking sequence
Include translation of coding sequence
Include complementary strand.

Run NCBI BLASTP PSI-BLAST against the Non-redundant protein sequences (nr) SwissProt Protein Data Bank (PDB) database using BCh11DRAFT_6143 protein sequence
(optional - restrict search to taxonomic group: root cellular organisms Bacteria Proteobacteria Betaproteobacteria Burkholderiales Burkholderiaceae Burkholderia )

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Annotation

Product:

putative RNA polymerase, sigma-24 subunit, ECF subfamily

GenBank ID: ZP_06844876.1

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