Type
|
Gene
|
Protein id
|
Locus
|
Product
|
Start pos
|
End pos
|
Strand
|
CDS |
maf4 |
ZP_07400798.1 |
HMPREF9399_0156 |
motility accessory factor |
1 |
480 |
-1 |
CDS |
pseI |
ZP_07400799.1 |
HMPREF9399_0157 |
pseudaminic acid synthase |
477 |
1508 |
-1 |
CDS |
- |
ZP_07400800.1 |
HMPREF9399_0158 |
flagellin modification protein |
1763 |
2899 |
1 |
CDS |
hisH |
ZP_07400801.1 |
HMPREF9399_0159 |
imidazole glycerol phosphate synthase subunit HisH |
2896 |
3501 |
1 |
CDS |
wbuZ |
ZP_07400802.1 |
HMPREF9399_0160 |
glycosyl amidation-associated protein WbuZ |
3502 |
4248 |
1 |
CDS |
pseH |
ZP_07400803.1 |
HMPREF9399_0161 |
pseudaminic acid biosynthesis N-acetyl transferase |
4213 |
4686 |
-1 |
CDS |
pseG |
ZP_07400804.1 |
HMPREF9399_0162 |
pseudaminic acid biosynthesis-associated protein PseG |
4683 |
5507 |
-1 |
CDS |
pseF |
ZP_07400805.1 |
HMPREF9399_0163 |
pseudaminic acid CMP-transferase |
5491 |
6189 |
-1 |
CDS |
- |
ZP_07400806.1 |
HMPREF9399_0164 |
hypothetical protein |
6269 |
7483 |
1 |
CDS |
- |
ZP_07400807.1 |
HMPREF9399_0165 |
hypothetical protein |
7499 |
8569 |
1 |
CDS |
acpP4 |
ZP_07400808.1 |
HMPREF9399_0166 |
acyl carrier protein |
8566 |
8793 |
-1 |
CDS |
- |
ZP_07400809.1 |
HMPREF9399_0167 |
amino acid adenylation domain protein |
8833 |
10341 |
-1 |
CDS |
- |
ZP_07400810.1 |
HMPREF9399_0168 |
hypothetical protein |
10402 |
11619 |
1 |
CDS |
- |
ZP_07400811.1 |
HMPREF9399_0169 |
acyl carrier protein |
11633 |
11854 |
-1 |
CDS |
fabH5 |
ZP_07400812.1 |
HMPREF9399_0170 |
beta-ketoacyl-acyl-carrier-protein synthase III |
11854 |
12915 |
-1 |
CDS |
- |
ZP_07400813.1 |
HMPREF9399_0171 |
HAD-superfamily phosphatase |
12905 |
14467 |
-1 |
CDS |
- |
ZP_07400814.1 |
HMPREF9399_0172 |
methyltransferase domain protein |
14467 |
15375 |
-1 |
CDS |
- |
ZP_07400815.1 |
HMPREF9399_0173 |
acyl carrier protein |
15369 |
15593 |
-1 |
CDS |
- |
ZP_07400816.1 |
HMPREF9399_0174 |
hypothetical protein |
15685 |
16428 |
1 |
CDS |
- |
ZP_07400817.1 |
HMPREF9399_0175 |
aminopeptidase domain containing protein |
16411 |
17358 |
-1 |
CDS |
- |
ZP_07400818.1 |
HMPREF9399_0176 |
hypothetical protein |
17531 |
17755 |
-1 |
CDS |
pseC |
ZP_07400819.1 |
HMPREF9399_0177 |
UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase |
17724 |
18854 |
-1 |
CDS |
pseB |
ZP_07400820.1 |
HMPREF9399_0178 |
UDP-N-acetylglucosamine 4,6-dehydratase |
18856 |
19860 |
-1 |
CDS |
dcd |
ZP_07400821.1 |
HMPREF9399_0179 |
dCTP deaminase |
19910 |
20470 |
-1 |
CDS |
- |
ZP_07400822.1 |
HMPREF9399_0180 |
hypothetical protein |
20431 |
20586 |
1 |
CDS |
accB |
ZP_07400823.1 |
HMPREF9399_0181 |
acetyl-CoA carboxylase biotin carboxyl carrier subunit |
20628 |
21083 |
1 |
CDS |
accC |
ZP_07400824.1 |
HMPREF9399_0182 |
acetyl-CoA carboxylase, biotin carboxylase |
21085 |
22416 |
1 |
CDS |
- |
ZP_07400825.1 |
HMPREF9399_0183 |
SurA domain protein |
22444 |
23259 |
-1 |
CDS |
gltX |
ZP_07400826.1 |
HMPREF9399_0184 |
glutamate--tRNA ligase |
23324 |
24715 |
1 |
CDS |
maeB |
ZP_07400827.1 |
HMPREF9399_0185 |
NADP-dependent malate dehydrogenase (oxaloacetate-decarboxylating) |
24715 |
25950 |
1 |
CDS |
upp |
ZP_07400828.1 |
HMPREF9399_0186 |
uracil phosphoribosyltransferase |
25947 |
26573 |
1 |
CDS |
- |
ZP_07400829.1 |
HMPREF9399_0187 |
hypothetical protein |
26579 |
27250 |
1 |
CDS |
- |
ZP_07400830.1 |
HMPREF9399_0188 |
Trk family potassium (K+) transporter, NAD+ binding protein |
27251 |
27901 |
-1 |
CDS |
ntpJ |
ZP_07400831.1 |
HMPREF9399_0189 |
H(+)-transporting two-sector ATPase |
27914 |
29269 |
-1 |
tRNA |
- |
- |
HMPREF9399_t0002 |
tRNA-Phe |
29398 |
29473 |
1 |
tRNA |
- |
- |
HMPREF9399_t0003 |
tRNA-Met |
29692 |
29767 |
-1 |
tRNA |
- |
- |
HMPREF9399_t0004 |
tRNA-Gln |
29799 |
29873 |
-1 |
CDS |
ribAB |
ZP_07400832.1 |
HMPREF9399_0190 |
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II |
29980 |
30999 |
1 |
CDS |
- |
ZP_07400833.1 |
HMPREF9399_0191 |
GatB/Yqey family protein |
31016 |
31459 |
1 |
CDS |
ilvB |
ZP_07400834.1 |
HMPREF9399_0192 |
acetolactate synthase large subunit |
31537 |
33237 |
1 |
CDS |
ilvH |
ZP_07400835.1 |
HMPREF9399_0193 |
acetolactate synthase small subunit |
33234 |
33698 |
1 |
CDS |
lpxD |
ZP_07400836.1 |
HMPREF9399_0194 |
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
33695 |
34648 |
1 |
CDS |
queA |
ZP_07400837.1 |
HMPREF9399_0195 |
S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
34651 |
35676 |
-1 |
CDS |
tatC |
ZP_07400838.1 |
HMPREF9399_0196 |
twin arginine-targeting protein translocase TatC |
35673 |
36419 |
-1 |
CDS |
tatB |
ZP_07400839.1 |
HMPREF9399_0197 |
Sec-independent protein translocase protein TatB |
36420 |
36824 |
-1 |
CDS |
- |
ZP_07400840.1 |
HMPREF9399_0198 |
possible coproporphyrinogen dehydrogenase |
36887 |
37954 |
-1 |
CDS |
nidH |
ZP_07400841.1 |
HMPREF9399_0199 |
dinucleoside polyphosphate hydrolase, invasion protein A |
38049 |
38519 |
1 |
CDS |
lysC |
ZP_07400842.1 |
HMPREF9399_0200 |
aspartate kinase |
38519 |
39721 |
1 |
CDS |
- |
ZP_07400843.1 |
HMPREF9399_0201 |
hypothetical protein |
39722 |
40255 |
1 |
CDS |
- |
ZP_07400844.1 |
HMPREF9399_0202 |
DNA polymerase III |
40255 |
40866 |
1 |
CDS |
folP |
ZP_07400845.1 |
HMPREF9399_0203 |
dihydropteroate synthase |
40863 |
42032 |
1 |
CDS |
ligA |
ZP_07400846.1 |
HMPREF9399_0204 |
NAD-dependent DNA ligase LigA |
42033 |
43976 |
1 |
CDS |
- |
ZP_07400847.1 |
HMPREF9399_0205 |
hypothetical protein |
43948 |
44334 |
1 |
CDS |
- |
ZP_07400848.1 |
HMPREF9399_0206 |
integral membrane protein |
44271 |
44960 |
1 |
CDS |
rrmJ |
ZP_07400849.1 |
HMPREF9399_0207 |
ribosomal RNA large subunit methyltransferase J |
44957 |
45706 |
1 |
CDS |
ribF |
ZP_07400850.1 |
HMPREF9399_0208 |
riboflavin biosynthesis protein RibF |
45675 |
46511 |
1 |
CDS |
- |
ZP_07400851.1 |
HMPREF9399_0209 |
S-adenosyl-L-methionine-dependent methyltransferase |
46515 |
47219 |
1 |
CDS |
- |
ZP_07400852.1 |
HMPREF9399_0210 |
lipoprotein |
47223 |
47462 |
-1 |
CDS |
- |
ZP_07400853.1 |
HMPREF9399_0211 |
integral membrane protein |
47520 |
48152 |
-1 |
CDS |
- |
ZP_07400854.1 |
HMPREF9399_0212 |
DNA/RNA non-specific endonuclease |
48162 |
48812 |
-1 |
CDS |
nth |
ZP_07400855.1 |
HMPREF9399_0213 |
endonuclease III |
48809 |
49435 |
-1 |
CDS |
prsA |
ZP_07400856.1 |
HMPREF9399_0214 |
peptidyl-prolyl cis-trans isomerase |
49518 |
50339 |
1 |
CDS |
fbaB |
ZP_07400857.1 |
HMPREF9399_0215 |
fructose-bisphosphate aldolase |
50339 |
51403 |
1 |
CDS |
- |
ZP_07400858.1 |
HMPREF9399_0216 |
probable membrane protein |
51502 |
52956 |
1 |
CDS |
- |
ZP_07400859.1 |
HMPREF9399_0217 |
chemotaxis protein MotB |
52953 |
53903 |
1 |
CDS |
- |
ZP_07400860.1 |
HMPREF9399_0218 |
D-cysteine desulfhydrase-like protein |
53913 |
54782 |
1 |
CDS |
ptpA |
ZP_07400861.1 |
HMPREF9399_0219 |
protein-tyrosine-phosphatase |
54784 |
55245 |
-1 |
CDS |
- |
ZP_07400862.1 |
HMPREF9399_0220 |
major facilitator family transporter |
55293 |
56477 |
1 |
CDS |
- |
ZP_07400863.1 |
HMPREF9399_0221 |
membrane protein |
56498 |
57154 |
1 |
CDS |
- |
ZP_07400864.1 |
HMPREF9399_0222 |
tautomerase |
57151 |
57360 |
-1 |
CDS |
- |
ZP_07400865.1 |
HMPREF9399_0223 |
membrane protein |
57607 |
57876 |
1 |
CDS |
- |
ZP_07400866.1 |
HMPREF9399_0224 |
T/U mismatch-specific DNA glycosylase |
57814 |
58302 |
-1 |
CDS |
pnp |
ZP_07400867.1 |
HMPREF9399_0225 |
polyribonucleotide nucleotidyltransferase |
58293 |
60509 |
-1 |
CDS |
- |
ZP_07400868.1 |
HMPREF9399_0226 |
hypothetical protein |
60526 |
62574 |
-1 |
CDS |
- |
ZP_07400869.1 |
HMPREF9399_0227 |
hypothetical protein |
62564 |
63016 |
-1 |
CDS |
purD |
ZP_07400870.1 |
HMPREF9399_0228 |
phosphoribosylamine-glycine ligase |
63013 |
64263 |
-1 |
CDS |
- |
ZP_07400871.1 |
HMPREF9399_0229 |
hypothetical protein |
64504 |
65964 |
-1 |
CDS |
- |
ZP_07400872.1 |
HMPREF9399_0230 |
ribosomal RNA adenine dimethylase domain protein |
66100 |
66657 |
1 |
CDS |
- |
ZP_07400873.1 |
HMPREF9399_0231 |
methyltransferase |
66780 |
67412 |
-1 |
CDS |
guaA |
ZP_07400874.1 |
HMPREF9399_0232 |
GMP synthase |
67563 |
69098 |
-1 |
CDS |
- |
ZP_07400875.1 |
HMPREF9399_0233 |
hypothetical protein |
69235 |
69711 |
1 |
CDS |
uvrC |
ZP_07400876.1 |
HMPREF9399_0234 |
excision endonuclease subunit UvrC |
69704 |
71518 |
1 |
CDS |
- |
ZP_07400877.1 |
HMPREF9399_0235 |
membrane protein |
71520 |
72713 |
1 |
CDS |
- |
ZP_07400878.1 |
HMPREF9399_0236 |
radical SAM domain protein |
72710 |
73612 |
-1 |
CDS |
hemE |
ZP_07400879.1 |
HMPREF9399_0237 |
uroporphyrinogen decarboxylase |
73609 |
74631 |
-1 |
CDS |
- |
ZP_07400880.1 |
HMPREF9399_0238 |
hypothetical protein |
74779 |
75186 |
-1 |
CDS |
- |
ZP_07400881.1 |
HMPREF9399_0239 |
hypothetical protein |
75332 |
75937 |
1 |
CDS |
pdxA |
ZP_07400882.1 |
HMPREF9399_0240 |
4-hydroxythreonine-4-phosphate dehydrogenase |
75921 |
77021 |
-1 |
CDS |
pdxJ |
ZP_07400883.1 |
HMPREF9399_0241 |
pyridoxine 5'-phosphate synthase |
77024 |
77791 |
-1 |
CDS |
ppx |
ZP_07400884.1 |
HMPREF9399_0242 |
exopolyphosphatase |
77847 |
78824 |
1 |
CDS |
- |
ZP_07400885.1 |
HMPREF9399_0243 |
hypothetical protein |
78870 |
79052 |
-1 |