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Clostridium difficile 630, complete genome. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS dnaA YP_001086464.1 CD0001 chromosomal replication initiator protein 1 1320 1
CDS dnaN YP_001086465.1 CD0002 DNA polymerase III subunit beta 1460 2668 1
CDS - YP_001086466.1 CD0003 putative RNA-binding mediating protein 2805 3011 1
CDS recF YP_001086467.1 CD0004 DNA replication and repair protein 3029 4144 1
CDS gyrB YP_001086468.1 CD0005 DNA gyrase subunit B 4145 6046 1
CDS gyrA YP_001086469.1 CD0006 DNA gyrase subunit A 6066 8492 1
CDS - YP_001086470.1 CD0007 hypothetical protein 8561 8857 1
CDS - YP_001086471.1 CD0008 hypothetical protein 8857 9117 1
CDS rsbV YP_001086472.1 CD0009 anti-sigma-B factor antagonist 9135 9446 1
CDS rsbW YP_001086473.1 CD0010 anti-sigma-B factor (serine-protein kinase) 9450 9857 1
CDS sigB YP_001086474.1 CD0011 RNA polymerase sigma-B factor 9857 10630 1
rRNA 16s_rRNA - CDr001 16S ribosomal RNA 10812 12318 1
tRNA tRNA-Ala - CDt001 tRNA-Ala 12372 12444 1
rRNA 23s_rRNA - CDr002 23S ribosomal RNA 12822 15720 1
rRNA 5s_rRNA - CDr003 5S ribosomal RNA 15839 15968 1
CDS - YP_001086475.1 CD0012 putative small-molecule-binding protein 16073 16600 1
CDS - YP_001086476.1 CD0013 putative mechanosensitive ion channel protein 16612 17493 1
CDS serS1 YP_001086477.1 CD0014 seryl-tRNA synthetase 17952 19223 1
CDS - YP_001086478.1 CD0015 putative cytosine/adenosine deaminase 19544 19999 1
tRNA tRNA-Ser - CDt002 tRNA-Ser 20000 20088 1
CDS dnaH YP_001086479.1 CD0016 DNA polymerase III subunits gamma and tau 20470 22107 1
CDS - YP_001086480.1 CD0017 hypothetical protein 22166 22516 1
CDS recD YP_001086481.1 CD0018 recombination protein 22529 23128 1
CDS - YP_001086482.1 CD0019 putative glycosyl transferase 23561 24766 -1
rRNA 16s_rRNA - CDr004 16S ribosomal RNA 25267 26773 1
rRNA 23s_rRNA - CDr005 23S ribosomal RNA 27034 29932 1
rRNA 5s_rRNA - CDr006 5S ribosomal RNA 30115 30233 1
tRNA tRNA-Asn - CDt003 tRNA-Asn 30237 30308 1
tRNA tRNA-Leu - CDt004 tRNA-Leu 30318 30403 1
tRNA tRNA-Met - CDt005 tRNA-Met 30419 30491 1
tRNA tRNA-Glu - CDt006 tRNA-Glu 30502 30573 1
tRNA tRNA-Gly - CDt007 tRNA-Gly 30586 30656 1
tRNA tRNA-Val - CDt008 tRNA-Val 30665 30737 1
tRNA tRNA-Asp - CDt009 tRNA-Asp 30746 30819 1
tRNA tRNA-Thr - CDt010 tRNA-Thr 30832 30903 1
tRNA tRNA-Tyr - CDt011 tRNA-Tyr 30921 31002 1
tRNA tRNA-Leu - CDt012 tRNA-Leu 31015 31095 1
tRNA tRNA-Arg - CDt013 tRNA-Arg 31128 31201 1
tRNA tRNA-Gln - CDt014 tRNA-Gln 31212 31284 1
tRNA tRNA-Ser - CDt015 tRNA-Ser 31375 31460 1
tRNA tRNA-Phe - CDt016 tRNA-Phe 31467 31539 1
tRNA tRNA-Met - CDt017 tRNA-Met 31549 31622 1
tRNA tRNA-Met - CDt018 tRNA-Met 31637 31710 1
tRNA tRNA-Pro - CDt019 tRNA-Pro 31737 31810 1
tRNA tRNA-His - CDt020 tRNA-His 31821 31894 1
tRNA tRNA-Lys - CDt021 tRNA-Lys 31906 31978 1
tRNA tRNA-Cys - CDt022 tRNA-Cys 31989 32059 1
tRNA tRNA-Asn - CDt023 tRNA-Asn 32069 32140 1
tRNA tRNA-Leu - CDt024 tRNA-Leu 32149 32234 1
tRNA tRNA-Met - CDt025 tRNA-Met 32250 32322 1
tRNA tRNA-Glu - CDt026 tRNA-Glu 32333 32404 1
tRNA tRNA-Gly - CDt027 tRNA-Gly 32417 32487 1
tRNA tRNA-Val - CDt028 tRNA-Val 32496 32568 1
tRNA tRNA-Asp - CDt029 tRNA-Asp 32577 32650 1
tRNA tRNA-Thr - CDt030 tRNA-Thr 32663 32734 1
tRNA tRNA-Tyr - CDt031 tRNA-Tyr 32752 32833 1
tRNA tRNA-Leu - CDt032 tRNA-Leu 32846 32926 1
tRNA tRNA-Gly - CDt033 tRNA-Gly 32953 33024 1
tRNA tRNA-Arg - CDt034 tRNA-Arg 33052 33125 1
tRNA tRNA-Gln - CDt035 tRNA-Gln 33138 33210 1
tRNA tRNA-Lys - CDt036 tRNA-Lys 33222 33294 1
tRNA tRNA-Ser - CDt037 tRNA-Ser 33300 33385 1
tRNA tRNA-Phe - CDt038 tRNA-Phe 33392 33464 1
tRNA tRNA-Met - CDt039 tRNA-Met 33474 33547 1
tRNA tRNA-Met - CDt040 tRNA-Met 33562 33635 1
tRNA tRNA-His - CDt041 tRNA-His 33656 33729 1
tRNA tRNA-Lys - CDt042 tRNA-Lys 33741 33813 1
tRNA tRNA-Cys - CDt043 tRNA-Cys 33824 33894 1
tRNA tRNA-Arg - CDt044 tRNA-Arg 33905 33978 1
tRNA tRNA-Val - CDt045 tRNA-Val 33994 34066 1
CDS - YP_001086483.1 CD0020 hypothetical protein 34145 34558 1
CDS pyc YP_001086484.1 CD0021 pyruvate carboxylase 34867 38298 1
CDS - YP_001086485.1 CD0022 putative translation elongation factor 38528 40468 1
CDS ctsR YP_001086486.1 CD0023 transcriptional regulator 40921 41385 1
CDS - YP_001086487.1 CD0024 putative DNA repair protein 41392 41886 1
CDS - YP_001086488.1 CD0025 ATP:guanido phosphotransferase 41902 42927 1
CDS clpC YP_001086489.1 CD0026 ATP-dependent Clp protease 42914 45361 1
CDS radA YP_001086490.1 CD0027 DNA repair protein RadA 45541 46914 1
CDS - YP_001086491.1 CD0028 DNA integrity scanning protein DisA 46917 47987 1
CDS - YP_001086492.1 CD0029 hypothetical protein 48076 49170 1
CDS - YP_001086493.1 CD0030 hypothetical protein 49299 51476 1
CDS - YP_001086494.1 CD0031 AraC family transcription regulator 51662 52507 -1
CDS - YP_001086495.1 CD0032 putative beta-glucosidase 52724 53890 1
CDS - YP_001086496.1 CD0033 putative beta-xylosidase 53912 55558 1
CDS - YP_001086497.1 CD0034 putative xylose transporter 55655 57028 1
CDS - YP_001086498.1 CD0035 transcriptional regulator 57469 58422 1
CDS acoA YP_001086499.1 CD0036 acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit 58454 59422 1
CDS acoB YP_001086500.1 CD0037 acetoin:2,6-dichlorophenolindophenol oxidoreductase beta subunit 59447 60433 1
CDS acoC YP_001086501.1 CD0038 E2 component of acetoin dehydrogenase enzyme system (dihydrolipoamide acetyltransferase) 60446 61492 1
CDS acoL YP_001086502.1 CD0039 E3 component of acetoin dehydrogenase enzyme system (dihydrolipoyl dehydrogenase) 61659 63389 1
CDS - YP_001086503.1 CD0040 putative transcription antiterminator 63807 66755 1
CDS - YP_001086504.1 CD0041 PTS system, IIA component 66733 67197 1
CDS - YP_001086505.1 CD0042 PTS system, IIB component 67277 67579 1
CDS - YP_001086506.1 CD0043 PTS system, IIC component 67656 69005 1
CDS - YP_001086507.1 CD0044 hypothetical protein 69040 69513 1
CDS - YP_001086508.1 CD0045 putative sugar-phosphate aldolase 69685 70335 1
CDS - YP_001086509.1 CD0046 putative lipoate-protein ligase 70509 71441 1
CDS ispD YP_001086510.1 CD0047 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 71715 72428 1
CDS ispF YP_001086511.1 CD0048 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 72425 72910 1
CDS proS YP_001086512.1 CD0049 prolyl-tRNA synthetase 73277 74992 1