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Clostridium difficile ATCC 43255, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05349389.1 CdifA_020200001428 putative phage regulatory protein 451 840 1
CDS - ZP_05349390.1 CdifA_020200001433 putative regulatory protein 933 1313 1
CDS - ZP_05349391.1 CdifA_020200001438 putative membrane-associated nucleotidase 1994 3424 1
CDS - ZP_05349392.1 CdifA_020200001443 LysR family transcriptional regulator 3572 4447 -1
CDS - ZP_05349393.1 CdifA_020200001448 chromate transporter 4567 5130 1
CDS - ZP_05349394.1 CdifA_020200001453 putative chromate transporter 5127 5693 1
CDS - ZP_05349395.1 CdifA_020200001458 putative DNA repair protein 6367 9795 -1
CDS - ZP_05349396.1 CdifA_020200001463 putative signaling protein 10113 12347 1
CDS - ZP_05349397.1 CdifA_020200001468 putative transcription antiterminator 12603 14633 1
CDS - ZP_05349398.1 CdifA_020200001473 PTS system, IIA component 14630 15082 1
CDS - ZP_05349399.1 CdifA_020200001478 putative fructose-like permease EIIC subunit 2 15084 16139 1
CDS - ZP_05349400.1 CdifA_020200001483 putative fructose-like phosphotransferase EIIB subunit 2 16206 16514 1
CDS - ZP_05349401.1 CdifA_020200001488 putative sugar-phosphate kinase 16618 17883 1
CDS - ZP_05349402.1 CdifA_020200001493 putative hydrolase 17971 18687 1
CDS - ZP_05349403.1 CdifA_020200001498 putative spore coat protein 18882 19175 -1
CDS - ZP_05349404.1 CdifA_020200001503 hypothetical protein 19181 19396 -1
CDS - ZP_05349405.1 CdifA_020200001508 transposase 19843 20241 1
CDS - ZP_05349406.1 CdifA_020200001513 transposase 20238 21401 1
CDS - ZP_05349407.1 CdifA_020200001518 putative nitroreductase 21785 22297 -1
CDS - ZP_05349408.1 CdifA_020200001523 phosphoribosylaminoimidazole carboxylase catalytic subunit 22747 23223 1
CDS - ZP_05349409.1 CdifA_020200001528 phosphoribosylaminoimidazole-succinocarboxamide synthase 23229 23927 1
CDS - ZP_05349410.1 CdifA_020200001533 amidophosphoribosyltransferase 23939 25306 1
CDS - ZP_05349411.1 CdifA_020200001538 phosphoribosylformylglycinamidine cyclo-ligase 25300 26376 1
CDS - ZP_05349412.1 CdifA_020200001543 phosphoribosylglycinamide formyltransferase 26370 26963 1
CDS purH ZP_05349413.1 CdifA_020200001548 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 26956 28488 1
CDS - ZP_05349414.1 CdifA_020200001553 phosphoribosylamine--glycine ligase 28499 29749 1
CDS - ZP_05349415.1 CdifA_020200001558 formylglycinamidine ribonucleotide synthetase 29774 33580 1
CDS - ZP_05349416.1 CdifA_020200001563 dTDP-4-dehydrorhamnose reductase, rfbD ortholog 33786 34658 1
CDS - ZP_05349417.1 CdifA_020200001568 glucose-1-phosphate thymidylyltransferase 34767 35636 1
CDS - ZP_05349418.1 CdifA_020200001573 dTDP-glucose 4,6-dehydratase 35685 37262 1
CDS - ZP_05349419.1 CdifA_020200001578 putative transglycosylase 37292 37960 1
CDS - ZP_05349420.1 CdifA_020200001583 hypothetical protein 37969 38397 1
CDS - ZP_05349421.1 CdifA_020200001588 flagellar motor switch protein 38421 38735 1
CDS - ZP_05349422.1 CdifA_020200001593 negative regulator of flagellin synthesis (anti-sigma-d factor) 38887 39162 1
CDS - ZP_05349423.1 CdifA_020200001598 putative flagellar biosynthesis protein 39167 39583 1
CDS - ZP_05349424.1 CdifA_020200001603 putative flagellar hook-associated protein 39601 40911 1
CDS - ZP_05349425.1 CdifA_020200001608 flagellar hook-associated protein 40930 41862 1
CDS - ZP_05349426.1 CdifA_020200001613 hypothetical protein 41881 42270 1
CDS - ZP_05349427.1 CdifA_020200001618 carbon storage regulator 42264 42476 1
CDS - ZP_05349428.1 CdifA_020200001623 flagellar protein FliS 42498 42893 1
CDS - ZP_05349429.1 CdifA_020200001628 flagellar protein 42893 43249 1
CDS - ZP_05349430.1 CdifA_020200001633 flagellar cap protein 43270 44793 1
CDS - ZP_05349431.1 CdifA_020200001638 hypothetical protein 44796 45131 1
CDS - ZP_05349432.1 CdifA_020200001643 flagellin subunit 45233 46105 1
CDS - ZP_05349433.1 CdifA_020200001648 putative glycosyltransferase 46198 48339 1
CDS - ZP_05349434.1 CdifA_020200001653 glycosyl transferase family protein 48363 50240 1
CDS - ZP_05349435.1 CdifA_020200001658 glycosyl transferase family protein 50233 52347 1
CDS - ZP_05349436.1 CdifA_020200001663 hypothetical protein 52356 53351 1
CDS - ZP_05349437.1 CdifA_020200001668 putative carbamoyl-phosphate synthase large chain 53443 54675 1
CDS - ZP_05349438.1 CdifA_020200001673 ornithine cyclodeaminase 54695 55639 1
CDS - ZP_05349439.1 CdifA_020200001678 hypothetical protein 55733 56140 1
CDS - ZP_05349440.1 CdifA_020200001683 Glutamine--scyllo-inositol transaminase 56227 57318 1
CDS - ZP_05349441.1 CdifA_020200001688 flagellar basal-body rod protein 58126 58443 1
CDS - ZP_05349442.1 CdifA_020200001693 flagellar basal-body rod protein 58451 58855 1
CDS - ZP_05349443.1 CdifA_020200001698 flagellar hook-basal body protein FliE 58865 59182 1
CDS fliF ZP_05349444.1 CdifA_020200001703 flagellar MS-ring protein 59207 60757 1
CDS - ZP_05349445.1 CdifA_020200001708 flagellar motor switch protein 60770 61840 1
CDS - ZP_05349446.1 CdifA_020200001713 flagellar assembly protein 61833 62564 1
CDS - ZP_05349447.1 CdifA_020200001718 flagellum-specific ATP synthase 62568 63887 1
CDS - ZP_05349448.1 CdifA_020200001723 flagellar protein 63924 64028 1
CDS - ZP_05349449.1 CdifA_020200001728 flagellar protein 64130 64363 1
CDS - ZP_05349450.1 CdifA_020200001733 putative flagellar hook-length control protein 64391 65596 1
CDS - ZP_05349451.1 CdifA_020200001738 putative basal-body rod modification protein 65614 66222 1
CDS - ZP_05349452.1 CdifA_020200001743 flagellar hook protein 66249 67244 1
CDS - ZP_05349453.1 CdifA_020200001748 putative flagellar protein 67257 67460 1
CDS - ZP_05349454.1 CdifA_020200001753 chemotaxis protein 67460 68278 1
CDS - ZP_05349455.1 CdifA_020200001758 chemotaxis protein 68268 68963 1
CDS - ZP_05349456.1 CdifA_020200001763 flagellar basal body-associated protein 68975 69418 1
CDS - ZP_05349457.1 CdifA_020200001768 putative flagellar protein 69433 69807 1
CDS - ZP_05349458.1 CdifA_020200001773 flagellar biosynthesis protein FliP 69808 70473 1
CDS - ZP_05349459.1 CdifA_020200001778 flagellar export protein 70486 70755 1
CDS - ZP_05349460.1 CdifA_020200001783 hypothetical protein 70748 70867 -1
CDS - ZP_05349461.1 CdifA_020200001788 bifunctional flagellar biosynthesis protein FliR/FlhB 70767 72581 1
CDS flhA ZP_05349462.1 CdifA_020200001793 flagellar biosynthesis protein FlhA 72590 74665 1
CDS flhF ZP_05349463.1 CdifA_020200001798 flagellar biosynthesis regulator FlhF 74640 75656 1
CDS - ZP_05349464.1 CdifA_020200001803 flagellar number regulator 75653 76531 1
CDS - ZP_05349465.1 CdifA_020200001808 RNA polymerase sigma factor for flagellar operon 76545 77246 1
CDS - ZP_05349466.1 CdifA_020200001813 hypothetical protein 77262 77684 1
CDS - ZP_05349467.1 CdifA_020200001818 hypothetical protein 77669 77854 1
CDS flgG ZP_05349468.1 CdifA_020200001823 flagellar basal body rod protein FlgG 77895 78668 1
CDS flgG ZP_05349469.1 CdifA_020200001828 flagellar basal body rod protein FlgG 78689 79450 1
CDS - ZP_05349470.1 CdifA_020200001833 putative flagellar motor switch protein 79473 80354 1
CDS - ZP_05349471.1 CdifA_020200001838 putative flagellar motor switch protein 80357 80731 1
CDS - ZP_05349472.1 CdifA_020200001843 hypothetical protein 80763 82166 1
CDS - ZP_05349473.1 CdifA_020200001848 heat shock protein 90 82281 84218 1
CDS - ZP_05349474.1 CdifA_020200001853 putative 1,3-propanediol dehydrogenase 84606 85736 1
CDS - ZP_05349475.1 CdifA_020200001858 spore photoproduct lyase 86014 86985 1
CDS - ZP_05349476.1 CdifA_020200001863 AraC family transcription regulator 87168 88079 1
CDS - ZP_05349477.1 CdifA_020200001868 hypothetical protein 88094 88510 1
CDS - ZP_05349478.1 CdifA_020200001873 putative transcriptional regulator 88610 89002 -1
CDS - ZP_05349479.1 CdifA_020200001878 hypothetical protein 89143 89538 1
CDS - ZP_05349480.1 CdifA_020200001883 hypothetical protein 89941 90147 1
CDS - ZP_05349481.1 CdifA_020200001888 putative hydrolase 90458 91201 -1
CDS - ZP_05349482.1 CdifA_020200001893 putative transcription antiterminator 91436 93934 1
CDS - ZP_05349483.1 CdifA_020200001898 PTS system, IIA component 94164 94568 1
CDS - ZP_05349484.1 CdifA_020200001903 PTS system, IIB component 94592 95089 1
CDS - ZP_05349485.1 CdifA_020200001908 putative PTS system, IIA component 95092 95493 1
CDS - ZP_05349486.1 CdifA_020200001913 PTS system, IIB component 95511 95999 1
CDS - ZP_05349487.1 CdifA_020200001918 PTS system, IIC component 96026 96781 1
CDS - ZP_05349488.1 CdifA_020200001923 PTS system, IID component 96781 97644 1