xBASE Logo
About | Contact | Home

Clostridium difficile ATCC 43255, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05349933.1 CdifA_020200004160 putative signaling protein 855 2525 1
CDS - ZP_05349934.1 CdifA_020200004165 pyruvate formate-lyase activating enzyme 2647 3381 -1
CDS - ZP_05349935.1 CdifA_020200004170 formate acetyltransferase 3541 5772 -1
CDS - ZP_05349936.1 CdifA_020200004175 Ca2+/Na+ antiporter 6130 7125 1
CDS - ZP_05349937.1 CdifA_020200004180 putative ATP-dependent RNA helicase 7216 8829 1
CDS - ZP_05349938.1 CdifA_020200004185 putative transcription antiterminator 9104 11089 1
CDS - ZP_05349939.1 CdifA_020200004190 glucitol operon activator protein 11094 11528 1
CDS - ZP_05349940.1 CdifA_020200004195 PTS system, glucitol/sorbitol-specific IIc2 component 11557 12117 1
CDS - ZP_05349941.1 CdifA_020200004200 PTS system, glucitol/sorbitol-specific IIB component 12181 12549 1
CDS - ZP_05349942.1 CdifA_020200004205 PTS system, glucitol/sorbitol-specific IIC component 12574 13140 1
CDS - ZP_05349943.1 CdifA_020200004210 PTS system, glucitol/sorbitol-specific IIA component 13181 13546 1
CDS - ZP_05349944.1 CdifA_020200004215 sorbitol-6-phosphate dehydrogenase 13647 14420 1
CDS - ZP_05349945.1 CdifA_020200004220 putative formate dehydrogenase 14769 17123 1
CDS - ZP_05349946.1 CdifA_020200004225 anti-sigma F factor antagonist 17211 17546 1
CDS - ZP_05349947.1 CdifA_020200004230 anti-sigma F factor 17560 17988 1
CDS - ZP_05349948.1 CdifA_020200004235 RNA polymerase sigma-F factor 18011 18775 1
CDS - ZP_05349949.1 CdifA_020200004240 stage V sporulation protein AC 19055 19492 1
CDS - ZP_05349950.1 CdifA_020200004245 stage V sporulation protein AD 19659 20672 1
CDS - ZP_05349951.1 CdifA_020200004250 stage V sporulation protein AE 20686 21048 1
CDS - ZP_05349952.1 CdifA_020200004255 LacI family transcriptional regulator 21231 22247 1
CDS - ZP_05349953.1 CdifA_020200004260 hypothetical protein 22622 23464 1
CDS - ZP_05349954.1 CdifA_020200004265 hypothetical protein 23479 23943 1
CDS - ZP_05349955.1 CdifA_020200004270 putative amidohydrolase 23957 25102 1
CDS - ZP_05349956.1 CdifA_020200004275 hypothetical protein 25146 26081 1
CDS - ZP_05349957.1 CdifA_020200004280 penicillin-binding protein 26355 29048 -1
CDS - ZP_05349958.1 CdifA_020200004285 hypothetical protein 29262 29960 1
CDS - ZP_05349959.1 CdifA_020200004290 putative stage IV sporulation protein 30171 31178 -1
CDS - ZP_05349960.1 CdifA_020200004295 putative N-acetylmuramoyl-L-alanine amidase 31406 32290 1
CDS - ZP_05349961.1 CdifA_020200004300 ABC transporter, ATP-binding protein 32492 34042 1
CDS - ZP_05349962.1 CdifA_020200004305 hypothetical protein 34071 34718 1
CDS - ZP_05349963.1 CdifA_020200004310 putative metal-binding protein 34860 35120 -1
CDS - ZP_05349964.1 CdifA_020200004315 putative ATP/GTP-binding protein 35326 36609 1
CDS - ZP_05349965.1 CdifA_020200004320 hypothetical protein 36617 37294 1
CDS - ZP_05349966.1 CdifA_020200004325 NUDIX family hydrolase 37380 37823 1
CDS - ZP_05349967.1 CdifA_020200004330 hypothetical protein 38128 38772 1
CDS - ZP_05349968.1 CdifA_020200004335 hypothetical protein 38920 39234 -1
CDS - ZP_05349969.1 CdifA_020200004340 hypothetical protein 39234 39620 -1
CDS - ZP_05349970.1 CdifA_020200004345 NH3-dependent NAD(+) synthetase 39799 40554 1
CDS - ZP_05349971.1 CdifA_020200004350 hypothetical protein 40637 41356 1
CDS - ZP_05349972.1 CdifA_020200004355 LacI family transcriptional regulator 41523 42527 -1
CDS - ZP_05349973.1 CdifA_020200004360 putative hydroxymethylglutaryl-CoA lyase 42793 43689 1
CDS - ZP_05349974.1 CdifA_020200004365 hypothetical protein 43827 45089 1
CDS - ZP_05349975.1 CdifA_020200004370 putative beta-alanine CoA-transferase 45165 46358 1
CDS - ZP_05349976.1 CdifA_020200004375 3-hydroxybutyryl-CoA dehydratase (crotonase) 46987 47781 1
CDS - ZP_05349977.1 CdifA_020200004380 permease 47876 49216 1
CDS - ZP_05349978.1 CdifA_020200004385 putative CoA-transferase 49353 50585 1
CDS - ZP_05349979.1 CdifA_020200004390 putative acyl-CoA dehydrogenase 50625 51767 1
CDS - ZP_05349980.1 CdifA_020200004395 electron transfer flavoprotein beta-subunit 51778 52572 1
CDS - ZP_05349981.1 CdifA_020200004400 electron transfer flavoprotein alpha-subunit 52586 53605 1
CDS - ZP_05349982.1 CdifA_020200004405 putative sigma-54-dependent transcriptional regulator 53704 55080 1
CDS - ZP_05349983.1 CdifA_020200004410 hypothetical protein 55412 55756 -1
CDS - ZP_05349984.1 CdifA_020200004415 hypothetical protein 56244 57254 1
CDS - ZP_05349985.1 CdifA_020200004420 putative flavodoxin 57390 57878 1
CDS - ZP_05349986.1 CdifA_020200004425 putative signaling protein 58054 59982 1
CDS - ZP_05349987.1 CdifA_020200004430 putative universal stress protein 60159 60569 1
CDS - ZP_05349988.1 CdifA_020200004435 putative PTS system, IIB component 60591 60893 1
CDS - ZP_05349989.1 CdifA_020200004440 GntR family transcriptional regulator 61110 61802 -1
CDS - ZP_05349990.1 CdifA_020200004445 transporter 61828 63015 -1
CDS - ZP_05349991.1 CdifA_020200004450 PTS system, IIABC component 63349 65226 1
CDS - ZP_05349992.1 CdifA_020200004455 putative 6-phospho-beta-glucosidase 65581 66987 1
CDS - ZP_05349993.1 CdifA_020200004460 putative transcription antiterminator 67015 67863 1
CDS - ZP_05349994.1 CdifA_020200004465 two-component response regulator 68524 69216 1
CDS - ZP_05349995.1 CdifA_020200004470 two-component sensor histidine kinase 69219 70148 1
CDS - ZP_05349996.1 CdifA_020200004475 putative lantibiotic ABC transporter,ATP-binding protein 70296 71219 1
CDS - ZP_05349997.1 CdifA_020200004480 putative lantibiotic ABC transporter, permease protein 71212 71973 1
CDS - ZP_05349998.1 CdifA_020200004485 putative lantibiotic ABC transporter, permease protein 71983 72765 1
CDS - ZP_05349999.1 CdifA_020200004490 rubrerythrin 73142 73678 1
CDS - ZP_05350000.1 CdifA_020200004495 putative oxidative stress regulatory protein 73710 74099 1
CDS - ZP_05350001.1 CdifA_020200004500 rubredoxin oxidoreductase (desulfoferrodoxin) 74136 74522 1
CDS - ZP_05350002.1 CdifA_020200004505 putative oxidative stress protein 74649 76091 1
CDS - ZP_05350003.1 CdifA_020200004510 metallo-beta-lactamase superfamily protein 76388 77203 1
CDS - ZP_05350004.1 CdifA_020200004515 hypothetical protein 77783 78967 1
CDS - ZP_05350005.1 CdifA_020200004520 putative ATP-dependent RNA helicase 79344 80471 -1
CDS aksA ZP_05350006.1 CdifA_020200004525 trans-homoaconitate synthase 80916 82109 1
CDS - ZP_05350007.1 CdifA_020200004530 aconitate hydratase 82134 84059 1
CDS - ZP_05350008.1 CdifA_020200004535 putative isocitrate/3-isopropylmalate dehydrogenase 84081 85076 1
CDS - ZP_05350009.1 CdifA_020200004540 MarR family transcriptional regulator 85426 85875 1
CDS - ZP_05350010.1 CdifA_020200004545 putative acetyltransferase 85909 86403 1
CDS - ZP_05350011.1 CdifA_020200004550 putative reductase 86500 87021 1
CDS - ZP_05350012.1 CdifA_020200004555 putative DNA-binding protein 87210 87521 1
CDS - ZP_05350013.1 CdifA_020200004560 putative membrane-associated CAAX amino terminal protease 87549 88235 1
CDS - ZP_05350014.1 CdifA_020200004565 putative hydrolase 88467 89351 1
CDS - ZP_05350015.1 CdifA_020200004570 5-aminoimidazole-4-carboxamide ribonucleotide transformylase 89450 90625 1
CDS - ZP_05350016.1 CdifA_020200004575 hypothetical protein 90753 91607 1
CDS - ZP_05350017.1 CdifA_020200004580 putative glycosyl transferase 91651 92886 1
CDS - ZP_05350018.1 CdifA_020200004585 cell surface protein 92987 93928 1
CDS - ZP_05350019.1 CdifA_020200004590 putative nuclease 94147 94500 -1
CDS - ZP_05350020.1 CdifA_020200004595 hypothetical protein 94796 95707 1
CDS - ZP_05350021.1 CdifA_020200004600 hypothetical protein 95968 96402 1
CDS - ZP_05350022.1 CdifA_020200004605 hypothetical protein 96425 97960 1
CDS - ZP_05350023.1 CdifA_020200004610 putative aminobenzoyl-glutamate utilization protein 98044 99411 1
CDS - ZP_05350024.1 CdifA_020200004615 hypothetical protein 99446 99670 1
CDS - ZP_05350025.1 CdifA_020200004620 hypothetical protein 99844 99948 1
CDS - ZP_05350026.1 CdifA_020200004625 hypothetical protein 100120 100518 -1
CDS - ZP_05350027.1 CdifA_020200004630 MarR family transcriptional regulator 100521 100955 -1
CDS - ZP_05350028.1 CdifA_020200004635 oligopeptide ABC transporter, permease protein 101282 102268 1
CDS - ZP_05350029.1 CdifA_020200004640 oligopeptide ABC transporter, permease protein 102252 103163 1
CDS - ZP_05350030.1 CdifA_020200004645 oligopeptide ABC transporter, substrate-binding lipoprotein 103276 104844 1
CDS - ZP_05350031.1 CdifA_020200004650 oligopeptide ABC transporter, ATP-binding protein 104919 105944 1
CDS - ZP_05350032.1 CdifA_020200004655 ABC-type oligopeptide transport system, ATPase component 105937 106881 1