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Clostridium difficile ATCC 43255, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05350745.1 CdifA_020200008277 hypothetical protein 34 1380 1
CDS - ZP_05350746.1 CdifA_020200008282 hypothetical protein 1380 1559 1
CDS - ZP_05350747.1 CdifA_020200008287 hypothetical protein 1600 1830 1
CDS - ZP_05350748.1 CdifA_020200008292 phage holin 1850 2107 1
CDS - ZP_05350749.1 CdifA_020200008297 phage AbiD protein 2368 3231 1
CDS - ZP_05350750.1 CdifA_020200008302 N-acetylmuramoyl-L-alanine amidase (cell wall hydrolase) (partial) region relative to most database matches. 3310 4122 1
CDS - ZP_05350751.1 CdifA_020200008307 cell surface protein (putative penicillin-binding protein) 4409 6418 1
CDS - ZP_05350752.1 CdifA_020200008312 putative PemI 6463 6648 -1
CDS - ZP_05350753.1 CdifA_020200008317 hypothetical protein 6877 7005 -1
CDS - ZP_05350754.1 CdifA_020200008322 putative manganese-containing catalase 7373 8050 1
CDS - ZP_05350755.1 CdifA_020200008327 hypothetical protein 8224 10260 1
CDS - ZP_05350756.1 CdifA_020200008332 MarR family transcriptional regulator 10451 11017 -1
CDS - ZP_05350757.1 CdifA_020200008337 putative lysophospholipase 11305 12240 1
CDS - ZP_05350758.1 CdifA_020200008342 putative transcriptional regulator 12705 13919 1
CDS - ZP_05350759.1 CdifA_020200008347 hypothetical protein 14339 14860 -1
CDS - ZP_05350760.1 CdifA_020200008352 hypothetical protein 15216 16013 1
CDS - ZP_05350761.1 CdifA_020200008357 putative arylesterase 16123 16713 1
CDS - ZP_05350762.1 CdifA_020200008362 putative phosphoglucomutase 16779 18476 1
CDS - ZP_05350763.1 CdifA_020200008367 putative membrane-associated ribonuclease 18690 19529 1
CDS - ZP_05350764.1 CdifA_020200008372 putative two-component histidine kinase 20046 21902 1
CDS - ZP_05350765.1 CdifA_020200008377 homoserine dehydrogenase 22611 23828 1
CDS - ZP_05350766.1 CdifA_020200008382 hypothetical protein 23945 24427 1
CDS - ZP_05350767.1 CdifA_020200008387 histidinol dehydrogenase 24692 25957 1
CDS - ZP_05350768.1 CdifA_020200008392 hypothetical protein 26159 26911 -1
CDS - ZP_05350769.1 CdifA_020200008397 hypothetical protein 27029 27298 -1
CDS - ZP_05350770.1 CdifA_020200008402 putative sugar metabolism repressor 27773 28867 1
CDS - ZP_05350771.1 CdifA_020200008407 putative N-acetylglucosamine kinase 28869 29819 1
CDS - ZP_05350772.1 CdifA_020200008412 hypothetical protein 29812 30996 1
CDS - ZP_05350773.1 CdifA_020200008417 putative ribose ABC transporter, ATP-binding protein 31009 32505 1
CDS - ZP_05350774.1 CdifA_020200008422 putative ribose ABC transporter, permease protein 32528 33478 1
CDS - ZP_05350775.1 CdifA_020200008427 putative ribose ABC transporter,substrate-binding lipoprotein 33499 34461 1
CDS - ZP_05350776.1 CdifA_020200008432 hypothetical protein 34833 35465 1
CDS - ZP_05350777.1 CdifA_020200008437 hypothetical protein 35772 35867 1
CDS - ZP_05350778.1 CdifA_020200008442 potassium-transporting ATPase subunit A 36015 37691 1
CDS - ZP_05350779.1 CdifA_020200008457 potassium-transporting ATPase subunit C 39793 40419 1
CDS - ZP_05350780.1 CdifA_020200008462 putative O-acetylserine sulfhydrylase 40656 41564 1
CDS - ZP_05350781.1 CdifA_020200008467 serine acetyltransferase 41591 42181 1
CDS - ZP_05350782.1 CdifA_020200008472 ferredoxin 42341 42529 1
CDS - ZP_05350783.1 CdifA_020200008477 methionine aminopeptidase 42583 43452 -1
CDS - ZP_05350784.1 CdifA_020200008482 hypothetical protein 43649 44893 -1
CDS - ZP_05350785.1 CdifA_020200008487 putative endonuclease 45184 45495 1
CDS - ZP_05350786.1 CdifA_020200008492 putative phosphomethylpyrimidine kinase 45780 46574 1
CDS - ZP_05350787.1 CdifA_020200008497 hydroxyethylthiazole kinase 46598 47386 1
CDS - ZP_05350788.1 CdifA_020200008502 thiamine-phosphate pyrophosphorylase 47409 48041 1
CDS - ZP_05350789.1 CdifA_020200008507 PTS system, IIB component 48180 48482 1
CDS - ZP_05350790.1 CdifA_020200008512 ABC transporter, permease protein 48548 49297 -1
CDS - ZP_05350791.1 CdifA_020200008517 ABC transporter, ATP-binding protein 49291 50253 -1
CDS - ZP_05350792.1 CdifA_020200008522 hypothetical protein 50257 50715 -1
CDS - ZP_05350793.1 CdifA_020200008527 GntR family transcriptional regulator 51071 51427 1
CDS - ZP_05350794.1 CdifA_020200008532 ABC transporter, ATP-binding protein 51499 52215 1
CDS - ZP_05350795.1 CdifA_020200008537 putative ABC transporter, permease protein 52208 53032 1
CDS - ZP_05350796.1 CdifA_020200008542 hypothetical protein 53044 54243 1
CDS - ZP_05350797.1 CdifA_020200008547 hypothetical protein 54252 55064 1
CDS - ZP_05350798.1 CdifA_020200008552 hypothetical protein 55075 55815 1
CDS - ZP_05350799.1 CdifA_020200008557 putative signaling protein 56122 57654 1
CDS - ZP_05350800.1 CdifA_020200008562 GntR family transcriptional regulator 57830 58198 1
CDS - ZP_05350801.1 CdifA_020200008567 ABC transporter, ATP-binding protein 58200 58925 1
CDS - ZP_05350802.1 CdifA_020200008572 putative ABC transporter, peremase protein 58919 59683 1
CDS - ZP_05350803.1 CdifA_020200008577 putative permease 59905 61155 1
CDS - ZP_05350804.1 CdifA_020200008582 putative mechanosensitive ion channel protein 61346 62230 1
CDS - ZP_05350805.1 CdifA_020200008587 putative lipoprotein 62592 63209 1
CDS - ZP_05350806.1 CdifA_020200008592 putative nitric oxide reductase flavoprotein 63317 65848 1
CDS - ZP_05350807.1 CdifA_020200008597 two-component response regulator 66282 66983 1
CDS - ZP_05350808.1 CdifA_020200008602 two-component sensor histidine kinase 66973 68115 1
CDS - ZP_05350809.1 CdifA_020200008607 putative D-alanine:D-alanine ligase (putative vancomycin/teicoplanin A-type resistance protein) 68376 69476 1
CDS - ZP_05350810.1 CdifA_020200008612 putative D-alanyl-D-alanine carboxypeptidase 69473 70279 1
CDS - ZP_05350811.1 CdifA_020200008617 serine/alanine racemase 70297 72435 1
CDS - ZP_05350812.1 CdifA_020200008622 hypothetical protein 72749 73369 1
CDS - ZP_05350813.1 CdifA_020200008627 putative membrane-associated metal-dependent hydrolase 73535 74071 -1
CDS - ZP_05350814.1 CdifA_020200008632 superoxide dismutase (Mn) 74184 74888 -1
CDS - ZP_05350815.1 CdifA_020200008637 asparagine synthetase 75061 76935 1
CDS - ZP_05350816.1 CdifA_020200008642 putative serine protease 77027 78463 -1
CDS - ZP_05350817.1 CdifA_020200008647 tellurium resistance protein 78792 79370 1
CDS - ZP_05350818.1 CdifA_020200008652 tellurium resistance protein 79409 79987 1
CDS - ZP_05350819.1 CdifA_020200008657 tellurium resistance protein 80073 80702 1
CDS - ZP_05350820.1 CdifA_020200008662 putative calcium-transporting ATPase 80692 83451 1
CDS - ZP_05350821.1 CdifA_020200008667 hypothetical protein 83538 85100 1
CDS - ZP_05350822.1 CdifA_020200008672 putative tellurite resistance protein 85101 86237 1
CDS - ZP_05350823.1 CdifA_020200008677 hypothetical protein 86301 87377 1
CDS - ZP_05350824.1 CdifA_020200008682 hypothetical protein 87355 88593 1
CDS - ZP_05350825.1 CdifA_020200008687 hypothetical protein 88647 89735 1
CDS - ZP_05350826.1 CdifA_020200008692 hypothetical protein 89763 90554 1
CDS - ZP_05350827.1 CdifA_020200008697 putative transcriptional regulator 90669 91223 -1
CDS - ZP_05350828.1 CdifA_020200008702 hypothetical protein 91418 92620 1
CDS - ZP_05350829.1 CdifA_020200008707 putative dipeptidase 92695 93675 1
CDS - ZP_05350830.1 CdifA_020200008712 putative iron compound ABC transporter, permease protein 93921 94874 1
CDS - ZP_05350831.1 CdifA_020200008717 putative iron compound ABC transporter, permease protein 94864 95820 1
CDS - ZP_05350832.1 CdifA_020200008722 putative iron compound ABC transporter,ATP-binding protein 95817 96572 1
CDS - ZP_05350833.1 CdifA_020200008727 putative iron compound ABC transporter,substrate-binding protein 96664 97629 1
CDS - ZP_05350834.1 CdifA_020200008732 putative signaling protein 98111 99970 1
CDS - ZP_05350835.1 CdifA_020200008737 putative tellurium resistance protein 100262 100861 -1
CDS - ZP_05350836.1 CdifA_020200008742 putative lipoprotein 100964 101761 -1
CDS - ZP_05350837.1 CdifA_020200008747 putative lipoate-protein ligase 102071 103057 -1
CDS - ZP_05350838.1 CdifA_020200008752 putative Na+/H+ antiporter 103541 105271 1
tRNA - - CdifA_020200t14294 tRNA-Leu 105381 105461 1
CDS - ZP_05350839.1 CdifA_020200008757 hypothetical protein 105796 106311 1
CDS - ZP_05350840.1 CdifA_020200008762 putative bi-functional glycine dehydrogenase/aminomethyl transferase protein 107101 109575 1
CDS - ZP_05350841.1 CdifA_020200008767 glycine dehydrogenase subunit 2 109575 111032 1
CDS - ZP_05350842.1 CdifA_020200008772 cation-transporting ATPase 111450 113807 1
CDS - ZP_05350843.1 CdifA_020200008777 hypothetical protein 113893 114210 -1