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Clostridium difficile ATCC 43255, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_05352618.1 CdifA_020200017786 putative siroheme synthase 50 628 -1
CDS - ZP_05352619.1 CdifA_020200017791 delta-aminolevulinic acid dehydratase 781 1746 -1
CDS - ZP_05352620.1 CdifA_020200017796 porphyrin biosynthesis protein 1763 3262 -1
CDS hemC ZP_05352621.1 CdifA_020200017801 porphobilinogen deaminase 3252 4157 -1
CDS - ZP_05352622.1 CdifA_020200017806 sirohydrochlorin cobaltochelatase 4187 5665 -1
CDS - ZP_05352623.1 CdifA_020200017811 cobalt-precorrin-6a reductase 5684 6436 -1
CDS - ZP_05352624.1 CdifA_020200017816 cobalt-precorrin-3b c(17)-methyltransferase 6433 7158 -1
CDS - ZP_05352625.1 CdifA_020200017821 cobalamin biosynthesis protein CbiG 7155 8276 -1
CDS - ZP_05352626.1 CdifA_020200017826 precorrin-4 C(11)-methyltransferase 8260 9012 -1
CDS - ZP_05352627.1 CdifA_020200017831 cobalt-precorrin-6Y C(15)-methyltransferase 9005 9580 -1
CDS - ZP_05352628.1 CdifA_020200017836 cobalt-precorrin-6Y C(5)-methyltransferase 9570 10178 -1
CDS cbiD ZP_05352629.1 CdifA_020200017841 cobalt-precorrin-6A synthase 10175 11401 -1
CDS cbiC ZP_05352630.1 CdifA_020200017846 cobalt-precorrin-8X methylmutase 11410 12042 -1
CDS - ZP_05352631.1 CdifA_020200017851 putative cobalamin biosynthesis kinase 12030 12917 -1
CDS - ZP_05352632.1 CdifA_020200017856 pthreonine-phosphate decarboxylase 12919 13989 -1
CDS - ZP_05352633.1 CdifA_020200017861 cobalamin biosynthesis protein 14021 14992 -1
CDS - ZP_05352634.1 CdifA_020200017866 cobyrinic acid a,c-diamide synthase 14993 16369 -1
CDS - ZP_05352635.1 CdifA_020200017871 cobyric acid synthase 16408 17922 -1
CDS - ZP_05352636.1 CdifA_020200017876 putative cobalamin biosynthesis phosphoglycerate mutase 18283 18897 -1
CDS - ZP_05352637.1 CdifA_020200017881 cobalamin synthase 18917 19690 -1
CDS - ZP_05352638.1 CdifA_020200017886 bifunctional adenosylcobalamin biosynthesis protein 19700 20260 -1
CDS - ZP_05352639.1 CdifA_020200017891 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 20292 21338 -1
CDS - ZP_05352640.1 CdifA_020200017896 hypothetical protein 21558 21749 1
CDS - ZP_05352641.1 CdifA_020200017901 hypothetical protein 21790 21909 -1
CDS - ZP_05352642.1 CdifA_020200017906 putative aldose epimerase 22143 23015 1
CDS - ZP_05352643.1 CdifA_020200017911 putative aminotransferas 23212 24399 -1
CDS - ZP_05352644.1 CdifA_020200017916 putative peptidase 24404 25474 -1
CDS - ZP_05352645.1 CdifA_020200017921 PTS system, IIC component 25484 26806 -1
CDS - ZP_05352646.1 CdifA_020200017926 PTS system, IIB component 26838 27173 -1
CDS - ZP_05352647.1 CdifA_020200017931 PTS system, IIA component 27270 27575 -1
CDS - ZP_05352648.1 CdifA_020200017936 exoaminopeptidase 27590 28633 -1
CDS - ZP_05352649.1 CdifA_020200017951 tagatose-bisphosphate aldolase 30863 31714 -1
CDS - ZP_05352650.1 CdifA_020200017956 putative tagatose-6-phosphate ketose/aldose isomerase 31763 32926 -1
CDS - ZP_05352651.1 CdifA_020200017961 putative oxidoreductase 33403 34320 1
CDS - ZP_05352652.1 CdifA_020200017966 putative tagatose-6-phosphate kinase 34449 35378 -1
CDS - ZP_05352653.1 CdifA_020200017971 GntR family transcriptional regulator 35647 36372 1
CDS - ZP_05352654.1 CdifA_020200017976 N-acetylglucosamine-6-phosphate deacetylase 36455 37609 1
CDS - ZP_05352655.1 CdifA_020200017981 putative regulatory protein 38155 38637 -1
CDS - ZP_05352656.1 CdifA_020200017986 putative exported carboxy-terminal processing protease 39241 40389 -1
CDS - ZP_05352657.1 CdifA_020200017991 putative 5-formyltetrahydrofolate cyclo-ligase 40552 41121 1
CDS - ZP_05352658.1 CdifA_020200017996 hypothetical protein 41303 41719 -1
CDS - ZP_05352659.1 CdifA_020200018001 hypothetical protein 41945 43039 -1
CDS - ZP_05352660.1 CdifA_020200018006 transketolase, pyridine binding subunit 43462 44403 -1
CDS - ZP_05352661.1 CdifA_020200018011 transketolase, thiamine disphosphate-binding subunit 44396 45223 -1
CDS - ZP_05352662.1 CdifA_020200018016 putative regulator of cell growth 45394 45756 -1
CDS - ZP_05352663.1 CdifA_020200018021 CopG-family transcriptional regulator 45746 46033 -1
CDS - ZP_05352664.1 CdifA_020200018026 alanine racemase 46066 47223 -1
CDS - ZP_05352665.1 CdifA_020200018031 putative lipoprotein 47238 47828 -1
CDS - ZP_05352666.1 CdifA_020200018036 hypothetical protein 47849 48310 -1
CDS acpS ZP_05352667.1 CdifA_020200018041 4'-phosphopantetheinyl transferase 48325 48705 -1
CDS - ZP_05352668.1 CdifA_020200018046 ATP synthase epsilon chain (partial) 49167 49427 -1
CDS - ZP_05352669.1 CdifA_020200018051 F0F1 ATP synthase subunit beta 49430 50824 -1
CDS - ZP_05352670.1 CdifA_020200018056 ATP synthase subunit gamma 50837 51715 -1
CDS - ZP_05352671.1 CdifA_020200018061 ATP synthase alpha chain 51743 53245 -1
CDS - ZP_05352672.1 CdifA_020200018066 ATP synthase subunit delta 53262 53807 -1
CDS - ZP_05352673.1 CdifA_020200018071 ATP synthase B chain 53804 54301 -1
CDS - ZP_05352674.1 CdifA_020200018076 F0F1 ATP synthase subunit C 54424 54684 -1
CDS - ZP_05352675.1 CdifA_020200018081 ATP synthase A chain 54753 55457 -1
CDS - ZP_05352676.1 CdifA_020200018086 ATP synthase protein I 55460 55846 -1
CDS - ZP_05352677.1 CdifA_020200018091 putative ATP synthase protein 55851 56078 -1
CDS - ZP_05352678.1 CdifA_020200018096 putative cytidine and deoxycytidylate deaminase 56263 56700 -1
CDS - ZP_05352679.1 CdifA_020200018101 hypothetical protein 56926 57741 -1
CDS - ZP_05352680.1 CdifA_020200018106 uracil phosphoribosyltransferase 58042 58671 -1
CDS - ZP_05352681.1 CdifA_020200018111 ribose-5-phosphate isomerase 2 58707 59159 -1
CDS - ZP_05352682.1 CdifA_020200018116 low molecular weight protein-tyrosine-phosphatase 59176 59625 -1
CDS - ZP_05352683.1 CdifA_020200018121 hypothetical protein 59642 60682 -1
CDS - ZP_05352684.1 CdifA_020200018126 putative zinc transporter 60711 61391 -1
CDS prfA ZP_05352685.1 CdifA_020200018131 peptide chain release factor 1 61520 62584 -1
CDS - ZP_05352686.1 CdifA_020200018136 protein methyltransferase 62628 63476 -1
CDS - ZP_05352687.1 CdifA_020200018141 hypothetical protein 63494 64387 -1
CDS - ZP_05352688.1 CdifA_020200018146 50S ribosomal protein L31 64532 64732 -1
CDS rho ZP_05352689.1 CdifA_020200018151 transcription termination factor Rho 64885 66474 -1
CDS - ZP_05352690.1 CdifA_020200018156 UTP--glucose-1-phosphate uridylyltransferase 66988 67953 -1
CDS - ZP_05352691.1 CdifA_020200018161 putative oligopeptidase 68067 69959 -1
CDS - ZP_05352692.1 CdifA_020200018166 stage II sporulation protein e 70310 72682 -1
CDS - ZP_05352693.1 CdifA_020200018171 putative exopolyphosphatase 72772 73692 -1
CDS - ZP_05352694.1 CdifA_020200018176 putative septum formation protein 73805 74089 -1
CDS - ZP_05352695.1 CdifA_020200018181 hypothetical protein 74095 74628 -1
CDS - ZP_05352696.1 CdifA_020200018186 hypothetical protein 74629 74883 -1
CDS - ZP_05352697.1 CdifA_020200018191 putative RNA-binding protein 74945 75187 -1
CDS - ZP_05352698.1 CdifA_020200018196 DNA-binding protein HU 75259 75537 -1
CDS - ZP_05352699.1 CdifA_020200018201 bifunctional protein 75626 77074 -1
CDS - ZP_05352700.1 CdifA_020200018206 stage V sporulation protein B 77181 78794 -1
CDS - ZP_05352701.1 CdifA_020200018211 stage V sporulation protein T 78914 79453 -1
CDS - ZP_05352702.1 CdifA_020200018216 putative foldase lipoprotein (late stage protein export lipoprotein) 79577 80572 -1
CDS - ZP_05352703.1 CdifA_020200018221 transcription-repair coupling factor 80603 83989 -1
CDS - ZP_05352704.1 CdifA_020200018226 peptidyl-tRNA hydrolase 84006 84566 -1
CDS - ZP_05352705.1 CdifA_020200018231 putative type IV prepilin leader peptidase 84580 85230 -1
CDS - ZP_05352706.1 CdifA_020200018236 putative type IV prepilin leader peptidase 85332 86114 -1
CDS - ZP_05352707.1 CdifA_020200018241 putative type IV pilus retraction protein (putative twitching mobility protein) 86095 87177 -1
CDS - ZP_05352708.1 CdifA_020200018246 hypothetical protein 87273 88811 -1
CDS - ZP_05352709.1 CdifA_020200018251 putative type IV pilin 88832 89359 -1
CDS - ZP_05352710.1 CdifA_020200018256 putative type IV pilin 89396 89956 -1
CDS - ZP_05352711.1 CdifA_020200018261 putative type IV pilus assembly protein 89989 90897 -1
CDS - ZP_05352712.1 CdifA_020200018266 putaive membrane protein 90890 92602 -1
CDS - ZP_05352713.1 CdifA_020200018271 type IV pilus assembly protein 92617 93825 -1
CDS - ZP_05352714.1 CdifA_020200018276 type IV pilus assembly protein 93837 95513 -1
CDS - ZP_05352715.1 CdifA_020200018281 pilin 95665 96177 -1
CDS - ZP_05352716.1 CdifA_020200018286 ribose-phosphate pyrophosphokinase 97262 98212 -1
CDS - ZP_05352717.1 CdifA_020200018291 bifunctional protein 98307 99686 -1