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Clostridium difficile CD196, complete genome. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS dnaA YP_003213055.1 CD196_0001 chromosomal replication initiator protein 1 1320 1
CDS dnaN YP_003213056.1 CD196_0002 DNA polymerase III, beta chain 1460 2668 1
CDS - YP_003213057.1 CD196_0003 putative RNA-binding mediating protein 2805 3011 1
CDS recF YP_003213058.1 CD196_0004 DNA replication and repair protein 3029 4144 1
CDS gyrB YP_003213059.1 CD196_0005 DNA gyrase subunit B 4145 6046 1
CDS gyrA YP_003213060.1 CD196_0006 DNA gyrase subunit A 6066 8492 1
CDS - YP_003213061.1 CD196_0007 hypothetical protein 8561 8857 1
CDS - YP_003213062.1 CD196_0008 hypothetical protein 8857 9117 1
CDS rsbV YP_003213063.1 CD196_0009 anti-sigma-B factor antagonist 9135 9446 1
CDS rsbW YP_003213064.1 CD196_0010 anti-sigma-B factor (serine-protein kinase) 9450 9857 1
CDS sigB YP_003213065.1 CD196_0011 RNA polymerase sigma-B factor 9857 10630 1
rRNA 16SrRNA - CD196_r28 16S ribosomal RNA 10716 12345 1
tRNA - - CD196_t001 tRNA-Ala 12370 12442 1
rRNA 23SrRNA - CD196_r21 23S ribosomal RNA 12696 15646 1
rRNA 5SrRNA - CD196_r22 5S ribosomal RNA 15708 15824 1
CDS - YP_003213066.1 CD196_0012 putative small-molecule-binding protein 15951 16460 1
CDS - YP_003213067.1 CD196_0013 putative mechanosensitive ion channel protein 16472 17353 1
CDS serS1 YP_003213068.1 CD196_0014 seryl-tRNA synthetase 17811 19082 1
CDS - YP_003213069.1 CD196_0015 putative cytosine/adenosine deaminase 19402 19857 1
tRNA - - CD196_t002 tRNA-Ser 19858 19946 1
CDS dnaH YP_003213070.1 CD196_0016 DNA polymerase III subunit gamma/tau 20328 21965 1
CDS - YP_003213071.1 CD196_0017 hypothetical protein 22024 22374 1
CDS recD YP_003213072.1 CD196_0018 recombination protein 22387 22986 1
CDS - YP_003213073.1 CD196_0019 putative glycosyl transferase 23419 24624 -1
rRNA 16SrRNA - CD196_r01 16S ribosomal RNA 25043 26821 1
rRNA 23SrRNA - CD196_r02 23S ribosomal RNA 26918 29868 1
rRNA 5SrRNA - CD196_r03 5S ribosomal RNA 29997 30113 1
tRNA - - CD196_t003 tRNA-Asn 30120 30191 1
tRNA - - CD196_t004 tRNA-Leu 30201 30286 1
tRNA - - CD196_t005 tRNA-Met 30302 30374 1
tRNA - - CD196_t006 tRNA-Glu 30385 30456 1
tRNA - - CD196_t007 tRNA-Gly 30469 30539 1
tRNA - - CD196_t008 tRNA-Val 30548 30620 1
tRNA - - CD196_t009 tRNA-Asp 30629 30702 1
tRNA - - CD196_t010 tRNA-Thr 30715 30786 1
tRNA - - CD196_t011 tRNA-Tyr 30804 30885 1
tRNA - - CD196_t012 tRNA-Leu 30897 30977 1
tRNA - - CD196_t013 tRNA-Arg 31010 31083 1
tRNA - - CD196_t014 tRNA-Gln 31094 31166 1
tRNA - - CD196_t015 tRNA-Ser 31258 31343 1
tRNA - - CD196_t016 tRNA-Phe 31350 31422 1
tRNA - - CD196_t017 tRNA-Met 31432 31505 1
tRNA - - CD196_t018 tRNA-Met 31520 31593 1
tRNA - - CD196_t019 tRNA-Pro 31620 31693 1
tRNA - - CD196_t020 tRNA-His 31704 31777 1
tRNA - - CD196_t021 tRNA-Lys 31789 31861 1
tRNA - - CD196_t022 tRNA-Cys 31872 31942 1
tRNA - - CD196_t023 tRNA-Asn 31952 32023 1
tRNA - - CD196_t024 tRNA-Leu 32032 32117 1
tRNA - - CD196_t025 tRNA-Met 32133 32205 1
tRNA - - CD196_t026 tRNA-Glu 32216 32287 1
tRNA - - CD196_t027 tRNA-Gly 32300 32370 1
tRNA - - CD196_t028 tRNA-Val 32379 32451 1
tRNA - - CD196_t029 tRNA-Asp 32460 32533 1
tRNA - - CD196_t030 tRNA-Thr 32546 32617 1
tRNA - - CD196_t031 tRNA-Tyr 32635 32716 1
tRNA - - CD196_t032 tRNA-Leu 32729 32809 1
tRNA - - CD196_t033 tRNA-Gly 32836 32907 1
tRNA - - CD196_t034 tRNA-Arg 32935 33008 1
tRNA - - CD196_t035 tRNA-Gln 33021 33093 1
tRNA - - CD196_t036 tRNA-Lys 33105 33177 1
tRNA - - CD196_t037 tRNA-Ser 33183 33268 1
tRNA - - CD196_t038 tRNA-Phe 33275 33347 1
tRNA - - CD196_t039 tRNA-Met 33357 33430 1
tRNA - - CD196_t040 tRNA-Met 33445 33518 1
tRNA - - CD196_t041 tRNA-His 33539 33612 1
tRNA - - CD196_t042 tRNA-Lys 33624 33696 1
tRNA - - CD196_t043 tRNA-Cys 33707 33777 1
tRNA - - CD196_t044 tRNA-Arg 33788 33861 1
tRNA - - CD196_t045 tRNA-Val 33877 33949 1
CDS - YP_003213074.1 CD196_0021 hypothetical protein 34028 34441 1
CDS pyc YP_003213075.1 CD196_0022 pyruvate carboxylase 34750 38181 1
CDS - YP_003213076.1 CD196_0023 putative translation elongation factor 38423 40351 1
CDS ctsR YP_003213077.1 CD196_0024 transcriptional regulator 40804 41268 1
CDS - YP_003213078.1 CD196_0025 putative DNA repair protein 41275 41769 1
CDS - YP_003213079.1 CD196_0026 putative ATP:guanido phosphotransferase 41785 42810 1
CDS clpC YP_003213080.1 CD196_0027 ATP-dependent Clp protease 42995 45244 1
CDS radA YP_003213081.1 CD196_0028 DNA repair protein 45424 46797 1
CDS - YP_003213082.1 CD196_0029 putative DNA-binding protein 46800 47870 1
CDS - YP_003213083.1 CD196_0030 hypothetical protein 47959 49053 1
CDS - YP_003213084.1 CD196_0031 hypothetical protein 49182 51359 1
CDS - YP_003213085.1 CD196_0032 AraC-family transcriptional regulator 51545 52390 -1
CDS - YP_003213086.1 CD196_0033 putative beta-glucosidase 52607 53773 1
CDS - YP_003213087.1 CD196_0034 putative beta-xylosidase 53795 55441 1
CDS - YP_003213088.1 CD196_0035 putative xylose transporter 55538 56911 1
CDS - YP_003213089.1 CD196_0036 transcriptional regulator 57356 58309 1
CDS acoA YP_003213090.1 CD196_0037 acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit 58341 59309 1
CDS acoB YP_003213091.1 CD196_0038 acetoin:2,6-dichlorophenolindophenol oxidoreductase beta subunit 59334 60320 1
CDS acoC YP_003213092.1 CD196_0039 E2 component of acetoin dehydrogenase enzyme system (dihydrolipoamide acetyltransferase) 60333 61379 1
CDS acoL YP_003213093.1 CD196_0040 E3 component of acetoin dehydrogenase enzyme system (dihydrolipoyl dehydrogenase) 61546 63276 1
CDS - YP_003213094.1 CD196_0041 putative transcription antiterminator 63694 66642 1
CDS - YP_003213095.1 CD196_0042 PTS system, IIa component 66620 67084 1
CDS - YP_003213096.1 CD196_0043 PTS system, IIb component 67197 67499 1
CDS - YP_003213097.1 CD196_0044 PTS system, IIc component 67561 68925 1
CDS - YP_003213098.1 CD196_0045 hypothetical protein 68960 69433 1
CDS - YP_003213099.1 CD196_0046 putative sugar-phosphate aldolase 69605 70255 1
CDS - YP_003213100.1 CD196_0047 putative lipoate-protein ligase 70429 71361 1
CDS ispD YP_003213101.1 CD196_0048 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 71602 72348 1
CDS ispF YP_003213102.1 CD196_0049 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 72345 72830 1
CDS proS YP_003213103.1 CD196_0050 prolyl-tRNA synthetase 73197 74912 1