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Clostridium difficile NAP07 contig00005, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06901478.1 HMPREF0219_0001 transcription antiterminator 1 1746 1
CDS fruA ZP_06901479.1 HMPREF0219_0002 PTS system, IIA component 1736 2185 1
CDS - ZP_06901480.1 HMPREF0219_0003 AraC family transcriptional regulator 2285 2440 1
CDS licT2 ZP_06901481.1 HMPREF0219_0004 transcription antiterminator LicT 2603 3445 1
CDS bglP3 ZP_06901482.1 HMPREF0219_0005 phosphotransferase system (PTS) enzyme I 3521 5518 1
CDS ascB ZP_06901483.1 HMPREF0219_0006 6-phospho-beta-glucosidase 5579 7006 1
CDS - ZP_06901484.1 HMPREF0219_0007 nitroreductase fused to ferredoxin domain protein 7419 8201 1
CDS - ZP_06901485.1 HMPREF0219_0008 ArsR family transcriptional regulator 8217 8582 1
CDS - ZP_06901486.1 HMPREF0219_0009 probable flavodoxin 8742 9491 -1
CDS - ZP_06901487.1 HMPREF0219_0010 transcriptional regulator 9915 10472 -1
CDS - ZP_06901488.1 HMPREF0219_0011 major facilitator family transporter 10723 12021 1
CDS - ZP_06901489.1 HMPREF0219_0012 NADH oxidase 11993 13942 1
CDS - ZP_06901490.1 HMPREF0219_0013 transcriptional regulator 14371 14805 1
CDS - ZP_06901491.1 HMPREF0219_0014 macrolide glycosyltransferase 14837 16024 1
CDS - ZP_06901492.1 HMPREF0219_0015 hypothetical protein 16216 16620 1
CDS - ZP_06901493.1 HMPREF0219_0016 LytTr family DNA-binding response regulator 17113 17823 1
CDS virS2 ZP_06901494.1 HMPREF0219_0017 sensor histidine kinase VirS 17817 19154 1
CDS - ZP_06901495.1 HMPREF0219_0018 hypothetical protein 19204 19326 1
CDS - ZP_06901496.1 HMPREF0219_0019 hypothetical protein 19331 21898 1
CDS cysA3 ZP_06901497.1 HMPREF0219_0020 sulfate/thiosulfate ABC superfamily ATP binding cassette transporter, ABC protein 21957 22640 1
CDS licT3 ZP_06901498.1 HMPREF0219_0021 transcription antiterminator LicT 22903 23763 1
CDS bglP4 ZP_06901499.1 HMPREF0219_0022 phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component 23753 25624 1
CDS bglA2 ZP_06901500.1 HMPREF0219_0023 6-phospho-beta-glucosidase 25644 27086 1
CDS - ZP_06901501.1 HMPREF0219_0024 oxygen-insensitive NAD(P)H nitroreductase 27365 27898 -1
CDS - ZP_06901502.1 HMPREF0219_0025 Rrf2 family transcriptional regulator 28036 28473 1
CDS - ZP_06901503.1 HMPREF0219_0026 ABC superfamily ATP binding cassette transporter permease subunit 29661 30869 1
CDS abgB2 ZP_06901504.1 HMPREF0219_0027 aminobenzoyl-glutamate utilization protein B 30900 32279 1
CDS - ZP_06901505.1 HMPREF0219_0028 hypothetical protein 32656 33984 -1
CDS - ZP_06901506.1 HMPREF0219_0029 6-phosphofructokinase 34594 35826 -1
CDS - ZP_06901507.1 HMPREF0219_0030 probable pentose-5-phosphate 3-epimerase 36216 36932 1
CDS - ZP_06901508.1 HMPREF0219_0031 hypothetical protein 37067 37693 1
CDS - ZP_06901509.1 HMPREF0219_0032 probable transcription antiterminator 37877 39421 -1
CDS - ZP_06901510.1 HMPREF0219_0033 possible transaldolase 39447 40088 -1
CDS gbsB ZP_06901511.1 HMPREF0219_0034 possible alcohol dehydrogenase 40359 41510 1
CDS - ZP_06901512.1 HMPREF0219_0035 IIB family HAD hydrolase 41550 42335 1
CDS crr ZP_06901513.1 HMPREF0219_0036 PTS family glucose/sucrose porter component IIA 42361 42852 1
CDS - ZP_06901514.1 HMPREF0219_0037 LytTr family DNA-binding response regulator 43348 44049 1
CDS - ZP_06901515.1 HMPREF0219_0038 sensor histidine kinase VirS 44430 45344 1
CDS - ZP_06901516.1 HMPREF0219_0039 hypothetical protein 45341 45466 1
CDS - ZP_06901517.1 HMPREF0219_0040 hypothetical protein 45438 45611 1
CDS - ZP_06901518.1 HMPREF0219_0041 coenzyme PQQ synthesis protein E 45684 46943 1
CDS - ZP_06901519.1 HMPREF0219_0042 radical SAM domain protein 46937 47953 1
CDS - ZP_06901520.1 HMPREF0219_0043 probable serine protease 47943 49034 1
CDS cysA4 ZP_06901521.1 HMPREF0219_0044 sulfate/thiosulfate ABC superfamily ATP binding cassette transporter, ABC protein 48994 49659 1
CDS - ZP_06901522.1 HMPREF0219_0045 ABC superfamily ATP binding cassette transporter ATP-binding and permease 49660 51435 1
CDS - ZP_06901523.1 HMPREF0219_0046 ABC superfamily ATP binding cassette transporter, permease protein 51605 54136 1
CDS - ZP_06901524.1 HMPREF0219_0047 M20 family peptidase 54853 56256 1
CDS - ZP_06901525.1 HMPREF0219_0048 PTS family porter 56228 57928 1
CDS - ZP_06901526.1 HMPREF0219_0049 MFS family major facilitator transporter 58524 59915 1
CDS amaA ZP_06901527.1 HMPREF0219_0050 N-acyl-L-amino acid amidohydrolase 59929 61116 1
CDS licT4 ZP_06901528.1 HMPREF0219_0051 transcription antiterminator LicT 61469 62329 1
CDS bglP5 ZP_06901529.1 HMPREF0219_0052 phosphotransferase system (PTS) enzyme I 62403 64319 1
CDS ascB2 ZP_06901530.1 HMPREF0219_0053 6-phospho-beta-glucosidase 64406 65830 1
CDS bglA3 ZP_06901531.1 HMPREF0219_0054 6-phospho-beta-glucosidase 65846 67279 1
CDS - ZP_06901532.1 HMPREF0219_0055 hypothetical protein 67566 67718 1
CDS - ZP_06901533.1 HMPREF0219_0056 sigma-54 dependent transcriptional regulator 67715 69724 1
CDS puuD ZP_06901534.1 HMPREF0219_0057 possible gamma-glutamyl-gamma-aminobutyrate hydrolase 69968 70720 1
CDS - ZP_06901535.1 HMPREF0219_0058 amino acid permease 70758 72077 1
CDS treA ZP_06901536.1 HMPREF0219_0059 alpha,alpha-phosphotrehalase 72172 73839 -1
CDS - ZP_06901537.1 HMPREF0219_0060 transcription regulator 74035 74757 -1
CDS nagE ZP_06901538.1 HMPREF0219_0061 PTS family porter component IIABC 75127 76575 1
CDS - ZP_06901539.1 HMPREF0219_0062 hypothetical protein 76568 77347 1
CDS bglH2 ZP_06901540.1 HMPREF0219_0063 beta-glucosidase 77830 78009 1
CDS - ZP_06901541.1 HMPREF0219_0064 RpiR family transcriptional regulator 78401 79153 1
CDS fruK ZP_06901542.1 HMPREF0219_0065 fructose-1-phosphate kinase 79219 80175 1
CDS - ZP_06901543.1 HMPREF0219_0066 PTS system, IIABC component 80178 82094 1
CDS kbaY2 ZP_06901544.1 HMPREF0219_0067 tagatose-bisphosphate aldolase 82114 82983 1
CDS - ZP_06901545.1 HMPREF0219_0068 oligo-1,6-glucosidase 83060 83233 1
CDS - ZP_06901546.1 HMPREF0219_0069 hypothetical protein 83504 84070 -1
CDS - ZP_06901547.1 HMPREF0219_0070 hypothetical protein 84236 84757 1
CDS gutA ZP_06901548.1 HMPREF0219_0071 hypothetical protein 84928 85095 1
CDS - ZP_06901549.1 HMPREF0219_0072 family 31 glycosyl hydrolase 85703 87781 1
CDS - ZP_06901550.1 HMPREF0219_0073 PTS family mannose/fructose/sorbose porter component IIC 87781 88560 1
CDS - ZP_06901551.1 HMPREF0219_0074 PTS family mannose/fructose/sorbose porter component IID 88553 89362 1
CDS - ZP_06901552.1 HMPREF0219_0075 PTS family mannose/fructose/sorbose porter component IIB 89370 89864 1
CDS - ZP_06901553.1 HMPREF0219_0076 PTS system, IIA component 89885 90289 1
CDS - ZP_06901554.1 HMPREF0219_0077 transcriptional regulator 90445 91605 -1
CDS xylB ZP_06901555.1 HMPREF0219_0078 xylulokinase 91813 93360 1
CDS xylA ZP_06901556.1 HMPREF0219_0079 xylose isomerase 93437 94801 1
CDS - ZP_06901557.1 HMPREF0219_0080 S41 family peptidase 95323 96522 1
CDS glvR ZP_06901558.1 HMPREF0219_0081 RpiR family transcriptional regulator 96687 97472 1
CDS glvC ZP_06901559.1 HMPREF0219_0082 PTS family porter, IIBC component 97620 99206 1
CDS malH ZP_06901560.1 HMPREF0219_0083 maltose-6'-phosphate glucosidase 99190 100551 1
CDS - ZP_06901561.1 HMPREF0219_0084 hypothetical protein 100565 101053 1
CDS ptbA ZP_06901562.1 HMPREF0219_0085 PTS system, IIA component 101067 101534 1
CDS - ZP_06901563.1 HMPREF0219_0086 major facilitator family transporter 101537 102691 1
CDS - ZP_06901564.1 HMPREF0219_0087 ABC superfamily ATP binding cassette transporter, ABC protein 103009 103761 1
CDS - ZP_06901565.1 HMPREF0219_0088 ABC superfamily ATP binding cassette transporter, permease protein 103762 105669 1
CDS - ZP_06901566.1 HMPREF0219_0089 response regulator 105806 106501 1
CDS - ZP_06901567.1 HMPREF0219_0090 two component system sensor histidine kinase 106495 107514 1
CDS anmK ZP_06901568.1 HMPREF0219_0091 anhydro-N-acetylmuramic acid kinase 107934 109094 1
CDS - ZP_06901569.1 HMPREF0219_0092 hypothetical protein 109096 109485 1
CDS celA ZP_06901570.1 HMPREF0219_0093 PTS family lactose-N,N'-diacetylchitobiose-beta-glucoside (lac) porter component IIB 109752 110060 1
CDS - ZP_06901571.1 HMPREF0219_0094 PTS family porter component IIC 110150 111496 1
CDS - ZP_06901572.1 HMPREF0219_0095 outer surface protein 111720 112826 1
CDS murQ ZP_06901573.1 HMPREF0219_0096 N-acetylmuramic acid 6-phosphate etherase 112925 113839 1
CDS - ZP_06901574.1 HMPREF0219_0097 BadF/BadG/BcrA/BcrD ATPase 113949 114789 1