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Clostridium difficile NAP07 contig00010, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06901682.1 HMPREF0219_0205 hypothetical protein 82 546 -1
CDS - ZP_06901683.1 HMPREF0219_0206 ferrichrome ABC superfamily ATP binding cassette transporter,substrate-binding protein 815 1753 1
CDS fhuB ZP_06901684.1 HMPREF0219_0207 ferrichrome ABC superfamily ATP binding cassette transporter, membrane protein 1882 2895 1
CDS fhuG ZP_06901685.1 HMPREF0219_0208 ferrichrome ABC superfamily ATP binding cassette transporter, membrane protein 2901 3923 1
CDS pstB3 ZP_06901686.1 HMPREF0219_0209 phosphate ABC superfamily ATP binding cassette transporter, ABC protein 3938 4720 1
CDS - ZP_06901687.1 HMPREF0219_0210 MATE efflux family protein 4732 6072 1
CDS - ZP_06901688.1 HMPREF0219_0211 probable signaling protein 6163 8445 -1
CDS - ZP_06901689.1 HMPREF0219_0212 UxaA family hydrolase 8775 9938 -1
CDS - ZP_06901690.1 HMPREF0219_0213 UxaA family hydrolase 9951 10226 -1
CDS - ZP_06901691.1 HMPREF0219_0214 2-keto-3-deoxygluconate permease 2 10247 11221 -1
CDS - ZP_06901692.1 HMPREF0219_0215 sigma-54 dependent transcriptional regulator 11491 13404 -1
CDS - ZP_06901693.1 HMPREF0219_0216 probable oxidoreductase 13580 14794 -1
CDS tldD ZP_06901694.1 HMPREF0219_0217 U62 family peptidase 2 TldD 15038 16420 1
CDS pmbA ZP_06901695.1 HMPREF0219_0218 peptide maturation protein PmbA 16432 17781 1
CDS cotJC2 ZP_06901696.1 HMPREF0219_0219 cotJC protein 17931 18464 1
CDS - ZP_06901697.1 HMPREF0219_0220 non-heme chloroperoxidase 18548 19357 1
CDS - ZP_06901698.1 HMPREF0219_0221 probable sigma-54-dependent transcriptional regulator 19768 21813 1
CDS - ZP_06901699.1 HMPREF0219_0222 membrane dipeptidase superfamily protein 22059 23273 1
CDS - ZP_06901700.1 HMPREF0219_0223 hypothetical protein 23325 24020 1
CDS - ZP_06901701.1 HMPREF0219_0224 hypothetical protein 24033 24710 1
CDS - ZP_06901702.1 HMPREF0219_0225 amidohydrolase 24878 26476 1
CDS - ZP_06901703.1 HMPREF0219_0226 CBS domain protein 26942 28231 1
CDS - ZP_06901704.1 HMPREF0219_0227 HAD-superfamily hydrolase 28260 28940 1
CDS - ZP_06901705.1 HMPREF0219_0228 hypothetical protein 28996 29580 1
CDS dhdh ZP_06901706.1 HMPREF0219_0229 possible trans-1,2-dihydrobenzene-1,2-diol dehydrogenase 29756 30775 1
CDS dltD ZP_06901707.1 HMPREF0219_0230 D-alanine transferase DltD 31065 32255 1
CDS - ZP_06901708.1 HMPREF0219_0231 hypothetical protein 32215 32361 1
CDS dltA ZP_06901709.1 HMPREF0219_0232 D-alanine--D-alanyl carrier protein ligase subunit 1 32376 33890 1
CDS dltB ZP_06901710.1 HMPREF0219_0233 D-alanine transfer protein DltB 33890 35038 1
CDS dltC ZP_06901711.1 HMPREF0219_0234 D-alanine--D-alanyl carrier protein ligase subunit 2 35057 35287 1
CDS - ZP_06901712.1 HMPREF0219_0235 DeoR family transcriptional regulator 35502 36287 1
CDS phnXW ZP_06901713.1 HMPREF0219_0236 2-aminoethylphosphonate--pyruvate transaminase 36562 38487 1
CDS - ZP_06901714.1 HMPREF0219_0237 hypothetical protein 38776 39597 1
CDS - ZP_06901715.1 HMPREF0219_0238 hypothetical protein 39638 40405 1
CDS - ZP_06901716.1 HMPREF0219_0239 hypothetical protein 40413 41033 1
CDS rbr ZP_06901717.1 HMPREF0219_0240 rubrerythrin 41335 41922 -1
CDS - ZP_06901718.1 HMPREF0219_0241 MarR family transcriptional regulator 42008 42445 -1
CDS adhA ZP_06901719.1 HMPREF0219_0242 alcohol dehydrogenase 42549 43547 1
CDS nit4 ZP_06901720.1 HMPREF0219_0243 Cyanoalanine nitrilase 43668 44594 -1
CDS - ZP_06901721.1 HMPREF0219_0244 amidohydrolase 44980 46581 1
CDS - ZP_06901722.1 HMPREF0219_0245 hypothetical protein 46900 47034 -1
CDS serS ZP_06901723.1 HMPREF0219_0246 serine--tRNA ligase 47368 48639 1
CDS - ZP_06901724.1 HMPREF0219_0247 probable two component sensor histidine kinase 48912 50417 1
CDS - ZP_06901725.1 HMPREF0219_0248 possible response regulator 50531 51229 1
CDS - ZP_06901726.1 HMPREF0219_0249 brp/Blh family beta-carotene 15,15'-monooxygenase 51513 52601 1
CDS hipO ZP_06901727.1 HMPREF0219_0250 M20D family peptidase 52832 54016 1
CDS mtrF2 ZP_06901728.1 HMPREF0219_0251 efflux pump component MtrF 54067 55617 1
CDS glyA ZP_06901729.1 HMPREF0219_0252 glycine hydroxymethyltransferase 55689 56945 1
CDS aca4 ZP_06901730.1 HMPREF0219_0253 possible calcium-transporting ATPase 57116 59890 1
CDS - ZP_06901731.1 HMPREF0219_0254 cation efflux family protein 60581 61759 1
CDS - ZP_06901732.1 HMPREF0219_0255 probable collagen-binding protein 62084 64987 1
CDS - ZP_06901733.1 HMPREF0219_0256 hypothetical protein 65357 66019 1
CDS - ZP_06901734.1 HMPREF0219_0257 permease of the drug/metabolite transporter 66141 67103 -1
CDS - ZP_06901735.1 HMPREF0219_0258 possible aspartate transaminase 67273 68463 -1
CDS - ZP_06901736.1 HMPREF0219_0259 MarR family transcriptional regulator 68769 69215 1
CDS - ZP_06901737.1 HMPREF0219_0260 FAD/FMN-binding superfamily oxidoreductase 69217 70311 1
CDS - ZP_06901738.1 HMPREF0219_0261 possible flavodoxin 70393 70923 1
CDS - ZP_06901739.1 HMPREF0219_0262 hypothetical protein 71250 72083 1
CDS - ZP_06901740.1 HMPREF0219_0263 hypothetical protein 72333 73376 -1
CDS - ZP_06901741.1 HMPREF0219_0264 serine racemase 73730 74842 -1
CDS - ZP_06901742.1 HMPREF0219_0265 dihydrofolate reductase family protein 75140 75721 1
CDS - ZP_06901743.1 HMPREF0219_0266 ABC superfamily ATP binding cassette transporter, ABC/membrane protein 75927 77693 1
CDS ndvA ZP_06901744.1 HMPREF0219_0267 ABC superfamily ATP binding cassette transporter, membrane protein 77693 79483 1
CDS - ZP_06901745.1 HMPREF0219_0268 hypothetical protein 79644 79952 -1
CDS - ZP_06901746.1 HMPREF0219_0269 hypothetical protein 80214 80762 -1
CDS - ZP_06901747.1 HMPREF0219_0270 GntR family transcriptional regulator 80864 81535 -1
CDS garR ZP_06901748.1 HMPREF0219_0271 2-hydroxy-3-oxopropionate reductase 81919 82824 1
CDS - ZP_06901749.1 HMPREF0219_0272 gluconate:H+ symporter family transporter 82960 84342 1
CDS - ZP_06901750.1 HMPREF0219_0273 hypothetical protein 84414 84844 1