xBASE Logo
About | Contact | Home

Clostridium difficile NAP07 contig00012, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS secA2 ZP_06901769.1 HMPREF0219_0292 preprotein translocase subunit SecA 132 2507 1
CDS - ZP_06901770.1 HMPREF0219_0293 cell surface protein (probable S-layer protein precursor) 2921 4792 1
CDS - ZP_06901771.1 HMPREF0219_0294 hypothetical protein 4899 5606 1
CDS - ZP_06901772.1 HMPREF0219_0295 cell surface protein 5639 7471 1
CDS gtcA ZP_06901773.1 HMPREF0219_0296 cell wall teichoic acid glycosylation protein GtcA 7518 7919 -1
CDS cwp84 ZP_06901774.1 HMPREF0219_0297 cell surface protein (probable cell surface-associated cysteine protease) 8147 10558 1
CDS - ZP_06901775.1 HMPREF0219_0298 cell surface protein 10861 12438 1
CDS - ZP_06901776.1 HMPREF0219_0299 hypothetical protein 12503 12961 -1
CDS - ZP_06901777.1 HMPREF0219_0300 brp/Blh family beta-carotene 15,15'-monooxygenase 12906 14018 1
CDS amiD2 ZP_06901778.1 HMPREF0219_0301 N-acetylmuramoyl-L-alanine amidase 14273 16297 1
CDS tuaA ZP_06901779.1 HMPREF0219_0302 sugar transferase domain protein 16505 17203 1
CDS - ZP_06901780.1 HMPREF0219_0303 cell surface protein 17298 18353 1
CDS mviN ZP_06901781.1 HMPREF0219_0304 integral membrane protein MviN 18469 20025 1
CDS pgcA ZP_06901782.1 HMPREF0219_0305 phosphoglucomutase 20071 21777 1
CDS manC ZP_06901783.1 HMPREF0219_0306 mannose-1-phosphate guanylyltransferase 21799 22872 1
CDS - ZP_06901784.1 HMPREF0219_0307 hypothetical teichoic acid biosynthesis protein 22884 23606 1
CDS - ZP_06901785.1 HMPREF0219_0308 probable polysaccharide polymerase 23622 24779 1
CDS - ZP_06901786.1 HMPREF0219_0309 glycosyl transferase 24800 25621 1
CDS - ZP_06901787.1 HMPREF0219_0310 probable minor teichoic acid biosynthesis protein 25621 26811 1
CDS tuaG ZP_06901788.1 HMPREF0219_0311 group 2 glycosyl transferase 26840 27589 1
CDS wbcL ZP_06901789.1 HMPREF0219_0312 possible glycosyltransferase 27611 28519 1
CDS - ZP_06901790.1 HMPREF0219_0313 group 2 glycosyl transferase 28567 29319 1
CDS ugd ZP_06901791.1 HMPREF0219_0314 UDP-glucose 6-dehydrogenase 29273 30640 1
CDS - ZP_06901792.1 HMPREF0219_0315 glycosyl transferase 30646 31737 1
CDS - ZP_06901793.1 HMPREF0219_0316 capsular polysaccharide biosynthesis protein 31793 33733 1
CDS - ZP_06901794.1 HMPREF0219_0317 probable cell-wall hydrolase 33921 34628 1
CDS yngK ZP_06901795.1 HMPREF0219_0318 FenI protein 34929 37040 1
CDS - ZP_06901796.1 HMPREF0219_0319 LytR family transcriptional regulator 37238 38203 -1
CDS - ZP_06901797.1 HMPREF0219_0320 LytR family transcriptional regulator 38488 39444 -1
CDS supH ZP_06901798.1 HMPREF0219_0321 possible sugar-phosphatase 39813 40601 1
CDS - ZP_06901799.1 HMPREF0219_0322 probable lipoprotein 40732 41202 -1
CDS - ZP_06901800.1 HMPREF0219_0323 possible Di-trans,poly-cis-decaprenylcistransferase 41341 41985 1
CDS amiD3 ZP_06901801.1 HMPREF0219_0324 N-acetylmuramoyl-L-alanine amidase 42028 42933 1
CDS - ZP_06901802.1 HMPREF0219_0325 probable signaling protein 43245 44792 1
CDS - ZP_06901803.1 HMPREF0219_0326 transcriptional regulator superfamily protein 44795 45193 1
CDS bstV ZP_06901804.1 HMPREF0219_0327 modification methylase bstVI 45233 46966 1
CDS - ZP_06901805.1 HMPREF0219_0328 patatin family phospholipase 47198 48409 1
CDS ptsH ZP_06901806.1 HMPREF0219_0329 PTS family porter, phosphocarrier protein HPR 48601 48861 1
CDS ptsI ZP_06901807.1 HMPREF0219_0330 PTS family porter, enzyme I 49214 50926 1
CDS - ZP_06901808.1 HMPREF0219_0331 hypothetical protein 51718 52383 -1
CDS - ZP_06901809.1 HMPREF0219_0332 hypothetical protein 52728 54158 1
CDS - ZP_06901810.1 HMPREF0219_0333 accessory protein regulator B 54526 55104 1
CDS - ZP_06901811.1 HMPREF0219_0334 autoinducer prepeptide 55134 55280 1
CDS aslB ZP_06901812.1 HMPREF0219_0335 radical SAM domain protein 55580 56959 1
CDS paaY ZP_06901813.1 HMPREF0219_0336 transferase hexapeptide repeat family protein 56988 57485 1
CDS - ZP_06901814.1 HMPREF0219_0337 ABC1 family protein 57783 59447 1
CDS recJ ZP_06901815.1 HMPREF0219_0338 single-stranded-DNA-specific exonuclease RecJ 59460 61910 1
CDS apt ZP_06901816.1 HMPREF0219_0339 adenine phosphoribosyltransferase 61923 62435 1
CDS relA ZP_06901817.1 HMPREF0219_0340 GTP diphosphokinase 62509 64716 1
CDS dtd ZP_06901818.1 HMPREF0219_0341 D-tyrosyl-tRNA(Tyr) deacylase 64741 65190 1
CDS - ZP_06901819.1 HMPREF0219_0342 metallo-beta-lactamase 65205 65819 1
CDS - ZP_06901820.1 HMPREF0219_0343 oxygen-independent coproporphyrinogen III oxidase 2 65910 67466 1
CDS hisS ZP_06901821.1 HMPREF0219_0344 histidine--tRNA ligase 67456 68718 1
CDS aspS ZP_06901822.1 HMPREF0219_0345 aspartate--tRNA ligase 68792 70579 1
CDS ncs2 ZP_06901823.1 HMPREF0219_0346 NCS2 family nucleotide:cation symporter-2 71037 72269 1
CDS - ZP_06901824.1 HMPREF0219_0347 carbon-nitrogen family hydrolase 72250 73089 1
CDS gltC ZP_06901825.1 HMPREF0219_0348 LysR family transcriptional regulator 73201 74070 -1
CDS - ZP_06901826.1 HMPREF0219_0349 cell surface protein 74364 75869 1
CDS - ZP_06901827.1 HMPREF0219_0350 hypothetical protein 75948 76217 -1
CDS nhaC2 ZP_06901828.1 HMPREF0219_0351 Na+/H+ antiporter NhaC 76220 77662 -1
CDS - ZP_06901829.1 HMPREF0219_0352 possible cystathionine beta-lyase 77687 78853 -1
CDS - ZP_06901830.1 HMPREF0219_0353 sigma-54 interaction domain protein 79078 80553 -1