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Clostridium difficile NAP07 contig00018, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS sigH ZP_06901900.1 HMPREF0219_0423 DNA-directed RNA polymerase sigma subunit SigH 59 721 -1
CDS - ZP_06901901.1 HMPREF0219_0424 tetracycline resistance protein 771 1298 -1
CDS rlmB ZP_06901902.1 HMPREF0219_0425 RNA methyltransferase 1301 2047 -1
CDS thyX ZP_06901903.1 HMPREF0219_0426 FAD-dependent thymidylate synthase 2051 2809 -1
CDS rnc3 ZP_06901904.1 HMPREF0219_0427 ribonuclease III 2915 3328 -1
CDS cysS ZP_06901905.1 HMPREF0219_0428 cysteine--tRNA ligase 3313 4716 -1
CDS - ZP_06901906.1 HMPREF0219_0429 hypothetical protein 4855 5010 -1
CDS gltX ZP_06901907.1 HMPREF0219_0430 glutamate--tRNA ligase 5231 6712 -1
CDS proS2 ZP_06901908.1 HMPREF0219_0431 proline--tRNA ligase 7156 8688 -1
CDS proS1 ZP_06901909.1 HMPREF0219_0432 proline--tRNA ligase 8723 10438 -1
CDS ispF ZP_06901910.1 HMPREF0219_0433 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 10804 11289 -1
CDS ispD ZP_06901911.1 HMPREF0219_0434 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 11286 12032 -1
CDS - ZP_06901912.1 HMPREF0219_0435 possible lipoate--protein ligase 12274 13206 -1
CDS ulaF ZP_06901913.1 HMPREF0219_0436 possible L-ribulose-5-phosphate 4-epimerase 13382 14032 -1
CDS - ZP_06901914.1 HMPREF0219_0437 hypothetical protein 14195 14668 -1
CDS - ZP_06901915.1 HMPREF0219_0438 PTS family galactitol (gat) porter component IIC 14703 16067 -1
CDS - ZP_06901916.1 HMPREF0219_0439 PTS family galactitol (gat) porter component IIB 16129 16431 -1
CDS - ZP_06901917.1 HMPREF0219_0440 PTS family fructose/mannitol porter component IIA 16510 16974 -1
CDS pspF8 ZP_06901918.1 HMPREF0219_0441 NtrC family transcriptional regulator 16952 19900 -1
CDS lpd2 ZP_06901919.1 HMPREF0219_0442 dihydrolipoyl dehydrogenase 20306 22036 -1
CDS - ZP_06901920.1 HMPREF0219_0443 E2 component of acetoin dehydrogenase enzyme system (dihydrolipoamide acetyltransferase) 22203 23249 -1
CDS bfmBAB ZP_06901921.1 HMPREF0219_0444 3-methyl-2-oxobutanoate dehydrogenase 23262 24248 -1
CDS pdhA ZP_06901922.1 HMPREF0219_0445 pyruvate dehydrogenase complex E1 component alpha subunit 24273 25235 -1
CDS - ZP_06901923.1 HMPREF0219_0446 transcriptional regulator 25273 26256 -1
CDS - ZP_06901924.1 HMPREF0219_0447 TPR repeats containing protein 26430 27881 -1
CDS - ZP_06901925.1 HMPREF0219_0448 response regulator 28049 28783 1
CDS - ZP_06901926.1 HMPREF0219_0449 two component sensor histidine kinase 28707 29885 1
CDS - ZP_06901927.1 HMPREF0219_0450 sugar transporter 30130 31503 -1
CDS xynB ZP_06901928.1 HMPREF0219_0451 possible xylan 1,4-beta-xylosidase 31601 33247 -1
CDS exg1 ZP_06901929.1 HMPREF0219_0452 possible glucan 1,3-beta-glucosidase 33269 34435 -1
CDS - ZP_06901930.1 HMPREF0219_0453 AraC family transcription regulator 34652 35503 1
CDS - ZP_06901931.1 HMPREF0219_0454 YjbE family integral membrane protein 35682 37859 -1
CDS pilT ZP_06901932.1 HMPREF0219_0455 PIN/TRAM domain protein 37988 39082 -1
CDS - ZP_06901933.1 HMPREF0219_0456 DNA integrity scanning protein 39171 40241 -1
CDS radA ZP_06901934.1 HMPREF0219_0457 DNA repair protein RadA 40244 41617 -1
CDS - ZP_06901935.1 HMPREF0219_0458 ATPase with chaperone activity, ATP-binding subunit 41797 44244 -1
CDS - ZP_06901936.1 HMPREF0219_0459 ATP:guanido phosphotransferase domain protein 44231 45256 -1
CDS mcsA ZP_06901937.1 HMPREF0219_0460 UvrB/uvrC domain protein 45272 45766 -1
CDS ctsR ZP_06901938.1 HMPREF0219_0461 transcriptional regulator CtsR 45773 46237 -1
CDS fusA2 ZP_06901939.1 HMPREF0219_0462 elongation factor G 46694 48634 -1
CDS pyc ZP_06901940.1 HMPREF0219_0463 pyruvate carboxylase 48864 52295 -1
CDS - ZP_06901941.1 HMPREF0219_0464 hypothetical protein 52608 53021 -1
tRNA - - HMPREF0219_t0001 tRNA-Val 53097 53172 -1
tRNA - - HMPREF0219_t0002 tRNA-Arg 53185 53261 -1
tRNA - - HMPREF0219_t0003 tRNA-Cys 53269 53342 -1
tRNA - - HMPREF0219_t0004 tRNA-Lys 53350 53425 -1
tRNA - - HMPREF0219_t0005 tRNA-His 53434 53510 -1
tRNA - - HMPREF0219_t0006 tRNA-Met 53528 53604 -1