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Clostridium difficile NAP07 contig00019, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06901942.1 HMPREF0219_0465 probable mannosyl-glycoprotein endo-beta-N-acetylglucosamidase 139 1113 -1
CDS mnaA ZP_06901943.1 HMPREF0219_0466 UDP-N-acetylglucosamine 2-epimerase 1221 2345 -1
CDS - ZP_06901944.1 HMPREF0219_0467 hypothetical protein 2402 3484 -1
CDS - ZP_06901945.1 HMPREF0219_0468 cellulose synthase subunit domain protein 3521 5602 -1
CDS - ZP_06901946.1 HMPREF0219_0469 group 2 glycosyl transferase 5625 6881 -1
CDS - ZP_06901947.1 HMPREF0219_0470 STE like transcription factor domain protein 6930 8594 -1
CDS - ZP_06901948.1 HMPREF0219_0471 GGDEF domain protein 8584 9432 -1
CDS potD ZP_06901949.1 HMPREF0219_0472 spermidine/putrescine ABC superfamily ATP binding cassette transporter, binding protein 9691 10743 -1
CDS potC ZP_06901950.1 HMPREF0219_0473 spermidine/putrescine ABC superfamily ATP binding cassette transporter, permease protein 10743 11471 -1
CDS potH ZP_06901951.1 HMPREF0219_0474 spermidine/putrescine ABC superfamily ATP binding cassette transporter, membrane protein 11522 12358 -1
CDS potA ZP_06901952.1 HMPREF0219_0475 spermidine/putrescine ABC superfamily ATP binding cassette transporter, ABC protein 12360 13403 -1
CDS - ZP_06901953.1 HMPREF0219_0476 cro/CI family transcriptional regulator 13422 13961 -1
CDS - ZP_06901954.1 HMPREF0219_0477 membrane protein 14397 15086 -1
CDS - ZP_06901955.1 HMPREF0219_0478 CotH protein 15468 17333 -1
CDS - ZP_06901956.1 HMPREF0219_0479 tubulin/FtsZ, GTPase 17350 18036 -1
CDS - ZP_06901957.1 HMPREF0219_0480 VTC domain protein 18123 18812 -1
CDS yfiC ZP_06901958.1 HMPREF0219_0481 multidrug resistance ABC superfamily ATP binding cassette transporter, membrane protein 19143 21005 -1
CDS - ZP_06901959.1 HMPREF0219_0482 ABC superfamily ATP binding cassette transporter, ABC/membrane protein 21043 22770 -1
CDS - ZP_06901960.1 HMPREF0219_0483 multidrug-efflux transporter 2 regulator 22843 23673 1
CDS - ZP_06901961.1 HMPREF0219_0484 hypothetical protein 23690 24667 1
CDS - ZP_06901962.1 HMPREF0219_0485 probable signaling protein 24882 26495 -1
CDS - ZP_06901963.1 HMPREF0219_0486 two component system sensor histidine kinase 26700 28187 -1
CDS - ZP_06901964.1 HMPREF0219_0487 response regulator 28189 28893 -1
CDS - ZP_06901965.1 HMPREF0219_0488 hypothetical protein 29386 29868 1
CDS nagB ZP_06901966.1 HMPREF0219_0489 glucosamine-6-phosphate deaminase 30000 30749 -1
CDS nagA ZP_06901967.1 HMPREF0219_0490 N-acetylglucosamine-6-phosphate deacetylase 30848 31990 -1
CDS - ZP_06901968.1 HMPREF0219_0491 transcriptional regulator 31991 32725 -1
CDS - ZP_06901969.1 HMPREF0219_0492 S1 RNA binding domain protein 33021 33863 1
CDS - ZP_06901970.1 HMPREF0219_0493 ABC superfamily ATP binding cassette transporter, permease protein 34044 36374 -1
CDS lolD2 ZP_06901971.1 HMPREF0219_0494 ABC superfamily ATP binding cassette transporter, ABC protein 36371 37066 -1
CDS - ZP_06901972.1 HMPREF0219_0495 sensor histidine kinase 37126 38367 -1
CDS - ZP_06901973.1 HMPREF0219_0496 response regulator 38378 39061 -1
CDS - ZP_06901974.1 HMPREF0219_0497 hypothetical protein 39582 39845 -1
CDS - ZP_06901975.1 HMPREF0219_0498 GNAT family acetyltransferase 39995 40399 -1
CDS mdh ZP_06901976.1 HMPREF0219_0499 malate dehydrogenase (oxaloacetate-decarboxylating) 40676 41857 -1
CDS fumB ZP_06901977.1 HMPREF0219_0500 fumarate hydratase 41923 42471 -1
CDS fumA ZP_06901978.1 HMPREF0219_0501 fumarate hydratase 42484 43323 -1
CDS ybaK ZP_06901979.1 HMPREF0219_0502 YbaK/ebsC protein 43520 43993 -1
CDS tauB2 ZP_06901980.1 HMPREF0219_0503 taurine ABC superfamily ATP binding cassette transporter, ABC protein 44116 44814 -1
CDS - ZP_06901981.1 HMPREF0219_0504 ABC superfamily ATP binding cassette transporter, permease protein 44802 45587 -1
CDS - ZP_06901982.1 HMPREF0219_0505 ABC superfamily ATP binding cassette transporter, substrate-binding lipoprotein 45559 46554 -1
CDS - ZP_06901983.1 HMPREF0219_0506 radical SAM domain protein 46660 48594 -1
CDS - ZP_06901984.1 HMPREF0219_0507 probable signaling protein 48779 52327 -1
CDS - ZP_06901985.1 HMPREF0219_0508 hypothetical protein 52597 52926 -1
CDS - ZP_06901986.1 HMPREF0219_0509 hypothetical protein 53142 54392 -1
CDS serA ZP_06901987.1 HMPREF0219_0510 phosphoglycerate dehydrogenase 54424 55365 -1
CDS - ZP_06901988.1 HMPREF0219_0511 possible serine--pyruvate transaminase 55605 56681 -1
CDS - ZP_06901989.1 HMPREF0219_0512 probable thioesterase 57054 57569 -1
CDS leuB ZP_06901990.1 HMPREF0219_0513 3-isopropylmalate dehydrogenase 57932 59002 -1
CDS leuD ZP_06901991.1 HMPREF0219_0514 3-isopropylmalate dehydratase small subunit 59009 59515 -1
CDS leuC ZP_06901992.1 HMPREF0219_0515 3-isopropylmalate dehydratase large subunit 59515 60792 -1
CDS leuA ZP_06901993.1 HMPREF0219_0516 2-isopropylmalate synthase 60749 62491 -1
CDS - ZP_06901994.1 HMPREF0219_0517 hypothetical protein 63009 63455 -1
CDS - ZP_06901995.1 HMPREF0219_0518 probable hydrolase 63476 64195 -1
CDS - ZP_06901996.1 HMPREF0219_0519 possible ribosomal protein S1 64313 65587 -1
CDS - ZP_06901997.1 HMPREF0219_0520 MATE efflux family protein 65787 67154 -1
CDS - ZP_06901998.1 HMPREF0219_0521 hypothetical protein 67404 67868 -1
CDS - ZP_06901999.1 HMPREF0219_0522 HAD-superfamily hydrolase 67873 68502 -1
CDS - ZP_06902000.1 HMPREF0219_0523 UbiA family prenyltransferase 68536 69423 -1
CDS - ZP_06902001.1 HMPREF0219_0524 hypothetical protein 69452 70690 -1
CDS - ZP_06902002.1 HMPREF0219_0525 aldo/keto reductase 71074 72216 -1
CDS - ZP_06902003.1 HMPREF0219_0526 cation efflux family protein 72357 73223 -1
CDS - ZP_06902004.1 HMPREF0219_0527 ABC superfamily ATP binding cassette transporter, membrane protein 73501 75048 -1
CDS opuAA ZP_06902005.1 HMPREF0219_0528 ABC superfamily ATP binding cassette transporter, ABC protein 75041 76177 -1
CDS dinB ZP_06902006.1 HMPREF0219_0529 DNA-directed DNA polymerase IV 76440 77540 -1
CDS - ZP_06902007.1 HMPREF0219_0530 ATP-dependent Zn protease 77933 79438 -1
CDS - ZP_06902008.1 HMPREF0219_0531 hypothetical protein 79699 80049 -1
CDS - ZP_06902009.1 HMPREF0219_0532 hypothetical protein 80271 80462 -1
CDS - ZP_06902010.1 HMPREF0219_0533 metallo-beta-lactamase superfamily exported protein 80580 81494 -1
CDS - ZP_06902011.1 HMPREF0219_0534 periplasmic hydrogenase 1 81628 83124 -1
CDS - ZP_06902012.1 HMPREF0219_0535 periplasmic hydrogenase 1 83404 84933 -1
CDS cspA2 ZP_06902013.1 HMPREF0219_0536 cold shock protein CspA 85361 85561 1
CDS speB ZP_06902014.1 HMPREF0219_0537 agmatinase 85741 86619 -1
CDS speE ZP_06902015.1 HMPREF0219_0538 spermidine synthase 86609 87460 -1
CDS speD ZP_06902016.1 HMPREF0219_0539 S-adenosylmethionine decarboxylase proenzyme 87490 87903 -1
CDS speA ZP_06902017.1 HMPREF0219_0540 arginine decarboxylase 87990 89501 -1
CDS - ZP_06902018.1 HMPREF0219_0541 GntR family transcriptional regulator 90118 90771 -1
CDS - ZP_06902019.1 HMPREF0219_0542 amylopullulanase 91002 92867 -1
CDS glgP ZP_06902020.1 HMPREF0219_0543 glycogen phosphorylase 92872 95313 -1
CDS glgA ZP_06902021.1 HMPREF0219_0544 starch synthase 95306 96748 -1
CDS glgD ZP_06902022.1 HMPREF0219_0545 glucose-1-phosphate adenylyltransferase 96777 97907 -1
CDS glgC ZP_06902023.1 HMPREF0219_0546 glucose-1-phosphate adenylyltransferase 97909 99069 -1
CDS - ZP_06902024.1 HMPREF0219_0547 SPFH domain/Band 7 family protein 99838 100881 -1
CDS - ZP_06902025.1 HMPREF0219_0548 nodulation efficiency protein D 100902 101348 -1
CDS - ZP_06902026.1 HMPREF0219_0549 carbohydrate kinase 101518 103098 -1