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Clostridium difficile NAP07 contig00023, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06902076.1 HMPREF0219_0599 metallo-beta-lactamase superfamily protein 1 114 -1
CDS - ZP_06902077.1 HMPREF0219_0600 glutamate synthase domain protein 411 1853 -1
CDS rbo ZP_06902078.1 HMPREF0219_0601 superoxide reductase 1980 2366 -1
CDS - ZP_06902079.1 HMPREF0219_0602 fur family transcriptional regulator 2403 2801 -1
CDS rbr2 ZP_06902080.1 HMPREF0219_0603 rubrerythrin 2824 3360 -1
CDS - ZP_06902081.1 HMPREF0219_0604 ABC superfamily ATP binding cassette transporter permease subunit 3738 4520 -1
CDS - ZP_06902082.1 HMPREF0219_0605 lantibiotic ABC superfamily ATP binding cassette transporter, permease protein 4530 5300 -1
CDS bcrA2 ZP_06902083.1 HMPREF0219_0606 bacitracin ABC ATP binding cassette transporter, ABC protein 5284 6207 -1
CDS - ZP_06902084.1 HMPREF0219_0607 two component sensor histidine kinase 6357 7292 -1
CDS - ZP_06902085.1 HMPREF0219_0608 response regulator 7289 8005 -1
CDS - ZP_06902086.1 HMPREF0219_0609 hypothetical protein 8113 8232 -1
CDS licT7 ZP_06902087.1 HMPREF0219_0610 transcription antiterminator LicT 8641 9489 -1
CDS yckE ZP_06902088.1 HMPREF0219_0611 beta-glucosidase 9517 10923 -1
CDS bglP6 ZP_06902089.1 HMPREF0219_0612 phosphotransferase system enzyme I 11254 13131 -1
CDS - ZP_06902090.1 HMPREF0219_0613 major facilitator family transporter 13455 14654 1
CDS - ZP_06902091.1 HMPREF0219_0614 GntR family transcriptional regulator 14680 15375 1
CDS - ZP_06902092.1 HMPREF0219_0615 probable PTS system, IIB component 15547 15849 -1
CDS - ZP_06902093.1 HMPREF0219_0616 probable universal stress protein 15871 16281 -1
CDS - ZP_06902094.1 HMPREF0219_0617 probable signaling protein 16480 18408 -1
CDS - ZP_06902095.1 HMPREF0219_0618 flavodoxin 18471 19004 -1
CDS - ZP_06902096.1 HMPREF0219_0619 hypothetical protein 19095 20105 -1
CDS - ZP_06902097.1 HMPREF0219_0620 hypothetical protein 20593 20937 1
CDS pspF6 ZP_06902098.1 HMPREF0219_0621 NtrC family transcriptional regulator 21268 22644 -1
CDS etfA2 ZP_06902099.1 HMPREF0219_0622 electron transfer flavoprotein alpha subunit 22743 23765 -1
CDS etfB2 ZP_06902100.1 HMPREF0219_0623 electron transfer flavoprotein beta subunit 23776 24570 -1
CDS bcd3 ZP_06902101.1 HMPREF0219_0624 butyryl-CoA dehydrogenase 24581 25723 -1
CDS hadA2 ZP_06902102.1 HMPREF0219_0625 3-methyl-2-oxobutanoate dehydrogenase 25763 26995 -1
CDS - ZP_06902103.1 HMPREF0219_0626 UIT2 family protein 27132 28472 -1
CDS crt ZP_06902104.1 HMPREF0219_0627 3-hydroxybutyryl-CoA dehydratase 28566 29360 -1
CDS - ZP_06902105.1 HMPREF0219_0628 glucose-1-phosphate adenylyltransferase 30104 30823 -1
CDS nadE ZP_06902106.1 HMPREF0219_0629 NAD(+) synthase 30906 31661 -1
CDS - ZP_06902107.1 HMPREF0219_0630 permease 31839 32225 1
CDS - ZP_06902108.1 HMPREF0219_0631 permease 32225 32602 1
CDS - ZP_06902109.1 HMPREF0219_0632 xaa-Pro dipeptidase 32688 33356 -1
CDS mutT2 ZP_06902110.1 HMPREF0219_0633 NTP pyrophosphohydrolase including oxidative damage repair enzyme 33641 34084 -1
CDS - ZP_06902111.1 HMPREF0219_0634 hypothetical protein 34171 34848 -1
CDS hflX2 ZP_06902112.1 HMPREF0219_0635 GTP-binding protein HflX 34856 36139 -1
CDS - ZP_06902113.1 HMPREF0219_0636 hypothetical protein 36356 36616 1
CDS - ZP_06902114.1 HMPREF0219_0637 integral membrane protein 36722 37357 -1
CDS - ZP_06902115.1 HMPREF0219_0638 ABC superfamily ATP binding cassette transporter, ABC protein 37385 38965 -1
CDS amiD4 ZP_06902116.1 HMPREF0219_0639 N-acetylmuramoyl-L-alanine amidase 39137 40021 -1
CDS - ZP_06902117.1 HMPREF0219_0640 probable stage IV sporulation protein 40249 41256 1
CDS yunB ZP_06902118.1 HMPREF0219_0641 sporulation protein YunB 41468 42166 -1
CDS - ZP_06902119.1 HMPREF0219_0642 penicillin-binding protein 42339 45074 1
CDS - ZP_06902120.1 HMPREF0219_0643 hypothetical protein 45700 46635 -1
CDS - ZP_06902121.1 HMPREF0219_0644 amidohydrolase 46679 47851 -1
CDS - ZP_06902122.1 HMPREF0219_0645 hypothetical protein 47838 48302 -1
CDS - ZP_06902123.1 HMPREF0219_0646 hypothetical protein 48317 49159 -1
CDS - ZP_06902124.1 HMPREF0219_0647 ribose operon repressor 49533 50549 -1
CDS spoVAE ZP_06902125.1 HMPREF0219_0648 stage V sporulation protein AE 50733 51095 -1
CDS spoVAD ZP_06902126.1 HMPREF0219_0649 stage V sporulation protein AD 51108 52121 -1
CDS spoVAC ZP_06902127.1 HMPREF0219_0650 stage V sporulation protein AC 52275 52712 -1
CDS sigF ZP_06902128.1 HMPREF0219_0651 RNA polymerase sigma-F factor 52999 53763 -1
CDS spoIIAB ZP_06902129.1 HMPREF0219_0652 non-specific serine/threonine protein kinase 53786 54214 -1
CDS spoIIAA ZP_06902130.1 HMPREF0219_0653 anti-sigma F factor antagonist 54228 54563 -1
CDS - ZP_06902131.1 HMPREF0219_0654 probable formate dehydrogenase 54650 56758 -1
CDS srlD ZP_06902132.1 HMPREF0219_0655 sorbitol-6-phosphate 2-dehydrogenase 57106 57885 -1
CDS srlB ZP_06902133.1 HMPREF0219_0656 PTS system, glucitol/sorbitol-specific IIA component 57979 58344 -1
CDS srlE' ZP_06902134.1 HMPREF0219_0657 PTS family porter, enzyme I 58385 58951 -1
CDS srlE2 ZP_06902135.1 HMPREF0219_0658 PTS system, glucitol/sorbitol-specific IIB component 58976 59344 -1
CDS gutA2 ZP_06902136.1 HMPREF0219_0659 PTS system, glucitol/sorbitol-specific IIC component 59408 59968 -1
CDS - ZP_06902137.1 HMPREF0219_0660 glucitol operon activator protein 59997 60431 -1
CDS - ZP_06902138.1 HMPREF0219_0661 probable transcription antiterminator 60436 62421 -1
CDS deaD ZP_06902139.1 HMPREF0219_0662 cold-shock DEAD box protein A 62828 64441 -1
CDS - ZP_06902140.1 HMPREF0219_0663 K+-dependent Na+/Ca+ exchanger-like protein 64532 65593 -1
CDS pflB ZP_06902141.1 HMPREF0219_0664 formate C-acetyltransferase 65886 68117 1
CDS pflA ZP_06902142.1 HMPREF0219_0665 pyruvate formate-lyase activating enzyme 68277 69011 1
CDS - ZP_06902143.1 HMPREF0219_0666 nitroreductase 69410 70051 -1
CDS - ZP_06902144.1 HMPREF0219_0667 fimbrial protein (pilin) 70294 71112 -1
CDS thiI ZP_06902145.1 HMPREF0219_0668 thiamine biosynthesis/tRNA modification protein ThiI 71233 72408 -1
CDS iscS ZP_06902146.1 HMPREF0219_0669 cysteine desulfurase 72454 73605 -1
CDS - ZP_06902147.1 HMPREF0219_0670 ABC superfamily ATP binding cassette transporter, ABC protein 74252 74974 -1
CDS glnP ZP_06902148.1 HMPREF0219_0671 glutamine ABC superfamily ATP binding cassette transporter, membrane protein 75033 75725 -1
CDS artI ZP_06902149.1 HMPREF0219_0672 amino acid ABC superfamily ATP binding cassette transporter, substrate-binding protein 75738 76553 -1
CDS pcrA2 ZP_06902150.1 HMPREF0219_0673 ATP-dependent helicase 77515 79581 -1
CDS - ZP_06902151.1 HMPREF0219_0674 GGDEF domain/EAL domain protein 79658 82687 -1
CDS - ZP_06902152.1 HMPREF0219_0675 probable lipoprotein 82740 84200 -1
CDS - ZP_06902153.1 HMPREF0219_0676 hypothetical protein 84292 84660 -1
CDS motB ZP_06902154.1 HMPREF0219_0677 chemotaxis protein MotB 84838 85584 -1
CDS motA ZP_06902155.1 HMPREF0219_0678 chemotaxis MotA protein 85599 86387 -1
tRNA - - HMPREF0219_t0007 tRNA-Ser 86475 86565 -1
CDS - ZP_06902156.1 HMPREF0219_0679 DeoR family transcriptional regulator 86824 87588 1
CDS eutH ZP_06902157.1 HMPREF0219_0680 ethanolamine utilization protein EutH 87869 88984 -1
CDS glpK2 ZP_06902158.1 HMPREF0219_0681 glycerol kinase 89025 90551 -1
CDS - ZP_06902159.1 HMPREF0219_0682 class V superfamily aminotransferase 90844 91941 1
CDS - ZP_06902160.1 HMPREF0219_0683 hypothetical protein 92246 92758 -1
CDS - ZP_06902161.1 HMPREF0219_0684 hypothetical protein 93310 94185 1
CDS hisK ZP_06902162.1 HMPREF0219_0685 histidinol-phosphatase 94501 95280 -1
CDS - ZP_06902163.1 HMPREF0219_0686 hypothetical protein 95549 95899 -1
CDS - ZP_06902164.1 HMPREF0219_0687 hypothetical protein 95915 96331 -1
CDS - ZP_06902165.1 HMPREF0219_0688 hypothetical protein 96350 96541 -1
CDS - ZP_06902166.1 HMPREF0219_0689 biotin/lipoate A/B protein ligase 96692 97507 -1
CDS - ZP_06902167.1 HMPREF0219_0690 radical SAM domain protein 97554 98492 -1
CDS - ZP_06902168.1 HMPREF0219_0691 radical SAM domain protein 98489 99361 -1
CDS - ZP_06902169.1 HMPREF0219_0692 iron-sulfur cluster binding protein 99386 101314 -1
CDS gcvH ZP_06902170.1 HMPREF0219_0693 glycine cleavage system H protein 101426 101803 -1
CDS acsB ZP_06902171.1 HMPREF0219_0694 CO dehydrogenase/acetyl-CoA synthase complex 101890 104016 -1
CDS - ZP_06902172.1 HMPREF0219_0695 probable carbon monoxide dehydrogenase/acetyl-CoA synthase complex, methyltransferase subunit 104073 104879 -1
CDS acsC ZP_06902173.1 HMPREF0219_0696 corrinoid/iron-sulfur protein 104929 106296 -1
CDS acsD ZP_06902174.1 HMPREF0219_0697 corrinoid/iron-sulfur protein 106327 107271 -1