xBASE Logo
About | Contact | Home

Clostridium difficile NAP07 contig00033, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS aspC ZP_06902424.1 HMPREF0219_0947 aspartate transaminase 1 384 1
CDS - ZP_06902425.1 HMPREF0219_0948 membrane spanning protein 407 931 1
CDS - ZP_06902426.1 HMPREF0219_0949 hypothetical protein 1031 1849 1
CDS - ZP_06902427.1 HMPREF0219_0950 hypothetical protein 1927 2238 1
CDS - ZP_06902428.1 HMPREF0219_0951 hypothetical protein 2415 3098 -1
CDS - ZP_06902429.1 HMPREF0219_0952 TetR family transcriptional regulator 3191 3841 -1
CDS gbeA ZP_06902430.1 HMPREF0219_0953 1,4-alpha-glucan branching enzyme 4006 6009 -1
CDS recX ZP_06902431.1 HMPREF0219_0954 recombination regulator RecX 6162 6800 -1
CDS nadD ZP_06902432.1 HMPREF0219_0955 nicotinate-nucleotide adenylyltransferase 7076 7765 1
CDS - ZP_06902433.1 HMPREF0219_0956 HD domain protein 7766 8338 1
CDS - ZP_06902434.1 HMPREF0219_0957 iojap-like protein 8455 8805 1
CDS leuS ZP_06902435.1 HMPREF0219_0958 leucyl-tRNA synthetase 9159 11579 1
CDS - ZP_06902436.1 HMPREF0219_0959 hypothetical protein 11920 12981 1
CDS - ZP_06902437.1 HMPREF0219_0960 hypothetical protein 13710 14270 -1
CDS - ZP_06902438.1 HMPREF0219_0961 hypothetical protein 14708 15379 1
CDS - ZP_06902439.1 HMPREF0219_0962 hypothetical protein 15574 15768 1
CDS - ZP_06902440.1 HMPREF0219_0963 possible asparaginase 16547 17542 -1
CDS - ZP_06902441.1 HMPREF0219_0964 aspartate aminotransferase 17663 19291 -1
CDS ilvA ZP_06902442.1 HMPREF0219_0965 threonine ammonia-lyase 19935 21176 1
CDS - ZP_06902443.1 HMPREF0219_0966 endoribonuclease inhibitor of translation 21271 21651 1
CDS scrA2 ZP_06902444.1 HMPREF0219_0967 PTS system, IIA component 21937 22419 1
CDS licT6 ZP_06902445.1 HMPREF0219_0968 BglG family transcriptional antiterminator 22440 23255 1
CDS glvC2 ZP_06902446.1 HMPREF0219_0969 PTS family porter, IIBC component 23308 24858 1
CDS aglB ZP_06902447.1 HMPREF0219_0970 maltose-6'-phosphate glucosidase 24905 26257 1
CDS - ZP_06902448.1 HMPREF0219_0971 AraC family transcription regulator 26358 26939 1
CDS - ZP_06902449.1 HMPREF0219_0972 hypothetical protein 26982 27146 1
CDS - ZP_06902450.1 HMPREF0219_0973 hypothetical protein 27193 27912 1
CDS lmrB ZP_06902451.1 HMPREF0219_0974 lincomycin resistance protein LmrB 28036 29436 -1
CDS - ZP_06902452.1 HMPREF0219_0975 TetR family transcriptional regulator 29440 30348 -1
CDS - ZP_06902453.1 HMPREF0219_0976 probable D-alanyl-D-alanine carboxypeptidase 30610 31257 1
CDS atp2A1 ZP_06902454.1 HMPREF0219_0977 P-ATPase superfamily cation transporter 31582 34221 1
CDS hisC ZP_06902455.1 HMPREF0219_0978 histidinol-phosphate transaminase 34279 35382 -1
CDS - ZP_06902456.1 HMPREF0219_0979 IIB family HAD hydrolase 35743 36564 1
CDS argH ZP_06902457.1 HMPREF0219_0980 argininosuccinate lyase 36932 38257 1
CDS - ZP_06902458.1 HMPREF0219_0981 hypothetical protein 38489 38842 1
CDS - ZP_06902459.1 HMPREF0219_0982 possible serine-type D-Ala-D-Ala carboxypeptidase 38967 40256 -1
CDS - ZP_06902460.1 HMPREF0219_0983 probable competence protein 40336 41040 1
CDS selD ZP_06902461.1 HMPREF0219_0984 selenide, water dikinase 41228 42178 1
CDS selA ZP_06902462.1 HMPREF0219_0985 L-seryl-tRNA(Sec) selenium transferase 42196 43608 1
CDS selB ZP_06902463.1 HMPREF0219_0986 selenocysteine-specific translation elongation factor 43722 45605 1
CDS - ZP_06902464.1 HMPREF0219_0987 probable sensor histidine kinase 45710 48448 1
CDS pmi ZP_06902465.1 HMPREF0219_0988 mannose-6-phosphate isomerase 48567 49511 -1
CDS - ZP_06902466.1 HMPREF0219_0989 probable peptidase 49684 51045 1
CDS - ZP_06902467.1 HMPREF0219_0990 transcriptional antiterminator 51133 53022 1
CDS - ZP_06902468.1 HMPREF0219_0991 PTS family fructose/mannitol (fru) porter component IIA 53037 53492 1
CDS fryB ZP_06902469.1 HMPREF0219_0992 PTS family porter, enzyme I 53550 53867 1
CDS - ZP_06902470.1 HMPREF0219_0993 PTS system, IIC component 53892 55154 1
CDS pepQ ZP_06902471.1 HMPREF0219_0994 Xaa-Pro dipeptidase 55259 56323 1
CDS patB2 ZP_06902472.1 HMPREF0219_0995 PLP-dependent aminotransferase 56377 57555 1
CDS - ZP_06902473.1 HMPREF0219_0996 XRE family transcriptional regulator 57712 57948 1
CDS - ZP_06902474.1 HMPREF0219_0997 TerC family integral membrane protein 57952 58386 1
CDS apbE ZP_06902475.1 HMPREF0219_0998 thiamine biosynthesis lipoprotein ApbE 58562 59617 -1
CDS - ZP_06902476.1 HMPREF0219_0999 possible secreted protein 59684 60055 1
CDS ung ZP_06902477.1 HMPREF0219_1000 uracil-DNA glycosylase 60092 60766 1
CDS - ZP_06902478.1 HMPREF0219_1001 3D domain protein 61014 61853 1
CDS - ZP_06902479.1 HMPREF0219_1002 HesA/MoeB/ThiF family protein 62342 63049 1
CDS - ZP_06902480.1 HMPREF0219_1003 metallo-beta-lactamase 63191 64027 -1
CDS - ZP_06902481.1 HMPREF0219_1004 hypothetical protein 64214 65119 1
CDS - ZP_06902482.1 HMPREF0219_1005 GNAT family acetyltransferase 65128 66312 1
CDS - ZP_06902483.1 HMPREF0219_1006 probable competence membrane protein 66427 67728 1
CDS holA ZP_06902484.1 HMPREF0219_1007 DNA-directed DNA polymerase III delta subunit 67682 68725 1
CDS rpsT ZP_06902485.1 HMPREF0219_1008 30S ribosomal protein S20 68915 69217 -1
CDS - ZP_06902486.1 HMPREF0219_1009 hypothetical protein 69503 70132 1
CDS gpr ZP_06902487.1 HMPREF0219_1010 GPR endopeptidase 70474 71427 1
CDS spoIIP ZP_06902488.1 HMPREF0219_1011 stage II sporulation protein P 71445 72464 1
CDS - ZP_06902489.1 HMPREF0219_1012 hypothetical protein 72495 72746 1
CDS lepA ZP_06902490.1 HMPREF0219_1013 GTP-binding protein LepA 73028 74833 1
CDS - ZP_06902491.1 HMPREF0219_1014 polyA polymerase 74982 76319 1
CDS - ZP_06902492.1 HMPREF0219_1015 amino acid permease 76552 77865 1
CDS hemN ZP_06902493.1 HMPREF0219_1016 possible coproporphyrinogen dehydrogenase 78037 79212 1
CDS hrcA ZP_06902494.1 HMPREF0219_1017 heat-inducible transcription repressor HrcA 79315 80334 1
CDS grpE ZP_06902495.1 HMPREF0219_1018 co-chaperone GrpE 80364 80984 1
CDS dnaK ZP_06902496.1 HMPREF0219_1019 chaperone DnaK 81076 82923 1
CDS dnaJ ZP_06902497.1 HMPREF0219_1020 chaperone DnaJ 83134 84288 1
CDS - ZP_06902498.1 HMPREF0219_1021 hypothetical protein 84491 84616 1
CDS glcK ZP_06902499.1 HMPREF0219_1022 glucokinase 85263 86198 1
CDS ywoD ZP_06902500.1 HMPREF0219_1023 major facilitator superfamily transporter protein YwoD 86231 87604 1
CDS - ZP_06902501.1 HMPREF0219_1024 hypothetical protein 87792 88559 -1
CDS - ZP_06902502.1 HMPREF0219_1025 ABC superfamily ATP binding cassette transporter, ABC protein 88589 89698 -1