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Clostridium difficile NAP07 contig00039, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS ggt ZP_06902802.1 HMPREF0219_1325 possible gamma-glutamyltransferase 214 1827 1
CDS sseA ZP_06902803.1 HMPREF0219_1326 possible 3-mercaptopyruvate sulfurtransferase 1955 2806 -1
CDS hydG ZP_06902804.1 HMPREF0219_1327 oxidoreductase 3417 4325 1
CDS aspB ZP_06902805.1 HMPREF0219_1328 possible glutamate synthase (NADPH) 4325 5719 1
CDS - ZP_06902806.1 HMPREF0219_1329 probable signaling protein 6084 8303 1
CDS - ZP_06902807.1 HMPREF0219_1330 ABC superfamily ATP binding cassette transporter, ABC protein 8387 9202 1
CDS - ZP_06902808.1 HMPREF0219_1331 ABC superfamily ATP binding cassette transporter, permease protein 9202 11082 1
CDS - ZP_06902809.1 HMPREF0219_1332 MATE efflux family protein 11201 12592 1
CDS - ZP_06902810.1 HMPREF0219_1333 hypothetical protein 12699 13739 1
CDS - ZP_06902811.1 HMPREF0219_1334 FMN-dependent NADH-azoreductase 1 14231 14884 1
CDS - ZP_06902812.1 HMPREF0219_1335 hypothetical protein 14960 15169 1
CDS - ZP_06902813.1 HMPREF0219_1336 hypothetical protein 15309 15875 -1
CDS - ZP_06902814.1 HMPREF0219_1337 hemolysin III family channel protein 16035 16688 1
CDS - ZP_06902815.1 HMPREF0219_1338 hypothetical protein 16846 17022 -1
CDS - ZP_06902816.1 HMPREF0219_1339 probable ATP phosphoribosyltransferase regulatory subunit 17549 18493 1
CDS hisG ZP_06902817.1 HMPREF0219_1340 ATP phosphoribosyltransferase 18515 19141 1
CDS hisC3 ZP_06902818.1 HMPREF0219_1341 histidinol-phosphate transaminase 19175 20224 1
CDS hisB ZP_06902819.1 HMPREF0219_1342 histidine biosynthesis bifunctional protein HisB (histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase) 20227 20805 1
CDS hisH ZP_06902820.1 HMPREF0219_1343 imidazole glycerol phosphate synthase subunit HisH 20807 21412 1
CDS hisA ZP_06902821.1 HMPREF0219_1344 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 21409 22131 1
CDS hisF ZP_06902822.1 HMPREF0219_1345 imidazoleglycerol-phosphate synthase HisF 22113 22871 1
CDS hisI ZP_06902823.1 HMPREF0219_1346 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase 22899 23567 1
CDS - ZP_06902824.1 HMPREF0219_1347 amino acid permease 24359 25702 1
CDS - ZP_06902825.1 HMPREF0219_1348 probable polysaccharide deacetylase 26463 27296 1
CDS - ZP_06902826.1 HMPREF0219_1349 probable peptidyl-prolyl isomerase 27365 28321 1
CDS - ZP_06902827.1 HMPREF0219_1350 RNA polymerase sigma factor SigV 28373 28855 1
CDS - ZP_06902828.1 HMPREF0219_1351 anti-SigV factor 28867 29736 1
CDS - ZP_06902829.1 HMPREF0219_1352 hypothetical protein 29910 30041 1
CDS - ZP_06902830.1 HMPREF0219_1353 hypothetical protein 30306 30527 1
CDS - ZP_06902831.1 HMPREF0219_1354 probable dehydrogenase accessory protein 30569 31390 1
CDS - ZP_06902832.1 HMPREF0219_1355 hypothetical protein 31395 32156 1
CDS - ZP_06902833.1 HMPREF0219_1356 hypothetical protein 32686 32925 1
CDS ilvC ZP_06902834.1 HMPREF0219_1357 ketol-acid reductoisomerase 33204 34199 1
CDS ilvB ZP_06902835.1 HMPREF0219_1358 acetolactate synthase large subunit 34252 35940 1
CDS ydbD ZP_06902836.1 HMPREF0219_1359 catalase 36148 36825 1
CDS tmk2 ZP_06902837.1 HMPREF0219_1360 thymidylate kinase 36995 39031 1
CDS - ZP_06902838.1 HMPREF0219_1361 MarR/EmrR family transcriptional regulator 39349 39657 -1
CDS - ZP_06902839.1 HMPREF0219_1362 alpha/beta hydrolase 40067 41002 1
CDS - ZP_06902840.1 HMPREF0219_1363 ABC superfamily ATP binding cassette transporter, ABC protein 41351 42133 1
CDS - ZP_06902841.1 HMPREF0219_1364 ABC superfamily ATP binding cassette transporter 42114 44243 1
CDS - ZP_06902842.1 HMPREF0219_1365 probable transcriptional regulator 44460 45671 1
CDS - ZP_06902843.1 HMPREF0219_1366 hypothetical protein 45723 45845 1
CDS - ZP_06902844.1 HMPREF0219_1367 GNAT family acetyltransferase 45982 46503 -1
CDS - ZP_06902845.1 HMPREF0219_1368 3D/G5 domain protein 46865 47662 1
CDS - ZP_06902846.1 HMPREF0219_1369 probable arylesterase 47772 48362 1
CDS pgcA2 ZP_06902847.1 HMPREF0219_1370 phosphoglucomutase 48427 50124 1
CDS - ZP_06902848.1 HMPREF0219_1371 probable membrane-associated ribonuclease 50325 51164 1
CDS - ZP_06902849.1 HMPREF0219_1372 probable two component histidine kinase 51683 53539 1
CDS hom2 ZP_06902850.1 HMPREF0219_1373 homoserine dehydrogenase 54248 55465 1
CDS - ZP_06902851.1 HMPREF0219_1374 hypothetical protein 55581 56075 1
CDS hisD ZP_06902852.1 HMPREF0219_1375 histidinol dehydrogenase 56314 57579 1
CDS - ZP_06902853.1 HMPREF0219_1376 alpha/beta hydrolase 57784 58536 -1
CDS - ZP_06902854.1 HMPREF0219_1377 hypothetical protein 58735 58923 -1
CDS - ZP_06902855.1 HMPREF0219_1378 probable sugar metabolism repressor 59398 59754 1
CDS - ZP_06902856.1 HMPREF0219_1379 probable sugar metabolism repressor 60020 60223 1
CDS - ZP_06902857.1 HMPREF0219_1380 probable N-acetylglucosamine kinase 60223 60378 1
CDS - ZP_06902858.1 HMPREF0219_1381 membrane protein 60778 61410 1
CDS kdpA ZP_06902859.1 HMPREF0219_1382 potassium-transporting ATPase subunit A 61960 63636 1
CDS kdpB ZP_06902860.1 HMPREF0219_1383 potassium-transporting ATPase subunit B 63661 65718 1
CDS kdpC ZP_06902861.1 HMPREF0219_1384 potassium-transporting ATPase subunit C 65722 66363 1
CDS srpG ZP_06902862.1 HMPREF0219_1385 cysteine synthase 66600 67508 1
CDS cysE ZP_06902863.1 HMPREF0219_1386 serine acetyltransferase 67526 68125 1
CDS fer ZP_06902864.1 HMPREF0219_1387 ferredoxin 68286 68474 1
CDS map ZP_06902865.1 HMPREF0219_1388 methionyl aminopeptidase 68528 69397 -1
CDS - ZP_06902866.1 HMPREF0219_1389 hypothetical protein 69594 70844 -1
CDS - ZP_06902867.1 HMPREF0219_1390 endo/exonuclease amino terminal GIY-YIG domain protein 71131 71433 1
CDS thiD ZP_06902868.1 HMPREF0219_1391 probable phosphomethylpyrimidine kinase 71727 72521 1
CDS thiM ZP_06902869.1 HMPREF0219_1392 hydroxyethylthiazole kinase 72545 73330 1
CDS thiE ZP_06902870.1 HMPREF0219_1393 thiamine-phosphate diphosphorylase 73353 73985 1
CDS licB5 ZP_06902871.1 HMPREF0219_1394 PTS family lichenan porter component IIB 74124 74426 1
CDS - ZP_06902872.1 HMPREF0219_1395 ABC superfamily ATP binding cassette transporter, permease protein 74492 75247 -1
CDS - ZP_06902873.1 HMPREF0219_1396 ABC superfamily ATP binding cassette transporter, ABC protein 75235 76197 -1
CDS - ZP_06902874.1 HMPREF0219_1397 hypothetical protein 76201 76653 -1
CDS - ZP_06902875.1 HMPREF0219_1398 GntR family transcriptional regulator 77014 77370 1
CDS - ZP_06902876.1 HMPREF0219_1399 ABC superfamily ATP binding cassette transporter, ABC protein 77424 78158 1
CDS - ZP_06902877.1 HMPREF0219_1400 ABC superfamily ATP binding cassette transporter, permease protein 78151 78975 1
CDS - ZP_06902878.1 HMPREF0219_1401 hypothetical protein 78986 80185 1
CDS - ZP_06902879.1 HMPREF0219_1402 hypothetical protein 80194 81006 1
CDS - ZP_06902880.1 HMPREF0219_1403 hypothetical protein 81017 82285 1
CDS - ZP_06902881.1 HMPREF0219_1404 aryldialkylphosphatase 82642 83823 1
CDS - ZP_06902882.1 HMPREF0219_1405 hypothetical protein 83965 84882 -1
CDS - ZP_06902883.1 HMPREF0219_1406 ABC superfamily ATP binding cassette transporter, ABC protein 85135 85929 1
CDS - ZP_06902884.1 HMPREF0219_1407 sodium extrusion ABC superfamily ATP binding cassette transporter, permease protein 85930 87990 1
CDS - ZP_06902885.1 HMPREF0219_1408 probable signaling protein 88729 90141 1
CDS - ZP_06902886.1 HMPREF0219_1409 GntR family transcriptional regulator 90317 90685 1
CDS - ZP_06902887.1 HMPREF0219_1410 ABC superfamily ATP binding cassette transporter, ABC protein 90687 91412 1
CDS - ZP_06902888.1 HMPREF0219_1411 ABC superfamily ATP binding cassette transporter permease subunit 91406 92170 1
CDS - ZP_06902889.1 HMPREF0219_1412 major facilitator family transporter 92416 93666 1
CDS - ZP_06902890.1 HMPREF0219_1413 mechanosensitive ion channel family protein 93858 94742 1
CDS - ZP_06902891.1 HMPREF0219_1414 hypothetical protein 95101 95718 1
CDS - ZP_06902892.1 HMPREF0219_1415 metallo-beta-lactamase 95824 98355 1
CDS - ZP_06902893.1 HMPREF0219_1416 hypothetical protein 98566 99186 1
CDS - ZP_06902894.1 HMPREF0219_1417 probable membrane-associated metal-dependent hydrolase 99353 99922 -1
CDS sodA2 ZP_06902895.1 HMPREF0219_1418 superoxide dismutase 100002 100706 -1
CDS asnB ZP_06902896.1 HMPREF0219_1419 asparagine synthase (glutamine-hydrolyzing) 100879 102762 1
CDS - ZP_06902897.1 HMPREF0219_1420 probable serine protease 102853 104289 -1
CDS terD ZP_06902898.1 HMPREF0219_1421 tellurium resistance protein TerD 104618 105196 1
CDS terD2 ZP_06902899.1 HMPREF0219_1422 tellurium resistance protein TerD 105235 105813 1
CDS terD3 ZP_06902900.1 HMPREF0219_1423 tellurium resistance protein TerD 105899 106528 1
CDS aca8 ZP_06902901.1 HMPREF0219_1424 possible calcium-transporting ATPase 106518 109277 1