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Clostridium difficile NAP07 contig00045, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06903359.1 HMPREF0219_1882 diaminopropionate ammonia-lyase 1 309 -1
CDS - ZP_06903360.1 HMPREF0219_1883 NADPH-dependent FMN reductase 672 1343 -1
CDS xdhA3 ZP_06903361.1 HMPREF0219_1884 possible xanthine dehydrogenase 1423 3639 -1
CDS cutS ZP_06903362.1 HMPREF0219_1885 carbon-monoxide dehydrogenase (acceptor) 3642 4112 -1
CDS - ZP_06903363.1 HMPREF0219_1886 possible S-adenosylhomocysteine deaminase 4174 5568 -1
CDS - ZP_06903364.1 HMPREF0219_1887 xanthine/uracil permease 5641 7002 -1
CDS - ZP_06903365.1 HMPREF0219_1888 xanthine/uracil permease 7299 8648 -1
CDS pspF7 ZP_06903366.1 HMPREF0219_1889 sigma-54 dependent transcriptional regulator 8977 10017 -1
CDS - ZP_06903367.1 HMPREF0219_1890 hypothetical protein 10335 11603 -1
CDS - ZP_06903368.1 HMPREF0219_1891 McrB domain protein 11596 13530 -1
CDS - ZP_06903369.1 HMPREF0219_1892 hypothetical protein 13559 14281 -1
CDS - ZP_06903370.1 HMPREF0219_1893 DeoR family transcriptional regulator 14331 15335 -1
CDS - ZP_06903371.1 HMPREF0219_1894 hypothetical protein 15370 15870 -1
CDS - ZP_06903372.1 HMPREF0219_1895 hypothetical protein 16156 16464 -1
CDS xdhA4 ZP_06903373.1 HMPREF0219_1896 possible xanthine dehydrogenase 16604 18868 -1
CDS cutS2 ZP_06903374.1 HMPREF0219_1897 possible carbon-monoxide dehydrogenase (acceptor) 18872 19321 -1
CDS - ZP_06903375.1 HMPREF0219_1898 probable FAD-binding subunit of oxidoreductase 19321 20109 -1
CDS - ZP_06903376.1 HMPREF0219_1899 probable Na(+)/H(+) antiporter 20303 21589 -1
CDS - ZP_06903377.1 HMPREF0219_1900 DNA polymerase III 21913 22089 -1
CDS - ZP_06903378.1 HMPREF0219_1901 ABC superfamily ATP binding cassette transporter, permease protein 22223 23305 -1
CDS - ZP_06903379.1 HMPREF0219_1902 ABC superfamily ATP binding cassette transporter, permease protein 23408 25003 -1
CDS - ZP_06903380.1 HMPREF0219_1903 ABC superfamily ATP binding cassette transporter, ABC protein 25050 25757 -1
CDS - ZP_06903381.1 HMPREF0219_1904 DEAD/DEAH box family ATP-dependent RNA helicase 26009 27154 1
CDS yieG ZP_06903382.1 HMPREF0219_1905 NCS2 family nucleobase:cation symporter-2 27256 28632 -1
CDS - ZP_06903383.1 HMPREF0219_1906 MATE efflux family protein 29078 30424 1
CDS - ZP_06903384.1 HMPREF0219_1907 sodium:sulfate symporter transmembrane protein superfamily protein 30485 31897 1
CDS tal2 ZP_06903385.1 HMPREF0219_1908 transaldolase 32019 32693 -1
CDS gutR ZP_06903386.1 HMPREF0219_1909 DeoR family transcriptional regulator 32966 33730 1
CDS - ZP_06903387.1 HMPREF0219_1910 hypothetical protein 34018 34290 -1
CDS - ZP_06903388.1 HMPREF0219_1911 two component sensor histidine kinase 34642 35919 -1
CDS - ZP_06903389.1 HMPREF0219_1912 response regulator 35903 36571 -1
CDS actP ZP_06903390.1 HMPREF0219_1913 copper-exporting ATPase 36731 39232 -1
CDS - ZP_06903391.1 HMPREF0219_1914 hypothetical protein 39523 39714 -1
CDS - ZP_06903392.1 HMPREF0219_1915 hypothetical protein 39862 40104 -1
CDS typA ZP_06903393.1 HMPREF0219_1916 GTP-binding protein TypA/BipA 40316 42139 1
CDS trxB4 ZP_06903394.1 HMPREF0219_1917 thioredoxin-disulfide reductase 42229 43137 -1
CDS - ZP_06903395.1 HMPREF0219_1918 possible threonine synthase 44261 45742 1
CDS thrB ZP_06903396.1 HMPREF0219_1919 homoserine kinase 45743 46645 1
CDS - ZP_06903397.1 HMPREF0219_1920 2-nitropropane dioxygenase family oxidoreductase 46832 47830 1
CDS - ZP_06903398.1 HMPREF0219_1921 hypothetical protein 47984 48496 -1
CDS - ZP_06903399.1 HMPREF0219_1922 CorA family magnesium transporter 49018 49953 1
CDS - ZP_06903400.1 HMPREF0219_1923 probable multiprotein-complex assembly protein 50045 51916 -1
CDS - ZP_06903401.1 HMPREF0219_1924 probable transporter 52109 53035 1
CDS - ZP_06903402.1 HMPREF0219_1925 hypothetical protein 53147 53320 1
CDS - ZP_06903403.1 HMPREF0219_1926 GNAT family acetyltransferase 53425 53970 -1
CDS - ZP_06903404.1 HMPREF0219_1927 hypothetical protein 54002 54226 -1
CDS - ZP_06903405.1 HMPREF0219_1928 hypothetical protein 54423 55547 1
CDS - ZP_06903406.1 HMPREF0219_1929 hypothetical protein 56021 56845 -1
CDS ispG ZP_06903407.1 HMPREF0219_1930 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 57193 58248 -1
CDS rseP ZP_06903408.1 HMPREF0219_1931 RIP metalloprotease RseP 58431 59435 -1
CDS dxr ZP_06903409.1 HMPREF0219_1932 1-deoxy-D-xylulose-5-phosphate reductoisomerase 59448 60602 -1
CDS - ZP_06903410.1 HMPREF0219_1933 hypothetical protein 60766 60999 -1
CDS cas2-2 ZP_06903411.1 HMPREF0219_1934 CRISPR-associated protein cas2 61659 61949 -1
CDS cas1-2 ZP_06903412.1 HMPREF0219_1935 CRISPR-associated protein cas1 62160 63158 -1
CDS cas4-2 ZP_06903413.1 HMPREF0219_1936 CRISPR-associated protein cas4 63193 63687 -1
CDS - ZP_06903414.1 HMPREF0219_1937 hypothetical protein 64395 64523 1
CDS - ZP_06903415.1 HMPREF0219_1938 hypothetical protein 66560 69118 -1
CDS cas5-2 ZP_06903416.1 HMPREF0219_1939 CRISPR-associated protein cas5 69142 69882 -1
CDS - ZP_06903417.1 HMPREF0219_1940 hypothetical protein 69884 70879 -1
CDS csh ZP_06903418.1 HMPREF0219_1941 csh1 family CRISPR-associated protein 70866 72626 -1
CDS cas6-2 ZP_06903419.1 HMPREF0219_1942 CRISPR-associated protein cas6 72617 73312 -1
CDS - ZP_06903420.1 HMPREF0219_1943 hypothetical protein 73856 74062 1
CDS - ZP_06903421.1 HMPREF0219_1944 hypothetical protein 74498 75079 1
CDS - ZP_06903422.1 HMPREF0219_1945 probable signaling protein 75164 76984 -1
CDS - ZP_06903423.1 HMPREF0219_1946 sensory box/GGDEF/EAL domain protein 77370 77513 -1
CDS - ZP_06903424.1 HMPREF0219_1947 hypothetical protein 77894 78067 -1
CDS cdsA ZP_06903425.1 HMPREF0219_1948 possible phosphatidate cytidylyltransferase 78042 78821 -1
CDS uppS ZP_06903426.1 HMPREF0219_1949 Di-trans,poly-cis-decaprenylcistransferase 78834 79568 -1
CDS - ZP_06903427.1 HMPREF0219_1950 hypothetical protein 79597 79800 -1
CDS frr ZP_06903428.1 HMPREF0219_1951 ribosome recycling factor 79803 80360 -1
CDS pyrH ZP_06903429.1 HMPREF0219_1952 UMP kinase 80386 81090 -1
CDS tsf ZP_06903430.1 HMPREF0219_1953 elongation factor EF1B 81174 82085 -1
CDS rpsB ZP_06903431.1 HMPREF0219_1954 30S ribosomal protein S2 82164 82877 -1
CDS - ZP_06903432.1 HMPREF0219_1955 possible serine-type D-Ala-D-Ala carboxypeptidase 83084 84277 -1
CDS - ZP_06903433.1 HMPREF0219_1956 ion channel superfamily protein 84372 85430 -1
CDS - ZP_06903434.1 HMPREF0219_1957 probable transcriptional regulator 85635 86279 -1
CDS - ZP_06903435.1 HMPREF0219_1958 probable sporulation protein YtaF 86467 87090 1
CDS mutS2 ZP_06903436.1 HMPREF0219_1959 DNA mismatch repair protein MutS2 87153 89063 -1
CDS rtcB ZP_06903437.1 HMPREF0219_1960 release factor H-coupled RctB family protein 89577 90644 -1
CDS - ZP_06903438.1 HMPREF0219_1961 probable serine/threonine protein kinase 90890 91885 -1
CDS - ZP_06903439.1 HMPREF0219_1962 hypothetical protein 91946 92065 1
CDS - ZP_06903440.1 HMPREF0219_1963 VanW like protein 92054 93313 -1
CDS - ZP_06903441.1 HMPREF0219_1964 endonuclease/exonuclease/phosphatase 93553 94182 -1
CDS - ZP_06903442.1 HMPREF0219_1965 hypothetical protein 94375 94536 -1
CDS - ZP_06903443.1 HMPREF0219_1966 hypothetical protein 94876 96036 -1
CDS yhfE ZP_06903444.1 HMPREF0219_1967 M42 family peptidase 96506 97546 1
CDS - ZP_06903445.1 HMPREF0219_1968 hypothetical protein 97927 98178 1
CDS - ZP_06903446.1 HMPREF0219_1969 GTP-binding protein 98193 99401 1
CDS - ZP_06903447.1 HMPREF0219_1970 biotin synthase 99437 100522 1
CDS thiH2 ZP_06903448.1 HMPREF0219_1971 thiamine biosynthesis protein ThiH 100523 101899 1
CDS - ZP_06903449.1 HMPREF0219_1972 hypothetical protein 101990 102424 1
CDS gabT ZP_06903450.1 HMPREF0219_1973 possible (S)-3-amino-2-methylpropionate transaminase 102498 103823 -1
CDS - ZP_06903451.1 HMPREF0219_1974 membrane protein 104109 104894 -1
CDS - ZP_06903452.1 HMPREF0219_1975 VanZ like family protein 105009 105968 -1
CDS - ZP_06903453.1 HMPREF0219_1976 hypothetical protein 106126 106443 -1
CDS - ZP_06903454.1 HMPREF0219_1977 GNAT family acetyltransferase 106545 107045 -1
CDS - ZP_06903455.1 HMPREF0219_1978 DHHA1 domain protein 107097 108296 -1
CDS ldh ZP_06903456.1 HMPREF0219_1979 L-lactate dehydrogenase 108870 109838 1
CDS - ZP_06903457.1 HMPREF0219_1980 hypothetical protein 109955 111085 -1
CDS msrAB ZP_06903458.1 HMPREF0219_1981 peptide-methionine (R)-S-oxide reductase 111238 112197 -1