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Clostridium difficile NAP07 contig00216, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06903713.1 HMPREF0219_2236 hypothetical protein 1 569 -1
CDS - ZP_06903714.1 HMPREF0219_2237 hypothetical protein 864 1142 -1
CDS - ZP_06903715.1 HMPREF0219_2238 4Fe-4S ferredoxin iron-sulfur binding domain protein 1447 2208 -1
CDS - ZP_06903716.1 HMPREF0219_2239 collagen triple helix repeat protein 2377 4413 -1
CDS - ZP_06903717.1 HMPREF0219_2240 glycosyl transferase 4492 5568 -1
CDS clpP2 ZP_06903718.1 HMPREF0219_2241 ATP-dependent Clp protease proteolytic subunit 5871 6455 -1
CDS - ZP_06903719.1 HMPREF0219_2242 AraC family transcription regulator 6452 6934 -1
CDS - ZP_06903720.1 HMPREF0219_2243 GntR family transcriptional regulator 7133 8548 -1
CDS - ZP_06903721.1 HMPREF0219_2244 hypothetical protein 8663 9331 1
CDS - ZP_06903722.1 HMPREF0219_2245 oxygen-insensitive NAD(P)H nitroreductase 9522 10040 -1
CDS - ZP_06903723.1 HMPREF0219_2246 transcriptional regulator 10192 10515 1
CDS - ZP_06903724.1 HMPREF0219_2247 DJ-1/PfpI family protein 10520 10846 -1
CDS - ZP_06903725.1 HMPREF0219_2248 ABC superfamily ATP binding cassette transporter, ABC protein 12128 13666 1
CDS - ZP_06903726.1 HMPREF0219_2249 response regulator 13943 14773 -1
CDS - ZP_06903727.1 HMPREF0219_2250 MOP/MATE family multidrug-resistance efflux pump 15106 16506 -1
CDS - ZP_06903728.1 HMPREF0219_2251 ABC superfamily ATP binding cassette transporter, permease protein 16768 17562 -1
CDS - ZP_06903729.1 HMPREF0219_2252 ABC superfamily ATP binding cassette transporter, permease protein 17559 18422 -1
CDS - ZP_06903730.1 HMPREF0219_2253 ABC superfamily ATP binding cassette transporter, ABC protein 18400 19410 -1
CDS - ZP_06903731.1 HMPREF0219_2254 probable signaling protein 20098 21054 1
CDS - ZP_06903732.1 HMPREF0219_2255 hypothetical protein 21633 22331 -1
CDS rsgA ZP_06903733.1 HMPREF0219_2256 ribosome small subunit-dependent GTPase A 22874 23941 -1
CDS - ZP_06903734.1 HMPREF0219_2257 hypothetical protein 23938 24354 -1
CDS - ZP_06903735.1 HMPREF0219_2258 hypothetical protein 25282 25458 1
CDS - ZP_06903736.1 HMPREF0219_2259 hypothetical protein 25868 26005 1
CDS - ZP_06903737.1 HMPREF0219_2260 hypothetical protein 26009 26506 1
CDS rumA2 ZP_06903738.1 HMPREF0219_2261 23S rRNA (uracil-5-)-methyltransferase 26983 28341 -1
CDS pyk ZP_06903739.1 HMPREF0219_2262 pyruvate kinase 28516 30276 -1
CDS pfkA ZP_06903740.1 HMPREF0219_2263 6-phosphofructokinase 30328 31287 -1
CDS dnaE ZP_06903741.1 HMPREF0219_2264 DNA-directed DNA polymerase III alpha subunit 31496 35065 -1
CDS - ZP_06903742.1 HMPREF0219_2265 protein of hypothetical function DUF199 35210 36163 -1
CDS - ZP_06903743.1 HMPREF0219_2266 NUDIX hydrolase 36180 36605 -1
CDS - ZP_06903744.1 HMPREF0219_2267 protein of hypothetical function UPF0052 and CofD 36674 37792 -1
CDS - ZP_06903745.1 HMPREF0219_2268 ATP-binding protein 37792 38649 -1
CDS - ZP_06903746.1 HMPREF0219_2269 probable phosphoesterase 38680 39393 -1
CDS murB ZP_06903747.1 HMPREF0219_2270 UDP-N-acetylmuramate dehydrogenase 39397 40350 -1
CDS - ZP_06903748.1 HMPREF0219_2271 formate/nitrite transporter 40583 41353 -1
CDS - ZP_06903749.1 HMPREF0219_2272 probable cardiolipin synthetase 41672 43153 1
CDS hydC ZP_06903750.1 HMPREF0219_2273 Fe-hydrogenase 43470 43967 1
CDS hymB ZP_06903751.1 HMPREF0219_2274 NADH dehydrogenase (quinone) 43984 45870 1
CDS hydA ZP_06903752.1 HMPREF0219_2275 periplasmic hydrogenase 45893 47674 1
CDS hexA ZP_06903753.1 HMPREF0219_2276 DNA mismatch repair protein HexA 47814 49610 -1
CDS hprK ZP_06903754.1 HMPREF0219_2277 HPr kinase/phosphorylase 49824 50753 -1
CDS uvrC ZP_06903755.1 HMPREF0219_2278 excision endonuclease subunit UvrC 50753 52570 -1
CDS uvrA3 ZP_06903756.1 HMPREF0219_2279 excision endonuclease subunit UvrA 52833 55658 -1
CDS uvrB ZP_06903757.1 HMPREF0219_2280 excision endonuclease subunit UvrB 55677 57683 -1
CDS - ZP_06903758.1 HMPREF0219_2281 probable nucleotide pyrophosphatase 57833 59095 -1
CDS - ZP_06903759.1 HMPREF0219_2282 ABC superfamily ATP binding cassette transporter, solute-binding protein 59158 60468 -1
CDS ugpE ZP_06903760.1 HMPREF0219_2283 sugar ABC superfamily ATP binding cassette transporter, membrane protein 60493 61440 -1
CDS - ZP_06903761.1 HMPREF0219_2284 ABC superfamily ATP binding cassette transporter, membrane protein 61397 62266 -1
CDS ugpC ZP_06903762.1 HMPREF0219_2285 ABC superfamily ATP binding cassette transporter, ABC protein 62250 63320 -1