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Clostridium difficile NAP07 contig00228, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06904134.1 HMPREF0219_2657 hypothetical protein 212 364 -1
CDS feoB3 ZP_06904135.1 HMPREF0219_2658 FeoB family ferrous iron (Fe2+) uptake protein 390 2561 -1
CDS feoA ZP_06904136.1 HMPREF0219_2659 ferrous iron transport protein A 2649 2870 -1
CDS - ZP_06904137.1 HMPREF0219_2660 FeoA domain protein 2883 3095 -1
CDS - ZP_06904138.1 HMPREF0219_2661 probable signaling protein 3416 6313 -1
CDS - ZP_06904139.1 HMPREF0219_2662 dienelactone hydrolase 6639 7247 -1
CDS - ZP_06904140.1 HMPREF0219_2663 rubredoxin/rubrerythrin 7507 8052 -1
CDS - ZP_06904141.1 HMPREF0219_2664 multidrug resistance ABC superfamily ATP binding cassette transporter, membrane protein 8170 9993 -1
CDS - ZP_06904142.1 HMPREF0219_2665 multidrug resistance ABC superfamily ATP binding cassette transporter, ABC/membrane protein 10006 11781 -1
CDS - ZP_06904143.1 HMPREF0219_2666 YhgE/Pip domain protein 12074 14302 1
CDS - ZP_06904144.1 HMPREF0219_2667 rhodanese domain protein 14538 14837 -1
CDS pbp ZP_06904145.1 HMPREF0219_2668 penicillin-binding protein 15045 18086 1
CDS - ZP_06904146.1 HMPREF0219_2669 probable iron-sulfur protein 18248 19522 -1
CDS - ZP_06904147.1 HMPREF0219_2670 ABC superfamily ATP binding cassette transporter, permease protein 19742 22303 -1
CDS - ZP_06904148.1 HMPREF0219_2671 ABC superfamily ATP binding cassette transporter, ABC protein 22304 22981 -1
CDS resE3 ZP_06904149.1 HMPREF0219_2672 sensor histidine kinase ResE 23061 24314 -1
CDS - ZP_06904150.1 HMPREF0219_2673 response regulator 24292 25017 -1
CDS - ZP_06904151.1 HMPREF0219_2674 hypothetical protein 25263 25709 -1
CDS - ZP_06904152.1 HMPREF0219_2675 GntR family transcriptional regulator 25901 26290 1
CDS - ZP_06904153.1 HMPREF0219_2676 hypothetical protein 26283 27374 1
CDS - ZP_06904154.1 HMPREF0219_2677 HD family hydrolase 27491 27967 1
CDS nimB ZP_06904155.1 HMPREF0219_2678 5-nitroimidazole antibiotic resistance protein NimB 28353 28820 1
CDS - ZP_06904156.1 HMPREF0219_2679 probable flavoprotein 28880 29452 -1
CDS - ZP_06904157.1 HMPREF0219_2680 protein of hypothetical function DUF34 29514 30611 -1
CDS - ZP_06904158.1 HMPREF0219_2681 possible S-adenosyl-L-methionine-dependent methyltransferase 30625 31332 -1
CDS rpoD2 ZP_06904159.1 HMPREF0219_2682 DNA-directed RNA polymerase sigma subunit RpoD 31476 32642 -1
CDS - ZP_06904160.1 HMPREF0219_2683 DNA primase 32660 34486 -1
CDS aroF2 ZP_06904161.1 HMPREF0219_2684 phospho-2-dehydro-3-deoxyheptonate aldolase 34705 35490 -1
CDS folK ZP_06904162.1 HMPREF0219_2685 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase 35471 35977 -1
CDS folB ZP_06904163.1 HMPREF0219_2686 dihydroneopterin aldolase 35970 36365 -1
CDS folP ZP_06904164.1 HMPREF0219_2687 dihydropteroate synthase 36346 37137 -1
CDS folE ZP_06904165.1 HMPREF0219_2688 GTP cyclohydrolase I 37203 37775 -1
CDS - ZP_06904166.1 HMPREF0219_2689 hypothetical protein 37801 38502 -1
CDS ilvE ZP_06904167.1 HMPREF0219_2690 possible branched-chain-amino-acid transaminase 38536 39279 -1
CDS pabB ZP_06904168.1 HMPREF0219_2691 aminodeoxychorismate synthase 39348 40619 -1
CDS pabA ZP_06904169.1 HMPREF0219_2692 anthranilate synthase 40621 41205 -1
CDS - ZP_06904170.1 HMPREF0219_2693 oligosaccharide deacetylase 41228 41947 -1
CDS - ZP_06904171.1 HMPREF0219_2694 hypothetical protein 41975 43063 -1
CDS - ZP_06904172.1 HMPREF0219_2695 MORN repeat protein 43180 43989 -1
CDS - ZP_06904173.1 HMPREF0219_2696 hypothetical protein 44231 45097 -1
CDS - ZP_06904174.1 HMPREF0219_2697 murein hydrolase export regulator 45617 46306 -1
CDS lrgA ZP_06904175.1 HMPREF0219_2698 murein hydrolase regulator LrgA 46299 46670 -1
CDS - ZP_06904176.1 HMPREF0219_2699 probable multiprotein complex assembly protein 46852 48249 -1
CDS - ZP_06904177.1 HMPREF0219_2700 probable sigma-54-dependent transcriptional regulator 48380 48973 -1
CDS - ZP_06904178.1 HMPREF0219_2701 VanW like protein 49038 50492 -1
CDS ubiD ZP_06904179.1 HMPREF0219_2702 UbiD family decarboxylase 50607 51998 -1
CDS - ZP_06904180.1 HMPREF0219_2703 hypothetical protein 52164 52412 -1
CDS ahpC ZP_06904181.1 HMPREF0219_2704 peroxiredoxin 52678 54807 1
CDS - ZP_06904182.1 HMPREF0219_2705 probable ribonuclease 55020 55619 -1
CDS - ZP_06904183.1 HMPREF0219_2706 exonuclease superfamily protein 55636 58755 -1
CDS pdaA ZP_06904184.1 HMPREF0219_2707 delta-lactam-biosynthetic de-N-acetylase 58978 59802 1
CDS - ZP_06904185.1 HMPREF0219_2708 hypothetical protein 59898 60683 -1
CDS - ZP_06904186.1 HMPREF0219_2709 hypothetical protein 60783 60917 -1
CDS - ZP_06904187.1 HMPREF0219_2710 Mg2+ transporter-C family protein 61320 61994 1
CDS - ZP_06904188.1 HMPREF0219_2711 hypothetical protein 62480 62689 1
CDS - ZP_06904189.1 HMPREF0219_2712 MerR family transcriptional regulator 62798 63607 -1
CDS - ZP_06904190.1 HMPREF0219_2713 probable signaling protein 64383 66617 1
CDS - ZP_06904191.1 HMPREF0219_2714 probable signaling protein 66648 67493 1
CDS - ZP_06904192.1 HMPREF0219_2715 probable signaling protein 67733 69466 1
CDS - ZP_06904193.1 HMPREF0219_2716 phage integrase family prophage LambdaCh01 69933 70277 1
CDS - ZP_06904194.1 HMPREF0219_2717 MOP/MATE family multidrug-resistance efflux pump 70468 71823 1
CDS - ZP_06904195.1 HMPREF0219_2718 ANH superfamily adenosine nucleotide alpha hydrolase 71941 72609 -1
CDS - ZP_06904196.1 HMPREF0219_2719 hypothetical protein 72676 73104 -1
CDS - ZP_06904197.1 HMPREF0219_2720 hypothetical protein 73216 73809 1
CDS - ZP_06904198.1 HMPREF0219_2721 radical SAM protein 73920 74864 1
CDS - ZP_06904199.1 HMPREF0219_2722 hypothetical protein 75166 76110 -1
CDS - ZP_06904200.1 HMPREF0219_2723 sensory box sigma-54 dependent DNA-binding response regulator 76428 77870 1
CDS - ZP_06904201.1 HMPREF0219_2724 hypothetical protein 78070 78654 1
CDS - ZP_06904202.1 HMPREF0219_2725 HAD-superfamily hydrolase 78748 79527 -1
CDS cinA ZP_06904203.1 HMPREF0219_2726 competence/damage-inducible protein CinA 79585 80841 -1
CDS ddl ZP_06904204.1 HMPREF0219_2727 D-alanine--D-alanine ligase 81099 81998 1
CDS - ZP_06904205.1 HMPREF0219_2728 transcriptional regulator 82022 83470 1
CDS - ZP_06904206.1 HMPREF0219_2729 hypothetical protein 83529 84335 1
CDS - ZP_06904207.1 HMPREF0219_2730 ABC superfamily ATP binding cassette transporter, ABC protein 84325 85540 1