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Clostridium difficile NAP07 contig00232, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS nudF ZP_06904400.1 HMPREF0219_2923 ADP-ribose diphosphatase 94 630 -1
CDS - ZP_06904401.1 HMPREF0219_2924 hypothetical protein 632 1699 -1
CDS - ZP_06904402.1 HMPREF0219_2925 glycosyl transferase 1704 2528 -1
CDS wcaA ZP_06904403.1 HMPREF0219_2926 group 2 glycosyltransferase 2536 3228 -1
CDS - ZP_06904404.1 HMPREF0219_2927 hypothetical protein 3252 4127 -1
CDS - ZP_06904405.1 HMPREF0219_2928 thiamin pyrophosphokinase 4145 5266 -1
CDS spo0A ZP_06904406.1 HMPREF0219_2929 sporulation transcription factor Spo0A 5678 6502 -1
CDS spoIVB ZP_06904407.1 HMPREF0219_2930 SpoIVB peptidase 6644 7702 -1
CDS bltD ZP_06904408.1 HMPREF0219_2931 diamine N-acetyltransferase 7845 8303 1
CDS - ZP_06904409.1 HMPREF0219_2932 acetyltransferase 8364 8855 1
CDS - ZP_06904410.1 HMPREF0219_2933 hypothetical protein 8948 9814 -1
CDS recN ZP_06904411.1 HMPREF0219_2934 DNA repair protein RecN 10029 11690 -1
CDS tlyA ZP_06904412.1 HMPREF0219_2935 hemolysin A 11728 12540 -1
CDS dxs ZP_06904413.1 HMPREF0219_2936 1-deoxy-D-xylulose-5-phosphate synthase 12673 14538 -1
CDS - ZP_06904414.1 HMPREF0219_2937 acid phosphatase/vanadium-dependent haloperoxidase 14572 15009 -1
CDS ggpS1 ZP_06904415.1 HMPREF0219_2938 Farnesyltranstransferase 15039 15926 -1
CDS xseB ZP_06904416.1 HMPREF0219_2939 exodeoxyribonuclease VII small subunit 15929 16144 -1
CDS xseA ZP_06904417.1 HMPREF0219_2940 exodeoxyribonuclease VII large subunit 16146 17351 -1
CDS - ZP_06904418.1 HMPREF0219_2941 O-sialoglycoprotein endopeptidase 17348 18418 -1
CDS nusB ZP_06904419.1 HMPREF0219_2942 transcription antitermination factor NusB 18402 18908 -1
CDS asp ZP_06904420.1 HMPREF0219_2943 alkaline shock protein 18993 19355 -1
CDS spoIIIAH ZP_06904421.1 HMPREF0219_2944 probable stage III sporulation protein AH 19465 20151 -1
CDS spoIIIAG ZP_06904422.1 HMPREF0219_2945 stage III sporulation protein AG 20178 20732 -1
CDS spoIIIAF ZP_06904423.1 HMPREF0219_2946 probable stage III sporulation protein AF 20744 21361 -1
CDS spoIIIAE ZP_06904424.1 HMPREF0219_2947 stage III sporulation protein AE 21420 22631 -1
CDS spoIIIAD ZP_06904425.1 HMPREF0219_2948 stage III sporulation protein AD 22710 23096 -1
CDS spoIIIAC ZP_06904426.1 HMPREF0219_2949 stage III sporulation protein AC 23112 23324 -1
CDS spoIIIAB ZP_06904427.1 HMPREF0219_2950 stage III sporulation protein AB 23326 23847 -1
CDS spoIIIAA ZP_06904428.1 HMPREF0219_2951 stage III sporulation protein AA 23837 24805 -1
CDS fbp ZP_06904429.1 HMPREF0219_2952 fructose-1,6-bisphosphatase 25031 27016 -1
CDS - ZP_06904430.1 HMPREF0219_2953 GNAT family acetyltransferase 27105 27680 -1
CDS - ZP_06904431.1 HMPREF0219_2954 amino acid permease 27850 29163 -1
CDS - ZP_06904432.1 HMPREF0219_2955 glutamine amidotransferase class-I domain protein 29186 29911 -1
CDS - ZP_06904433.1 HMPREF0219_2956 hypothetical protein 29946 30191 -1
CDS - ZP_06904434.1 HMPREF0219_2957 sigma-54 dependent transcriptional regulator 30540 32540 -1
CDS - ZP_06904435.1 HMPREF0219_2958 probable signaling protein 32571 34289 -1
CDS fabF ZP_06904436.1 HMPREF0219_2959 3-oxoacyl-(acyl-carrier-protein) synthase II 34508 35746 -1
CDS acpP ZP_06904437.1 HMPREF0219_2960 acyl carrier protein 35775 35999 -1
CDS fabG2 ZP_06904438.1 HMPREF0219_2961 3-oxoacyl-[acyl-carrier-protein] reductase 36062 36811 -1
CDS fabD ZP_06904439.1 HMPREF0219_2962 malonyl-CoA-[acyl-carrier-protein] transacylase 36811 37761 -1
CDS fabK ZP_06904440.1 HMPREF0219_2963 trans-2-enoyl-ACP reductase 37777 38706 -1
CDS fabH ZP_06904441.1 HMPREF0219_2964 beta-ketoacyl-acyl-carrier-protein synthase I 38815 39801 -1
CDS plsX ZP_06904442.1 HMPREF0219_2965 fatty acid/phospholipid synthesis protein PlsX 39827 40849 -1
CDS fapR ZP_06904443.1 HMPREF0219_2966 fatty acid biosynthesis transcriptional regulator 40860 41417 -1
CDS rpmF ZP_06904444.1 HMPREF0219_2967 50S ribosomal protein L32 41624 41800 -1
CDS - ZP_06904445.1 HMPREF0219_2968 hypothetical protein 41825 42349 -1
CDS ackA ZP_06904446.1 HMPREF0219_2969 acetate kinase 42442 43638 -1
CDS - ZP_06904447.1 HMPREF0219_2970 hypothetical protein 44091 45371 1
CDS glcD ZP_06904448.1 HMPREF0219_2971 glycolate oxidase 45634 47073 -1
CDS etfA3 ZP_06904449.1 HMPREF0219_2972 electron transfer flavoprotein alpha subunit 47036 48256 -1
CDS etfB3 ZP_06904450.1 HMPREF0219_2973 electron transfer flavoprotein beta subunit 48270 49058 -1
CDS - ZP_06904451.1 HMPREF0219_2974 hypothetical protein 49075 50349 -1
CDS - ZP_06904452.1 HMPREF0219_2975 FadR family transcriptional regulator 50467 51180 -1
CDS - ZP_06904453.1 HMPREF0219_2976 possible sporulation integral membrane protein YlbJ 51305 52564 1
CDS - ZP_06904454.1 HMPREF0219_2977 phage integrase family site-specific recombinase 52831 53397 1
CDS hom3 ZP_06904455.1 HMPREF0219_2978 homoserine dehydrogenase 53596 54801 -1
CDS - ZP_06904456.1 HMPREF0219_2979 RNA-binding protein 55102 55470 -1
CDS cgtA ZP_06904457.1 HMPREF0219_2980 obg family GTPase CgtA 55522 56808 -1
CDS rpmA ZP_06904458.1 HMPREF0219_2981 50S ribosomal protein L27 56910 57200 -1
CDS - ZP_06904459.1 HMPREF0219_2982 hypothetical protein 57214 57531 -1
CDS rplU ZP_06904460.1 HMPREF0219_2983 50S ribosomal protein L21 57546 57857 -1
CDS rng ZP_06904461.1 HMPREF0219_2984 ribonuclease G and E 57958 59379 -1
CDS - ZP_06904462.1 HMPREF0219_2985 hypothetical protein 59397 60098 -1
CDS - ZP_06904463.1 HMPREF0219_2986 radical SAM domain protein 60100 61944 -1
CDS - ZP_06904464.1 HMPREF0219_2987 hypothetical protein 61941 62060 -1
CDS - ZP_06904465.1 HMPREF0219_2988 metallo-beta-lactamase 62263 63456 1
CDS - ZP_06904466.1 HMPREF0219_2989 hypothetical protein 63460 63627 -1
CDS - ZP_06904467.1 HMPREF0219_2990 hypothetical protein 63668 64030 -1
CDS - ZP_06904468.1 HMPREF0219_2991 hypothetical protein 64433 65224 -1
CDS - ZP_06904469.1 HMPREF0219_2992 PadR family transcriptional regulator 65228 65557 -1
CDS mgsA ZP_06904470.1 HMPREF0219_2993 methylglyoxal synthase 66042 66455 -1
CDS ftsW2 ZP_06904471.1 HMPREF0219_2994 FtsW/RodA/SpoVE family peptidoglycan biosynthesis protein 66496 67587 -1
CDS minE ZP_06904472.1 HMPREF0219_2995 cell division topological specificity factor MinE 67710 67994 -1
CDS minD ZP_06904473.1 HMPREF0219_2996 septum site-determining protein MinD 68012 68809 -1
CDS minC ZP_06904474.1 HMPREF0219_2997 septum site-determining protein MinC 68833 69516 -1
CDS ftsI2 ZP_06904475.1 HMPREF0219_2998 cell division protein FtsI/penicillin-binding protein 2 69614 72592 -1
CDS mreD ZP_06904476.1 HMPREF0219_2999 rod shape-determining protein MreD 72604 73092 -1
CDS - ZP_06904477.1 HMPREF0219_3000 probable rod shape-determining protein 73107 74000 -1
CDS ppx3 ZP_06904478.1 HMPREF0219_3001 exopolyphosphatase 74010 75071 -1
CDS radC ZP_06904479.1 HMPREF0219_3002 DNA repair protein RadC 75141 75848 -1
CDS maf ZP_06904480.1 HMPREF0219_3003 septum formation protein Maf 75845 76429 -1
CDS rnfB ZP_06904481.1 HMPREF0219_3004 electron transport complex protein RnfB 76649 77620 -1
CDS nqrE ZP_06904482.1 HMPREF0219_3005 Na(+)-translocating NADH-quinone reductase subunit E 77636 78211 -1
CDS nqrD ZP_06904483.1 HMPREF0219_3006 Na(+)-translocating NADH-quinone reductase subunit D 78226 78819 -1
CDS rnfG ZP_06904484.1 HMPREF0219_3007 electron transport complex protein RnfG 78832 79401 -1
CDS nqrB ZP_06904485.1 HMPREF0219_3008 Na(+)-translocating NADH-quinone reductase subunit B 79401 80378 -1
CDS nqrA ZP_06904486.1 HMPREF0219_3009 Na(+)-translocating NADH-quinone reductase subunit A 80401 81738 -1
CDS - ZP_06904487.1 HMPREF0219_3010 hypothetical protein 81954 82898 -1
CDS - ZP_06904488.1 HMPREF0219_3011 probable cell wall hydrolase 83009 84283 -1
CDS gloA2 ZP_06904489.1 HMPREF0219_3012 lactoylglutathione lyase 84415 84786 -1
CDS - ZP_06904490.1 HMPREF0219_3013 hypothetical protein 84867 85016 1
CDS - ZP_06904491.1 HMPREF0219_3014 hypothetical protein 85013 85612 -1
CDS - ZP_06904492.1 HMPREF0219_3015 MerTP family mercury (Hg2+) permease, binding protein MerP 85813 86025 -1
CDS - ZP_06904493.1 HMPREF0219_3016 ABC superfamily ATP binding cassette transporter, binding protein 86098 87813 -1
CDS - ZP_06904494.1 HMPREF0219_3017 soluble lytic murein transglycosylase 87813 88367 -1
CDS coaE ZP_06904495.1 HMPREF0219_3018 dephospho-CoA kinase 88360 88962 -1
CDS polA ZP_06904496.1 HMPREF0219_3019 DNA-directed DNA polymerase I 88971 91619 -1
tRNA - - HMPREF0219_t0023 tRNA-Leu 91938 92020 1
CDS wssH ZP_06904497.1 HMPREF0219_3020 cellulose acetylase 92617 94119 1
CDS - ZP_06904498.1 HMPREF0219_3021 hypothetical protein 94135 95328 1