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Clostridium difficile NAP08 contig00009, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06891042.1 HMPREF0220_0287 FtsK/SpoIIIE family protein 161 1543 1
CDS - EFH08666.1 HMPREF0220_0287 - 161 1543 1
CDS - ZP_06891043.1 HMPREF0220_0288 conserved hypothetical protein 1547 1963 1
CDS - EFH08667.1 HMPREF0220_0288 - 1547 1963 1
CDS - ZP_06891044.1 HMPREF0220_0289 cro/CI family transcriptional regulator 2208 3404 1
CDS - EFH08668.1 HMPREF0220_0289 - 2208 3404 1
CDS - ZP_06891045.1 HMPREF0220_0290 conjugative transposon protein 3416 3550 1
CDS - EFH08669.1 HMPREF0220_0290 - 3416 3550 1
CDS - ZP_06891046.1 HMPREF0220_0291 conjugative transposon protein 3551 3772 1
CDS - EFH08670.1 HMPREF0220_0291 - 3551 3772 1
CDS - ZP_06891047.1 HMPREF0220_0292 possible ribosomal-protein-alanine N-acetyltransferase 3849 4322 1
CDS - EFH08671.1 HMPREF0220_0292 - 3849 4322 1
CDS - ZP_06891048.1 HMPREF0220_0293 antirestriction protein 4638 5141 1
CDS - EFH08672.1 HMPREF0220_0293 - 4638 5141 1
CDS - ZP_06891049.1 HMPREF0220_0294 antirestriction protein 5159 5662 1
CDS - EFH08673.1 HMPREF0220_0294 - 5159 5662 1
CDS - ZP_06891050.1 HMPREF0220_0295 conjugative transposon protein 5808 6170 1
CDS - EFH08674.1 HMPREF0220_0295 - 5808 6170 1
CDS - ZP_06891051.1 HMPREF0220_0296 conjugative transposon protein 6148 8598 1
CDS - EFH08675.1 HMPREF0220_0296 - 6148 8598 1
CDS - ZP_06891052.1 HMPREF0220_0297 conjugative transposon protein 8598 10808 1
CDS - EFH08676.1 HMPREF0220_0297 - 8598 10808 1
CDS - ZP_06891053.1 HMPREF0220_0298 NLP/P60 family protein 10805 11812 1
CDS - EFH08677.1 HMPREF0220_0298 - 10805 11812 1
CDS - ZP_06891054.1 HMPREF0220_0299 conjugative transposon protein 11829 12740 1
CDS - EFH08678.1 HMPREF0220_0299 - 11829 12740 1
CDS - ZP_06891055.1 HMPREF0220_0300 AraC family transcriptional regulator 12853 13812 1
CDS - EFH08679.1 HMPREF0220_0300 - 12853 13812 1
CDS ndvA2 ZP_06891056.1 HMPREF0220_0301 ABC superfamily ATP binding cassette transporter, ABC/membrane protein 13936 15753 1
CDS ndvA2 EFH08680.1 HMPREF0220_0301 - 13936 15753 1
CDS - ZP_06891057.1 HMPREF0220_0302 conserved hypothetical protein 15755 15913 1
CDS - EFH08681.1 HMPREF0220_0302 - 15755 15913 1
CDS - ZP_06891058.1 HMPREF0220_0303 conserved hypothetical protein 16368 16817 -1
CDS - EFH08682.1 HMPREF0220_0303 - 16368 16817 -1
CDS - ZP_06891059.1 HMPREF0220_0304 conserved hypothetical protein 17184 17555 -1
CDS - EFH08683.1 HMPREF0220_0304 - 17184 17555 -1
CDS - ZP_06891060.1 HMPREF0220_0305 conserved hypothetical protein 17674 17925 -1
CDS - EFH08684.1 HMPREF0220_0305 - 17674 17925 -1
CDS - ZP_06891061.1 HMPREF0220_0306 riboflavin biosynthesis protein RibD domain protein 18587 19282 -1
CDS - EFH08685.1 HMPREF0220_0306 - 18587 19282 -1
CDS - ZP_06891062.1 HMPREF0220_0307 hypothetical protein 19357 19713 -1
CDS - EFH08686.1 HMPREF0220_0307 - 19357 19713 -1
CDS - ZP_06891063.1 HMPREF0220_0308 DeoR family transcriptional regulator 19737 20309 -1
CDS - EFH08687.1 HMPREF0220_0308 - 19737 20309 -1
CDS aphA ZP_06891064.1 HMPREF0220_0309 3',5' aminoglycoside phosphotransferase 20585 21379 -1
CDS aphA EFH08688.1 HMPREF0220_0309 - 20585 21379 -1
CDS - ZP_06891065.1 HMPREF0220_0310 streptothricin acetyltransferase 21472 22014 -1
CDS - EFH08689.1 HMPREF0220_0310 - 21472 22014 -1
CDS aadE2 ZP_06891066.1 HMPREF0220_0311 aminoglycoside 6-adenylyltransferase 22011 22919 -1
CDS aadE2 EFH08690.1 HMPREF0220_0311 - 22011 22919 -1
CDS - ZP_06891067.1 HMPREF0220_0312 UbiE/COQ5 family methyltransferase 22952 23686 -1
CDS - EFH08691.1 HMPREF0220_0312 - 22952 23686 -1
CDS - ZP_06891068.1 HMPREF0220_0313 DNA polymerase, beta family region 23667 24536 -1
CDS - EFH08692.1 HMPREF0220_0313 - 23667 24536 -1
CDS - ZP_06891069.1 HMPREF0220_0314 phage integrase family site-specific recombinase 24891 26462 -1
CDS - EFH08693.1 HMPREF0220_0314 - 24891 26462 -1
CDS - ZP_06891070.1 HMPREF0220_0315 phage integrase family site-specific recombinase 26466 26879 -1
CDS - EFH08694.1 HMPREF0220_0315 - 26466 26879 -1
CDS - ZP_06891071.1 HMPREF0220_0316 phage integrase family site-specific recombinase 26880 28430 -1
CDS - EFH08695.1 HMPREF0220_0316 - 26880 28430 -1
CDS lmrA ZP_06891072.1 HMPREF0220_0317 multidrug resistance ABC transporter ATP-binding and permease protein 28480 30213 1
CDS lmrA EFH08696.1 HMPREF0220_0317 - 28480 30213 1
CDS - ZP_06891073.1 HMPREF0220_0318 conserved hypothetical protein 30340 30564 1
CDS - EFH08697.1 HMPREF0220_0318 - 30340 30564 1
CDS - ZP_06891074.1 HMPREF0220_0319 region 4 superfamily sigma-70 30698 31273 1
CDS - EFH08698.1 HMPREF0220_0319 - 30698 31273 1
CDS - ZP_06891075.1 HMPREF0220_0320 hypothetical protein 31388 31648 -1
CDS - EFH08699.1 HMPREF0220_0320 - 31388 31648 -1
CDS - ZP_06891076.1 HMPREF0220_0321 excisionase 31881 32084 1
CDS - EFH08700.1 HMPREF0220_0321 - 31881 32084 1
CDS - ZP_06891077.1 HMPREF0220_0322 transposase 32163 33353 1
CDS - EFH08701.1 HMPREF0220_0322 - 32163 33353 1
CDS - ZP_06891078.1 HMPREF0220_0323 two component sensor histidine kinase 33627 34787 -1
CDS - EFH08702.1 HMPREF0220_0323 - 33627 34787 -1
CDS - ZP_06891079.1 HMPREF0220_0324 response regulator 34775 35449 -1
CDS - EFH08703.1 HMPREF0220_0324 - 34775 35449 -1
CDS - ZP_06891080.1 HMPREF0220_0325 carbon-nitrogen family hydrolase 36242 37069 -1
CDS - EFH08704.1 HMPREF0220_0325 - 36242 37069 -1
CDS sugE ZP_06891081.1 HMPREF0220_0326 quaternary ammonium compound-resistance protein SugE 37451 37771 1
CDS sugE EFH08705.1 HMPREF0220_0326 - 37451 37771 1
CDS purC ZP_06891082.1 HMPREF0220_0327 phosphoribosylaminoimidazole-succinocarboxamide synthetase 37901 38581 -1
CDS purC EFH08706.1 HMPREF0220_0327 - 37901 38581 -1
CDS - ZP_06891083.1 HMPREF0220_0328 possible galactitol-1-phosphate 5-dehydrogenase 38977 40029 1
CDS - EFH08707.1 HMPREF0220_0328 - 38977 40029 1
CDS - ZP_06891084.1 HMPREF0220_0329 PTS system, IIA component 40075 40491 1
CDS - EFH08708.1 HMPREF0220_0329 - 40075 40491 1
CDS sorB2 ZP_06891085.1 HMPREF0220_0330 PTS family mannose/fructose/sorbose porter, IIB component 40520 40993 1
CDS sorB2 EFH08709.1 HMPREF0220_0330 - 40520 40993 1
CDS - ZP_06891086.1 HMPREF0220_0331 PTS family mannose/fructose/sorbose porter, IIC component 41050 41808 1
CDS - EFH08710.1 HMPREF0220_0331 - 41050 41808 1
CDS - ZP_06891087.1 HMPREF0220_0332 PTS family mannose/fructose/sorbose porter, IID component 41832 42671 1
CDS - EFH08711.1 HMPREF0220_0332 - 41832 42671 1
CDS - ZP_06891088.1 HMPREF0220_0333 DNA-binding response regulator 43106 43753 1
CDS - EFH08712.1 HMPREF0220_0333 - 43106 43753 1
CDS - ZP_06891089.1 HMPREF0220_0334 two component system histidine kinase 43746 45140 1
CDS - EFH08713.1 HMPREF0220_0334 - 43746 45140 1