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Clostridium difficile NAP08 contig00012, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS cheY ZP_06891109.1 HMPREF0220_0354 chemotaxis response regulator CheY 649 1011 1
CDS cheY EFH08610.1 HMPREF0220_0354 - 649 1011 1
CDS cheC ZP_06891110.1 HMPREF0220_0355 chemotaxis protein CheC 1172 1693 1
CDS cheC EFH08611.1 HMPREF0220_0355 - 1172 1693 1
CDS cheD ZP_06891111.1 HMPREF0220_0356 protein-glutamine glutaminase 1690 2175 1
CDS cheD EFH08612.1 HMPREF0220_0356 - 1690 2175 1
CDS - ZP_06891112.1 HMPREF0220_0357 chemotaxis protein 2218 2736 1
CDS - EFH08613.1 HMPREF0220_0357 - 2218 2736 1
CDS - ZP_06891113.1 HMPREF0220_0358 probable chemosensory protein 2872 3831 1
CDS - EFH08614.1 HMPREF0220_0358 - 2872 3831 1
CDS - ZP_06891114.1 HMPREF0220_0359 probable methyl accpeting chemotaxis protein 3857 5560 1
CDS - EFH08615.1 HMPREF0220_0359 - 3857 5560 1
CDS cheA ZP_06891115.1 HMPREF0220_0360 chemotaxis histidine kinase CheA 5731 7833 1
CDS cheA EFH08616.1 HMPREF0220_0360 - 5731 7833 1
CDS cheW ZP_06891116.1 HMPREF0220_0361 CheW protein 7846 8286 1
CDS cheW EFH08617.1 HMPREF0220_0361 - 7846 8286 1
CDS cheR ZP_06891117.1 HMPREF0220_0362 protein-glutamate O-methyltransferase 8322 9125 1
CDS cheR EFH08618.1 HMPREF0220_0362 - 8322 9125 1
CDS cheB ZP_06891118.1 HMPREF0220_0363 protein-glutamate methylesterase 9165 9761 1
CDS cheB EFH08619.1 HMPREF0220_0363 - 9165 9761 1
CDS - ZP_06891119.1 HMPREF0220_0364 conserved hypothetical protein 9867 10724 1
CDS - EFH08620.1 HMPREF0220_0364 - 9867 10724 1
CDS ocd2 ZP_06891120.1 HMPREF0220_0365 possible ornithine cyclodeaminase 10792 11781 1
CDS ocd2 EFH08621.1 HMPREF0220_0365 - 10792 11781 1
CDS - ZP_06891121.1 HMPREF0220_0366 probable lipoprotein 11873 12484 1
CDS - EFH08622.1 HMPREF0220_0366 - 11873 12484 1
CDS - ZP_06891122.1 HMPREF0220_0367 brp/Blh family beta-carotene 15,15'-monooxygenase 12928 13725 1
CDS - EFH08623.1 HMPREF0220_0367 - 12928 13725 1
CDS - ZP_06891123.1 HMPREF0220_0368 BlaI/MecI/CopY family transcriptional regulator 13891 14289 1
CDS - EFH08624.1 HMPREF0220_0368 - 13891 14289 1
CDS - ZP_06891124.1 HMPREF0220_0369 probable penicillin-binding protein 14300 15658 1
CDS - EFH08625.1 HMPREF0220_0369 - 14300 15658 1
CDS - ZP_06891125.1 HMPREF0220_0370 conserved hypothetical protein 15874 16284 1
CDS - EFH08626.1 HMPREF0220_0370 - 15874 16284 1
CDS - ZP_06891126.1 HMPREF0220_0371 conserved hypothetical protein 17485 18141 1
CDS - EFH08627.1 HMPREF0220_0371 - 17485 18141 1
CDS sleC ZP_06891127.1 HMPREF0220_0372 spore cortex-lytic enzyme SleC 18615 19886 -1
CDS sleC EFH08628.1 HMPREF0220_0372 - 18615 19886 -1
CDS - ZP_06891128.1 HMPREF0220_0373 probable spore-cortex-lytic protein 20123 20839 1
CDS - EFH08629.1 HMPREF0220_0373 - 20123 20839 1
CDS sun2 ZP_06891129.1 HMPREF0220_0374 NOL1/NOP2/sun family protein 20918 22228 1
CDS sun2 EFH08630.1 HMPREF0220_0374 - 20918 22228 1
CDS spsB ZP_06891130.1 HMPREF0220_0375 signal peptidase I 22328 22864 1
CDS spsB EFH08631.1 HMPREF0220_0375 - 22328 22864 1
CDS spsB2 ZP_06891131.1 HMPREF0220_0376 possible signal peptidase I 23030 23566 1
CDS spsB2 EFH08632.1 HMPREF0220_0376 - 23030 23566 1
CDS - ZP_06891132.1 HMPREF0220_0377 family 2 AP endonuclease 23576 24331 1
CDS - EFH08633.1 HMPREF0220_0377 - 23576 24331 1
CDS udk ZP_06891133.1 HMPREF0220_0378 phosphoribulokinase 24405 26072 1
CDS udk EFH08634.1 HMPREF0220_0378 - 24405 26072 1
CDS glsA ZP_06891134.1 HMPREF0220_0379 glutaminase 26654 27583 1
CDS glsA EFH08635.1 HMPREF0220_0379 - 26654 27583 1
CDS - ZP_06891135.1 HMPREF0220_0380 conserved hypothetical protein 27681 28244 1
CDS - EFH08636.1 HMPREF0220_0380 - 27681 28244 1
CDS nfo ZP_06891136.1 HMPREF0220_0381 deoxyribonuclease IV (phage-T(4)-induced) 28727 29563 1
CDS nfo EFH08637.1 HMPREF0220_0381 - 28727 29563 1
CDS - ZP_06891137.1 HMPREF0220_0382 aldo/keto reductase family oxidoreductase 29834 30841 1
CDS - EFH08638.1 HMPREF0220_0382 - 29834 30841 1
CDS - ZP_06891138.1 HMPREF0220_0383 endodeoxyribonuclease 31075 31491 -1
CDS - EFH08639.1 HMPREF0220_0383 - 31075 31491 -1
CDS - ZP_06891139.1 HMPREF0220_0384 probable iron-sulfur cluster protein 32237 33151 1
CDS - EFH08640.1 HMPREF0220_0384 - 32237 33151 1
CDS lon2 ZP_06891140.1 HMPREF0220_0385 ATP-dependent protease La 33257 35494 1
CDS lon2 EFH08641.1 HMPREF0220_0385 - 33257 35494 1
CDS nth ZP_06891141.1 HMPREF0220_0386 endonuclease III 35692 36549 1
CDS nth EFH08642.1 HMPREF0220_0386 - 35692 36549 1
CDS - ZP_06891142.1 HMPREF0220_0387 RNA methyltransferase 36743 37213 1
CDS - EFH08643.1 HMPREF0220_0387 - 36743 37213 1
CDS - ZP_06891143.1 HMPREF0220_0388 possible spore protein YitS 37248 38096 1
CDS - EFH08644.1 HMPREF0220_0388 - 37248 38096 1
CDS - ZP_06891144.1 HMPREF0220_0389 basic membrane protein 38384 39388 1
CDS - EFH08645.1 HMPREF0220_0389 - 38384 39388 1
CDS - ZP_06891145.1 HMPREF0220_0390 probable outer membrane lipoprotein 39514 39842 1
CDS - EFH08646.1 HMPREF0220_0390 - 39514 39842 1