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Clostridium difficile NAP08 contig00013, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06891146.1 HMPREF0220_0391 basic membrane protein 1 776 1
CDS - EFH08525.1 HMPREF0220_0391 - 1 776 1
CDS - ZP_06891147.1 HMPREF0220_0392 conserved hypothetical protein 931 1692 1
CDS - EFH08526.1 HMPREF0220_0392 - 931 1692 1
CDS - ZP_06891148.1 HMPREF0220_0393 conserved hypothetical protein 1695 2513 1
CDS - EFH08527.1 HMPREF0220_0393 - 1695 2513 1
CDS - ZP_06891149.1 HMPREF0220_0394 probable membrane protin 2692 3294 1
CDS - EFH08528.1 HMPREF0220_0394 - 2692 3294 1
CDS thrS ZP_06891150.1 HMPREF0220_0395 threonine--tRNA ligase 3994 6006 1
CDS thrS EFH08529.1 HMPREF0220_0395 - 3994 6006 1
CDS - ZP_06891151.1 HMPREF0220_0396 conserved hypothetical protein 6731 7822 1
CDS - EFH08530.1 HMPREF0220_0396 - 6731 7822 1
CDS - ZP_06891152.1 HMPREF0220_0397 PadR family transcriptional regulator 8170 8367 -1
CDS - EFH08531.1 HMPREF0220_0397 - 8170 8367 -1
CDS virS ZP_06891153.1 HMPREF0220_0398 sensor histidine kinase VirS 8727 10067 1
CDS virS EFH08532.1 HMPREF0220_0398 - 8727 10067 1
CDS - ZP_06891154.1 HMPREF0220_0399 HD phosphohydrolase family protein 10409 11032 -1
CDS - EFH08533.1 HMPREF0220_0399 - 10409 11032 -1
CDS - ZP_06891155.1 HMPREF0220_0400 MFS family major facilitator transporter, macrolide:cation symporter (or antiporter or uniporter) 11139 12062 -1
CDS - EFH08534.1 HMPREF0220_0400 - 11139 12062 -1
CDS - ZP_06891156.1 HMPREF0220_0401 hypothetical protein 12398 12631 -1
CDS - EFH08535.1 HMPREF0220_0401 - 12398 12631 -1
CDS - ZP_06891157.1 HMPREF0220_0402 TetR family transcriptional regulator 12682 13260 -1
CDS - EFH08536.1 HMPREF0220_0402 - 12682 13260 -1
CDS gapN ZP_06891158.1 HMPREF0220_0403 glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) 13561 15021 1
CDS gapN EFH08537.1 HMPREF0220_0403 - 13561 15021 1
CDS - ZP_06891159.1 HMPREF0220_0404 TetR family transcriptional regulator 15390 15995 1
CDS - EFH08538.1 HMPREF0220_0404 - 15390 15995 1
CDS pps ZP_06891160.1 HMPREF0220_0405 pyruvate phosphate dikinase 15992 18565 1
CDS pps EFH08539.1 HMPREF0220_0405 - 15992 18565 1
CDS - ZP_06891161.1 HMPREF0220_0406 antigen 18558 18722 1
CDS - EFH08540.1 HMPREF0220_0406 - 18558 18722 1
CDS - ZP_06891162.1 HMPREF0220_0407 probable signaling protein 18825 20909 -1
CDS - EFH08541.1 HMPREF0220_0407 - 18825 20909 -1
CDS - ZP_06891163.1 HMPREF0220_0408 probable signaling protein 20957 22186 -1
CDS - EFH08542.1 HMPREF0220_0408 - 20957 22186 -1
CDS - ZP_06891164.1 HMPREF0220_0409 probable signaling protein 22188 23369 -1
CDS - EFH08543.1 HMPREF0220_0409 - 22188 23369 -1
CDS - ZP_06891165.1 HMPREF0220_0410 conserved hypothetical protein 24496 24771 1
CDS - EFH08544.1 HMPREF0220_0410 - 24496 24771 1
CDS - ZP_06891166.1 HMPREF0220_0411 conserved hypothetical protein 24791 25078 1
CDS - EFH08545.1 HMPREF0220_0411 - 24791 25078 1
CDS - ZP_06891167.1 HMPREF0220_0412 ChvD family ATP-binding cassette protein 25498 28014 1
CDS - EFH08546.1 HMPREF0220_0412 - 25498 28014 1
CDS - ZP_06891168.1 HMPREF0220_0413 conserved hypothetical protein 28029 33239 1
CDS - EFH08547.1 HMPREF0220_0413 - 28029 33239 1
CDS - ZP_06891169.1 HMPREF0220_0414 conserved hypothetical protein 33752 33943 -1
CDS - EFH08548.1 HMPREF0220_0414 - 33752 33943 -1
CDS cvpA ZP_06891170.1 HMPREF0220_0415 TM2 domain protein 34119 34325 1
CDS cvpA EFH08549.1 HMPREF0220_0415 - 34119 34325 1
CDS - ZP_06891171.1 HMPREF0220_0416 conserved hypothetical protein 34495 34935 -1
CDS - EFH08550.1 HMPREF0220_0416 - 34495 34935 -1
CDS - ZP_06891172.1 HMPREF0220_0417 possible phosphoadenosine phosphosulfate sulfotransferase 35270 36583 1
CDS - EFH08551.1 HMPREF0220_0417 - 35270 36583 1
CDS ibrB ZP_06891173.1 HMPREF0220_0418 immunoglobulin-binding regulator B 36601 37137 1
CDS ibrB EFH08552.1 HMPREF0220_0418 - 36601 37137 1
CDS - ZP_06891174.1 HMPREF0220_0419 conserved hypothetical protein 37635 37856 1
CDS - EFH08553.1 HMPREF0220_0419 - 37635 37856 1
CDS - ZP_06891175.1 HMPREF0220_0420 spore coat peptide assembly protein cotJB 37856 38119 1
CDS - EFH08554.1 HMPREF0220_0420 - 37856 38119 1
CDS cotJC3 ZP_06891176.1 HMPREF0220_0421 CotJC protein 38183 38755 1
CDS cotJC3 EFH08555.1 HMPREF0220_0421 - 38183 38755 1
CDS - ZP_06891177.1 HMPREF0220_0422 methylated-DNA--protein-cysteine methyltransferase 39547 40200 1
CDS - EFH08556.1 HMPREF0220_0422 - 39547 40200 1
CDS ogt2 ZP_06891178.1 HMPREF0220_0423 methylated-DNA--[protein]-cysteine S-methyltransferase 40362 40895 1
CDS ogt2 EFH08557.1 HMPREF0220_0423 - 40362 40895 1
CDS - ZP_06891179.1 HMPREF0220_0424 conserved hypothetical protein 41086 41217 1
CDS - EFH08558.1 HMPREF0220_0424 - 41086 41217 1
CDS - ZP_06891180.1 HMPREF0220_0425 conserved hypothetical protein 41449 42234 -1
CDS - EFH08559.1 HMPREF0220_0425 - 41449 42234 -1
CDS - ZP_06891181.1 HMPREF0220_0426 conserved hypothetical protein 42698 43111 1
CDS - EFH08560.1 HMPREF0220_0426 - 42698 43111 1
CDS grpB ZP_06891182.1 HMPREF0220_0427 conserved hypothetical protein 43149 43721 1
CDS grpB EFH08561.1 HMPREF0220_0427 - 43149 43721 1
CDS - ZP_06891183.1 HMPREF0220_0428 voltage-gated chloride channel family protein 43882 45456 1
CDS - EFH08562.1 HMPREF0220_0428 - 43882 45456 1
CDS - ZP_06891184.1 HMPREF0220_0429 conserved hypothetical protein 46145 46750 -1
CDS - EFH08563.1 HMPREF0220_0429 - 46145 46750 -1
CDS - ZP_06891185.1 HMPREF0220_0430 conserved hypothetical protein 47121 47690 1
CDS - EFH08564.1 HMPREF0220_0430 - 47121 47690 1
CDS - ZP_06891186.1 HMPREF0220_0431 two component sensor histidine kinase 48027 49301 -1
CDS - EFH08565.1 HMPREF0220_0431 - 48027 49301 -1
CDS - ZP_06891187.1 HMPREF0220_0432 conserved hypothetical protein 49595 49771 -1
CDS - EFH08566.1 HMPREF0220_0432 - 49595 49771 -1
CDS - ZP_06891188.1 HMPREF0220_0433 TetR family transcriptional regulator 49875 50525 -1
CDS - EFH08567.1 HMPREF0220_0433 - 49875 50525 -1
CDS - ZP_06891189.1 HMPREF0220_0434 MerR family transcriptional regulator 50579 51403 -1
CDS - EFH08568.1 HMPREF0220_0434 - 50579 51403 -1
CDS - ZP_06891190.1 HMPREF0220_0435 CAAX amino protease 51569 52462 -1
CDS - EFH08569.1 HMPREF0220_0435 - 51569 52462 -1
CDS - ZP_06891191.1 HMPREF0220_0436 LytTr DNA-binding domain protein 52716 53153 -1
CDS - EFH08570.1 HMPREF0220_0436 - 52716 53153 -1
CDS - ZP_06891192.1 HMPREF0220_0437 conserved hypothetical protein 53410 53559 -1
CDS - EFH08571.1 HMPREF0220_0437 - 53410 53559 -1
CDS - ZP_06891193.1 HMPREF0220_0438 conserved hypothetical protein 53564 53803 -1
CDS - EFH08572.1 HMPREF0220_0438 - 53564 53803 -1
CDS - ZP_06891194.1 HMPREF0220_0439 conserved hypothetical protein 54128 54349 -1
CDS - EFH08573.1 HMPREF0220_0439 - 54128 54349 -1
CDS - ZP_06891195.1 HMPREF0220_0440 probable phage-related regulatory protein 54928 55185 1
CDS - EFH08574.1 HMPREF0220_0440 - 54928 55185 1