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Clostridium difficile NAP08 contig00017, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06891270.1 HMPREF0220_0515 U32 family peptidase 254 2809 1
CDS - EFH08375.1 HMPREF0220_0515 - 254 2809 1
CDS - ZP_06891271.1 HMPREF0220_0516 hydrolase 2913 3491 1
CDS - EFH08376.1 HMPREF0220_0516 - 2913 3491 1
CDS mutX ZP_06891272.1 HMPREF0220_0517 mutator MutX protein 3525 4001 1
CDS mutX EFH08377.1 HMPREF0220_0517 - 3525 4001 1
CDS - ZP_06891273.1 HMPREF0220_0518 nitroreductase fused to ferredoxin domain protein 4535 5356 1
CDS - EFH08378.1 HMPREF0220_0518 - 4535 5356 1
CDS - ZP_06891274.1 HMPREF0220_0519 probable signaling protein 5578 8094 1
CDS - EFH08379.1 HMPREF0220_0519 - 5578 8094 1
CDS pepD ZP_06891275.1 HMPREF0220_0520 possible Xaa-His dipeptidase 8298 9749 -1
CDS pepD EFH08380.1 HMPREF0220_0520 - 8298 9749 -1
CDS ppx ZP_06891276.1 HMPREF0220_0521 exopolyphosphatase 10066 12444 1
CDS ppx EFH08381.1 HMPREF0220_0521 - 10066 12444 1
CDS - ZP_06891277.1 HMPREF0220_0522 purine nucleoside phosphorylase 12512 12925 1
CDS - EFH08382.1 HMPREF0220_0522 - 12512 12925 1
CDS argS ZP_06891278.1 HMPREF0220_0523 arginine--tRNA ligase 13251 14951 1
CDS argS EFH08383.1 HMPREF0220_0523 - 13251 14951 1
CDS - ZP_06891279.1 HMPREF0220_0524 conserved hypothetical protein 15205 16128 1
CDS - EFH08384.1 HMPREF0220_0524 - 15205 16128 1
CDS - ZP_06891280.1 HMPREF0220_0525 conserved hypothetical protein 16133 16339 -1
CDS - EFH08385.1 HMPREF0220_0525 - 16133 16339 -1
CDS - ZP_06891281.1 HMPREF0220_0526 radical SAM domain protein 16475 18229 1
CDS - EFH08386.1 HMPREF0220_0526 - 16475 18229 1
CDS - ZP_06891282.1 HMPREF0220_0527 conserved hypothetical protein 18247 19389 1
CDS - EFH08387.1 HMPREF0220_0527 - 18247 19389 1
CDS - ZP_06891283.1 HMPREF0220_0528 LysR family transcriptional regulator 19563 20501 -1
CDS - EFH08388.1 HMPREF0220_0528 - 19563 20501 -1
CDS maa ZP_06891284.1 HMPREF0220_0529 maltose O-acetyltransferase 20727 21305 1
CDS maa EFH08389.1 HMPREF0220_0529 - 20727 21305 1
CDS ptb2 ZP_06891285.1 HMPREF0220_0530 phosphate butyryltransferase 21420 22331 1
CDS ptb2 EFH08390.1 HMPREF0220_0530 - 21420 22331 1
CDS cooS1 ZP_06891286.1 HMPREF0220_0531 carbon-monoxide dehydrogenase (acceptor) 22938 24857 1
CDS cooS1 EFH08391.1 HMPREF0220_0531 - 22938 24857 1
CDS cooC ZP_06891287.1 HMPREF0220_0532 CO dehydrogenase/acetyl-CoA synthase complex 25154 25945 1
CDS cooC EFH08392.1 HMPREF0220_0532 - 25154 25945 1
CDS fhs ZP_06891288.1 HMPREF0220_0533 formate--tetrahydrofolate ligase 26176 27870 1
CDS fhs EFH08393.1 HMPREF0220_0533 - 26176 27870 1
CDS fchA ZP_06891289.1 HMPREF0220_0534 methenyltetrahydrofolate cyclohydrolase 27955 28587 1
CDS fchA EFH08394.1 HMPREF0220_0534 - 27955 28587 1
CDS folD ZP_06891290.1 HMPREF0220_0535 bifunctional methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase 28679 29551 1
CDS folD EFH08395.1 HMPREF0220_0535 - 28679 29551 1
CDS - ZP_06891291.1 HMPREF0220_0536 zinc-finger protein 29586 30260 1
CDS - EFH08396.1 HMPREF0220_0536 - 29586 30260 1
CDS - ZP_06891292.1 HMPREF0220_0537 methylenetetrahydrofolate reductase 30296 31177 1
CDS - EFH08397.1 HMPREF0220_0537 - 30296 31177 1
CDS lpd ZP_06891293.1 HMPREF0220_0538 dihydrolipoyl dehydrogenase 31221 32606 1
CDS lpd EFH08398.1 HMPREF0220_0538 - 31221 32606 1
CDS cooC2 ZP_06891294.1 HMPREF0220_0539 CO dehydrogenase/acetyl-CoA synthase complex 32662 33432 1
CDS cooC2 EFH08399.1 HMPREF0220_0539 - 32662 33432 1
CDS acsD ZP_06891295.1 HMPREF0220_0540 corrinoid/iron-sulfur protein 33452 34396 1
CDS acsD EFH08400.1 HMPREF0220_0540 - 33452 34396 1
CDS acsC ZP_06891296.1 HMPREF0220_0541 corrinoid/iron-sulfur protein 34427 35794 1
CDS acsC EFH08401.1 HMPREF0220_0541 - 34427 35794 1
CDS - ZP_06891297.1 HMPREF0220_0542 probable carbon monoxide dehydrogenase/acetyl-CoA synthase complex,methyltransferase subunit 35844 36650 1
CDS - EFH08402.1 HMPREF0220_0542 - 35844 36650 1
CDS acsB ZP_06891298.1 HMPREF0220_0543 CO dehydrogenase/acetyl-CoA synthase complex 36707 38833 1
CDS acsB EFH08403.1 HMPREF0220_0543 - 36707 38833 1
CDS gcvH ZP_06891299.1 HMPREF0220_0544 glycine cleavage system H protein 38920 39297 1
CDS gcvH EFH08404.1 HMPREF0220_0544 - 38920 39297 1
CDS - ZP_06891300.1 HMPREF0220_0545 iron-sulfur cluster binding protein 39409 41337 1
CDS - EFH08405.1 HMPREF0220_0545 - 39409 41337 1
CDS - ZP_06891301.1 HMPREF0220_0546 radical SAM domain protein 41362 42234 1
CDS - EFH08406.1 HMPREF0220_0546 - 41362 42234 1
CDS - ZP_06891302.1 HMPREF0220_0547 radical SAM domain protein 42231 43169 1
CDS - EFH08407.1 HMPREF0220_0547 - 42231 43169 1
CDS - ZP_06891303.1 HMPREF0220_0548 biotin/lipoate A/B protein ligase 43216 44031 1
CDS - EFH08408.1 HMPREF0220_0548 - 43216 44031 1
CDS - ZP_06891304.1 HMPREF0220_0549 conserved hypothetical protein 44182 44373 1
CDS - EFH08409.1 HMPREF0220_0549 - 44182 44373 1
CDS - ZP_06891305.1 HMPREF0220_0550 conserved hypothetical protein 44392 44808 1
CDS - EFH08410.1 HMPREF0220_0550 - 44392 44808 1
CDS - ZP_06891306.1 HMPREF0220_0551 conserved hypothetical protein 44824 45174 1
CDS - EFH08411.1 HMPREF0220_0551 - 44824 45174 1
CDS hisK ZP_06891307.1 HMPREF0220_0552 histidinol-phosphatase 45443 46222 1
CDS hisK EFH08412.1 HMPREF0220_0552 - 45443 46222 1
CDS - ZP_06891308.1 HMPREF0220_0553 conserved hypothetical protein 46538 47413 -1
CDS - EFH08413.1 HMPREF0220_0553 - 46538 47413 -1
CDS - ZP_06891309.1 HMPREF0220_0554 conserved hypothetical protein 47965 48477 1
CDS - EFH08414.1 HMPREF0220_0554 - 47965 48477 1
CDS - ZP_06891310.1 HMPREF0220_0555 class V superfamily aminotransferase 48782 49879 -1
CDS - EFH08415.1 HMPREF0220_0555 - 48782 49879 -1
CDS glpK2 ZP_06891311.1 HMPREF0220_0556 glycerol kinase 50172 51698 1
CDS glpK2 EFH08416.1 HMPREF0220_0556 - 50172 51698 1
CDS eutH2 ZP_06891312.1 HMPREF0220_0557 ethanolamine utilization protein EutH 51739 52854 1
CDS eutH2 EFH08417.1 HMPREF0220_0557 - 51739 52854 1
CDS - ZP_06891313.1 HMPREF0220_0558 DeoR family transcriptional regulator 53135 53899 -1
CDS - EFH08418.1 HMPREF0220_0558 - 53135 53899 -1
tRNA - - HMPREF0220_t0001 tRNA-Ser 54158 54248 1
tRNA - - HMPREF0220_t0001 tRNA-Ser 54158 54248 1
CDS motA ZP_06891314.1 HMPREF0220_0559 chemotaxis MotA protein 54336 55124 1
CDS motA EFH08419.1 HMPREF0220_0559 - 54336 55124 1
CDS motB ZP_06891315.1 HMPREF0220_0560 chemotaxis protein MotB 55145 55885 1
CDS motB EFH08420.1 HMPREF0220_0560 - 55145 55885 1
CDS - ZP_06891316.1 HMPREF0220_0561 conserved hypothetical protein 56063 56431 1
CDS - EFH08421.1 HMPREF0220_0561 - 56063 56431 1
CDS - ZP_06891317.1 HMPREF0220_0562 probable lipoprotein 56523 57983 1
CDS - EFH08422.1 HMPREF0220_0562 - 56523 57983 1
CDS - ZP_06891318.1 HMPREF0220_0563 GGDEF domain/EAL domain protein 58036 61065 1
CDS - EFH08423.1 HMPREF0220_0563 - 58036 61065 1