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Clostridium difficile NAP08 contig00024, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06891446.1 HMPREF0220_0691 carbohydrate kinase 790 2370 1
CDS - EFH08225.1 HMPREF0220_0691 - 790 2370 1
CDS - ZP_06891447.1 HMPREF0220_0692 nodulation efficiency protein D 2540 2986 1
CDS - EFH08226.1 HMPREF0220_0692 - 2540 2986 1
CDS - ZP_06891448.1 HMPREF0220_0693 SPFH domain/Band 7 family protein 3007 4050 1
CDS - EFH08227.1 HMPREF0220_0693 - 3007 4050 1
CDS glgC ZP_06891449.1 HMPREF0220_0694 glucose-1-phosphate adenylyltransferase 4819 5979 1
CDS glgC EFH08228.1 HMPREF0220_0694 - 4819 5979 1
CDS glgD ZP_06891450.1 HMPREF0220_0695 glucose-1-phosphate adenylyltransferase 5981 7111 1
CDS glgD EFH08229.1 HMPREF0220_0695 - 5981 7111 1
CDS glgA ZP_06891451.1 HMPREF0220_0696 starch synthase 7140 8582 1
CDS glgA EFH08230.1 HMPREF0220_0696 - 7140 8582 1
CDS glgP ZP_06891452.1 HMPREF0220_0697 glycogen phosphorylase 8575 11016 1
CDS glgP EFH08231.1 HMPREF0220_0697 - 8575 11016 1
CDS - ZP_06891453.1 HMPREF0220_0698 amylopullulanase 11021 12886 1
CDS - EFH08232.1 HMPREF0220_0698 - 11021 12886 1
CDS - ZP_06891454.1 HMPREF0220_0699 GntR family transcriptional regulator 13117 13770 1
CDS - EFH08233.1 HMPREF0220_0699 - 13117 13770 1
CDS speA ZP_06891455.1 HMPREF0220_0700 arginine decarboxylase 14387 15898 1
CDS speA EFH08234.1 HMPREF0220_0700 - 14387 15898 1
CDS speD ZP_06891456.1 HMPREF0220_0701 S-adenosylmethionine decarboxylase proenzyme 15985 16398 1
CDS speD EFH08235.1 HMPREF0220_0701 - 15985 16398 1
CDS speE ZP_06891457.1 HMPREF0220_0702 spermidine synthase 16428 17279 1
CDS speE EFH08236.1 HMPREF0220_0702 - 16428 17279 1
CDS speB ZP_06891458.1 HMPREF0220_0703 agmatinase 17269 18147 1
CDS speB EFH08237.1 HMPREF0220_0703 - 17269 18147 1
CDS cspA2 ZP_06891459.1 HMPREF0220_0704 cold shock protein CspA 18327 18527 -1
CDS cspA2 EFH08238.1 HMPREF0220_0704 - 18327 18527 -1
CDS - ZP_06891460.1 HMPREF0220_0705 periplasmic hydrogenase 1 18955 20484 1
CDS - EFH08239.1 HMPREF0220_0705 - 18955 20484 1
CDS - ZP_06891461.1 HMPREF0220_0706 periplasmic hydrogenase 1 20764 22260 1
CDS - EFH08240.1 HMPREF0220_0706 - 20764 22260 1
CDS - ZP_06891462.1 HMPREF0220_0707 metallo-beta-lactamase superfamily exported protein 22394 23308 1
CDS - EFH08241.1 HMPREF0220_0707 - 22394 23308 1
CDS - ZP_06891463.1 HMPREF0220_0708 conserved hypothetical protein 23426 23617 1
CDS - EFH08242.1 HMPREF0220_0708 - 23426 23617 1
CDS - ZP_06891464.1 HMPREF0220_0709 conserved hypothetical protein 23839 24189 1
CDS - EFH08243.1 HMPREF0220_0709 - 23839 24189 1
CDS - ZP_06891465.1 HMPREF0220_0710 ATP-dependent Zn protease 24450 25955 1
CDS - EFH08244.1 HMPREF0220_0710 - 24450 25955 1
CDS dinB2 ZP_06891466.1 HMPREF0220_0711 DNA-directed DNA polymerase IV 26351 27448 1
CDS dinB2 EFH08245.1 HMPREF0220_0711 - 26351 27448 1
CDS opuAA ZP_06891467.1 HMPREF0220_0712 glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, ABC protein 27711 28847 1
CDS opuAA EFH08246.1 HMPREF0220_0712 - 27711 28847 1
CDS - ZP_06891468.1 HMPREF0220_0713 glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, membrane protein 28840 30387 1
CDS - EFH08247.1 HMPREF0220_0713 - 28840 30387 1
CDS - ZP_06891469.1 HMPREF0220_0714 cation efflux family protein 30638 31531 1
CDS - EFH08248.1 HMPREF0220_0714 - 30638 31531 1
CDS - ZP_06891470.1 HMPREF0220_0715 aldo/keto reductase 31672 32814 1
CDS - EFH08249.1 HMPREF0220_0715 - 31672 32814 1
CDS - ZP_06891471.1 HMPREF0220_0716 conserved hypothetical protein 33198 34436 1
CDS - EFH08250.1 HMPREF0220_0716 - 33198 34436 1
CDS - ZP_06891472.1 HMPREF0220_0717 UbiA family prenyltransferase 34465 35352 1
CDS - EFH08251.1 HMPREF0220_0717 - 34465 35352 1
CDS - ZP_06891473.1 HMPREF0220_0718 HAD-superfamily hydrolase 35386 36015 1
CDS - EFH08252.1 HMPREF0220_0718 - 35386 36015 1
CDS - ZP_06891474.1 HMPREF0220_0719 conserved hypothetical protein 36020 36484 1
CDS - EFH08253.1 HMPREF0220_0719 - 36020 36484 1
CDS - ZP_06891475.1 HMPREF0220_0720 MATE efflux family protein 36734 38101 1
CDS - EFH08254.1 HMPREF0220_0720 - 36734 38101 1
CDS - ZP_06891476.1 HMPREF0220_0721 possible ribosomal protein S1 38301 39575 1
CDS - EFH08255.1 HMPREF0220_0721 - 38301 39575 1
CDS - ZP_06891477.1 HMPREF0220_0722 probable hydrolase 39693 40412 1
CDS - EFH08256.1 HMPREF0220_0722 - 39693 40412 1
CDS - ZP_06891478.1 HMPREF0220_0723 conserved hypothetical protein 40433 40879 1
CDS - EFH08257.1 HMPREF0220_0723 - 40433 40879 1
CDS leuA2 ZP_06891479.1 HMPREF0220_0724 2-isopropylmalate synthase 41397 43139 1
CDS leuA2 EFH08258.1 HMPREF0220_0724 - 41397 43139 1
CDS leuC ZP_06891480.1 HMPREF0220_0725 3-isopropylmalate dehydratase large subunit 43096 44373 1
CDS leuC EFH08259.1 HMPREF0220_0725 - 43096 44373 1
CDS leuD ZP_06891481.1 HMPREF0220_0726 3-isopropylmalate dehydratase small subunit 44373 44879 1
CDS leuD EFH08260.1 HMPREF0220_0726 - 44373 44879 1
CDS leuB ZP_06891482.1 HMPREF0220_0727 3-isopropylmalate dehydrogenase 44886 45956 1
CDS leuB EFH08261.1 HMPREF0220_0727 - 44886 45956 1
CDS - ZP_06891483.1 HMPREF0220_0728 probable thioesterase 46319 46834 1
CDS - EFH08262.1 HMPREF0220_0728 - 46319 46834 1
CDS - ZP_06891484.1 HMPREF0220_0729 possible serine--pyruvate transaminase 47207 48283 1
CDS - EFH08263.1 HMPREF0220_0729 - 47207 48283 1
CDS serA ZP_06891485.1 HMPREF0220_0730 phosphoglycerate dehydrogenase 48523 49464 1
CDS serA EFH08264.1 HMPREF0220_0730 - 48523 49464 1
CDS - ZP_06891486.1 HMPREF0220_0731 conserved hypothetical protein 49496 50746 1
CDS - EFH08265.1 HMPREF0220_0731 - 49496 50746 1
CDS - ZP_06891487.1 HMPREF0220_0732 conserved hypothetical protein 50962 51291 1
CDS - EFH08266.1 HMPREF0220_0732 - 50962 51291 1
CDS - ZP_06891488.1 HMPREF0220_0733 probable signaling protein 51561 55109 1
CDS - EFH08267.1 HMPREF0220_0733 - 51561 55109 1
CDS - ZP_06891489.1 HMPREF0220_0734 radical SAM domain protein 55294 57228 1
CDS - EFH08268.1 HMPREF0220_0734 - 55294 57228 1
CDS - ZP_06891490.1 HMPREF0220_0735 ABC superfamily ATP binding cassette transporter, substrate-binding lipoprotein 57334 58329 1
CDS - EFH08269.1 HMPREF0220_0735 - 57334 58329 1
CDS - ZP_06891491.1 HMPREF0220_0736 ABC superfamily ATP binding cassette transporter, permease protein 58301 59086 1
CDS - EFH08270.1 HMPREF0220_0736 - 58301 59086 1
CDS tauB3 ZP_06891492.1 HMPREF0220_0737 taurine ABC superfamily ATP binding cassette transporter, ABC protein 59074 59772 1
CDS tauB3 EFH08271.1 HMPREF0220_0737 - 59074 59772 1
CDS ybaK ZP_06891493.1 HMPREF0220_0738 YbaK/ebsC protein 59895 60368 1
CDS ybaK EFH08272.1 HMPREF0220_0738 - 59895 60368 1
CDS fumA ZP_06891494.1 HMPREF0220_0739 fumarate hydratase 60565 61404 1
CDS fumA EFH08273.1 HMPREF0220_0739 - 60565 61404 1
CDS fumB ZP_06891495.1 HMPREF0220_0740 fumarate hydratase 61417 61965 1
CDS fumB EFH08274.1 HMPREF0220_0740 - 61417 61965 1