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Clostridium difficile NAP08 contig00025, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS amiD9 ZP_06891531.1 HMPREF0220_0776 N-acetylmuramoyl-L-alanine amidase 187 939 -1
CDS amiD9 EFH08186.1 HMPREF0220_0776 - 187 939 -1
CDS rpsI ZP_06891532.1 HMPREF0220_0777 30S ribosomal protein S9 1400 1792 -1
CDS rpsI EFH08187.1 HMPREF0220_0777 - 1400 1792 -1
CDS rplM ZP_06891533.1 HMPREF0220_0778 50S ribosomal protein L13 1821 2252 -1
CDS rplM EFH08188.1 HMPREF0220_0778 - 1821 2252 -1
CDS truA ZP_06891534.1 HMPREF0220_0779 tRNA-pseudouridine synthase I 2372 3103 -1
CDS truA EFH08189.1 HMPREF0220_0779 - 2372 3103 -1
CDS cbiQ2 ZP_06891535.1 HMPREF0220_0780 cobalt ABC superfamily ATP binding cassette transporter, membrane protein 3136 3939 -1
CDS cbiQ2 EFH08190.1 HMPREF0220_0780 - 3136 3939 -1
CDS - ZP_06891536.1 HMPREF0220_0781 cobalt ABC superfamily ATP binding cassette transporter, ABC protein 3933 4799 -1
CDS - EFH08191.1 HMPREF0220_0781 - 3933 4799 -1
CDS - ZP_06891537.1 HMPREF0220_0782 cobalt ABC superfamily ATP binding cassette transporter, ABC protein 4787 5620 -1
CDS - EFH08192.1 HMPREF0220_0782 - 4787 5620 -1
CDS rplQ ZP_06891538.1 HMPREF0220_0783 50S ribosomal protein L17 5740 6081 -1
CDS rplQ EFH08193.1 HMPREF0220_0783 - 5740 6081 -1
CDS rpoA ZP_06891539.1 HMPREF0220_0784 DNA-directed RNA polymerase subunit alpha 6102 7049 -1
CDS rpoA EFH08194.1 HMPREF0220_0784 - 6102 7049 -1
CDS rpsD ZP_06891540.1 HMPREF0220_0785 30S ribosomal protein S4 7127 7750 -1
CDS rpsD EFH08195.1 HMPREF0220_0785 - 7127 7750 -1
CDS rpsK ZP_06891541.1 HMPREF0220_0786 30S ribosomal protein S11 7782 8180 -1
CDS rpsK EFH08196.1 HMPREF0220_0786 - 7782 8180 -1
CDS rpsM ZP_06891542.1 HMPREF0220_0787 30S ribosomal protein S13 8216 8587 -1
CDS rpsM EFH08197.1 HMPREF0220_0787 - 8216 8587 -1
CDS rpmJ ZP_06891543.1 HMPREF0220_0788 50S ribosomal protein L36 8740 8853 -1
CDS rpmJ EFH08198.1 HMPREF0220_0788 - 8740 8853 -1
CDS infA ZP_06891544.1 HMPREF0220_0789 translation initiation factor IF-1 8889 9107 -1
CDS infA EFH08199.1 HMPREF0220_0789 - 8889 9107 -1
CDS - ZP_06891545.1 HMPREF0220_0790 probable ribosomal protein 9145 9423 -1
CDS - EFH08200.1 HMPREF0220_0790 - 9145 9423 -1
CDS map1 ZP_06891546.1 HMPREF0220_0791 methionine aminopeptidase 9436 10182 -1
CDS map1 EFH08201.1 HMPREF0220_0791 - 9436 10182 -1
CDS adk ZP_06891547.1 HMPREF0220_0792 adenylate kinase 10183 10848 -1
CDS adk EFH08202.1 HMPREF0220_0792 - 10183 10848 -1
CDS secY ZP_06891548.1 HMPREF0220_0793 preprotein translocase subunit SecY 10850 12118 -1
CDS secY EFH08203.1 HMPREF0220_0793 - 10850 12118 -1
CDS rplO ZP_06891549.1 HMPREF0220_0794 50S ribosomal protein L15 12162 12605 -1
CDS rplO EFH08204.1 HMPREF0220_0794 - 12162 12605 -1
CDS rpmD ZP_06891550.1 HMPREF0220_0795 50S ribosomal protein L30 12638 12823 -1
CDS rpmD EFH08205.1 HMPREF0220_0795 - 12638 12823 -1
CDS rpsE ZP_06891551.1 HMPREF0220_0796 30S ribosomal protein S5 12838 13347 -1
CDS rpsE EFH08206.1 HMPREF0220_0796 - 12838 13347 -1
CDS rplR ZP_06891552.1 HMPREF0220_0797 50S ribosomal protein L18 13368 13736 -1
CDS rplR EFH08207.1 HMPREF0220_0797 - 13368 13736 -1
CDS rplF ZP_06891553.1 HMPREF0220_0798 50S ribosomal protein L6 13772 14314 -1
CDS rplF EFH08208.1 HMPREF0220_0798 - 13772 14314 -1
CDS rpsH ZP_06891554.1 HMPREF0220_0799 30S ribosomal protein S8 14345 14743 -1
CDS rpsH EFH08209.1 HMPREF0220_0799 - 14345 14743 -1
CDS rpsN ZP_06891555.1 HMPREF0220_0800 ribosomal protein S14p/S29e 14776 14961 -1
CDS rpsN EFH08210.1 HMPREF0220_0800 - 14776 14961 -1
CDS rplE ZP_06891556.1 HMPREF0220_0801 50S ribosomal protein L5 14979 15521 -1
CDS rplE EFH08211.1 HMPREF0220_0801 - 14979 15521 -1
CDS rplX ZP_06891557.1 HMPREF0220_0802 50S ribosomal protein L24 15551 15859 -1
CDS rplX EFH08212.1 HMPREF0220_0802 - 15551 15859 -1
CDS rplN ZP_06891558.1 HMPREF0220_0803 50S ribosomal protein L14 15880 16248 -1
CDS rplN EFH08213.1 HMPREF0220_0803 - 15880 16248 -1
CDS rpsQ ZP_06891559.1 HMPREF0220_0804 30S ribosomal protein S17 16274 16528 -1
CDS rpsQ EFH08214.1 HMPREF0220_0804 - 16274 16528 -1
CDS rpmC EFH08215.1 HMPREF0220_0805 - 16552 16755 -1
CDS rpmC ZP_06891560.1 HMPREF0220_0805 50S ribosomal protein L29 16552 16755 -1
CDS rplP ZP_06891561.1 HMPREF0220_0806 50S ribosomal protein L16 16757 17188 -1
CDS rplP EFH08216.1 HMPREF0220_0806 - 16757 17188 -1
CDS rpsC ZP_06891562.1 HMPREF0220_0807 30S ribosomal protein S3 17224 18039 -1
CDS rpsC EFH08217.1 HMPREF0220_0807 - 17224 18039 -1
CDS rplV ZP_06891563.1 HMPREF0220_0808 50S ribosomal protein L22 18063 18422 -1
CDS rplV EFH08218.1 HMPREF0220_0808 - 18063 18422 -1
CDS rpsS ZP_06891564.1 HMPREF0220_0809 30S ribosomal protein S19 18430 18711 -1
CDS rpsS EFH08219.1 HMPREF0220_0809 - 18430 18711 -1
CDS rplB ZP_06891565.1 HMPREF0220_0810 50S ribosomal protein L2 18746 19576 -1
CDS rplB EFH08220.1 HMPREF0220_0810 - 18746 19576 -1
CDS rplW ZP_06891566.1 HMPREF0220_0811 50S ribosomal protein L23 19606 19896 -1
CDS rplW EFH08221.1 HMPREF0220_0811 - 19606 19896 -1
CDS rplD ZP_06891567.1 HMPREF0220_0812 ribosomal protein L4/L1 family protein 19896 20549 -1
CDS rplD EFH08222.1 HMPREF0220_0812 - 19896 20549 -1
CDS rplC ZP_06891568.1 HMPREF0220_0813 50S ribosomal protein L3 20549 21178 -1
CDS rplC EFH08223.1 HMPREF0220_0813 - 20549 21178 -1
CDS rpsJ ZP_06891569.1 HMPREF0220_0814 30S ribosomal protein S10 21270 21581 -1
CDS rpsJ EFH08224.1 HMPREF0220_0814 - 21270 21581 -1