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Clostridium difficile NAP08 contig00032, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS aspC ZP_06891799.1 HMPREF0220_1044 aspartate transaminase 1 384 1
CDS aspC EFH07878.1 HMPREF0220_1044 - 1 384 1
CDS - ZP_06891800.1 HMPREF0220_1045 membrane spanning protein 407 931 1
CDS - EFH07879.1 HMPREF0220_1045 - 407 931 1
CDS - ZP_06891801.1 HMPREF0220_1046 conserved hypothetical protein 1031 1849 1
CDS - EFH07880.1 HMPREF0220_1046 - 1031 1849 1
CDS - ZP_06891802.1 HMPREF0220_1047 conserved hypothetical protein 1927 2238 1
CDS - EFH07881.1 HMPREF0220_1047 - 1927 2238 1
CDS - ZP_06891803.1 HMPREF0220_1048 conserved hypothetical protein 2415 3098 -1
CDS - EFH07882.1 HMPREF0220_1048 - 2415 3098 -1
CDS - ZP_06891804.1 HMPREF0220_1049 TetR family transcriptional regulator 3191 3841 -1
CDS - EFH07883.1 HMPREF0220_1049 - 3191 3841 -1
CDS gbeA ZP_06891805.1 HMPREF0220_1050 1,4-alpha-glucan branching enzyme 4006 6009 -1
CDS gbeA EFH07884.1 HMPREF0220_1050 - 4006 6009 -1
CDS recX ZP_06891806.1 HMPREF0220_1051 recombination regulator RecX 6162 6800 -1
CDS recX EFH07885.1 HMPREF0220_1051 - 6162 6800 -1
CDS nadD ZP_06891807.1 HMPREF0220_1052 nicotinate-nucleotide adenylyltransferase 7076 7765 1
CDS nadD EFH07886.1 HMPREF0220_1052 - 7076 7765 1
CDS - ZP_06891808.1 HMPREF0220_1053 HD domain protein 7766 8338 1
CDS - EFH07887.1 HMPREF0220_1053 - 7766 8338 1
CDS - ZP_06891809.1 HMPREF0220_1054 iojap-like protein 8455 8805 1
CDS - EFH07888.1 HMPREF0220_1054 - 8455 8805 1
CDS leuS ZP_06891810.1 HMPREF0220_1055 leucyl-tRNA synthetase 9159 11579 1
CDS leuS EFH07889.1 HMPREF0220_1055 - 9159 11579 1
CDS - ZP_06891811.1 HMPREF0220_1056 conserved hypothetical protein 11920 12981 1
CDS - EFH07890.1 HMPREF0220_1056 - 11920 12981 1
CDS - ZP_06891812.1 HMPREF0220_1057 conserved hypothetical protein 13710 14270 -1
CDS - EFH07891.1 HMPREF0220_1057 - 13710 14270 -1
CDS - ZP_06891813.1 HMPREF0220_1058 conserved hypothetical protein 14708 15379 1
CDS - EFH07892.1 HMPREF0220_1058 - 14708 15379 1
CDS - ZP_06891814.1 HMPREF0220_1059 hypothetical protein 15574 15768 1
CDS - EFH07893.1 HMPREF0220_1059 - 15574 15768 1
CDS - ZP_06891815.1 HMPREF0220_1060 possible asparaginase 16547 17542 -1
CDS - EFH07894.1 HMPREF0220_1060 - 16547 17542 -1
CDS - ZP_06891816.1 HMPREF0220_1061 aspartate aminotransferase 17663 19291 -1
CDS - EFH07895.1 HMPREF0220_1061 - 17663 19291 -1
CDS ilvA ZP_06891817.1 HMPREF0220_1062 threonine ammonia-lyase 19935 21176 1
CDS ilvA EFH07896.1 HMPREF0220_1062 - 19935 21176 1
CDS - ZP_06891818.1 HMPREF0220_1063 endoribonuclease inhibitor of translation 21271 21651 1
CDS - EFH07897.1 HMPREF0220_1063 - 21271 21651 1
CDS scrA ZP_06891819.1 HMPREF0220_1064 PTS family beta-glucosides porter, IIABC component 21937 22419 1
CDS scrA EFH07898.1 HMPREF0220_1064 - 21937 22419 1
CDS licT2 ZP_06891820.1 HMPREF0220_1065 BglG family transcriptional antiterminator 22440 23255 1
CDS licT2 EFH07899.1 HMPREF0220_1065 - 22440 23255 1
CDS glvC ZP_06891821.1 HMPREF0220_1066 PTS family porter, IIBC component 23308 24858 1
CDS glvC EFH07900.1 HMPREF0220_1066 - 23308 24858 1
CDS aglB ZP_06891822.1 HMPREF0220_1067 maltose-6'-phosphate glucosidase 24905 26257 1
CDS aglB EFH07901.1 HMPREF0220_1067 - 24905 26257 1
CDS - ZP_06891823.1 HMPREF0220_1068 AraC family transcription regulator 26358 26939 1
CDS - EFH07902.1 HMPREF0220_1068 - 26358 26939 1
CDS - ZP_06891824.1 HMPREF0220_1069 conserved hypothetical protein 26982 27146 1
CDS - EFH07903.1 HMPREF0220_1069 - 26982 27146 1
CDS - ZP_06891825.1 HMPREF0220_1070 conserved hypothetical protein 27193 27912 1
CDS - EFH07904.1 HMPREF0220_1070 - 27193 27912 1
CDS lmrB ZP_06891826.1 HMPREF0220_1071 lincomycin resistance protein LmrB 28036 29436 -1
CDS lmrB EFH07905.1 HMPREF0220_1071 - 28036 29436 -1
CDS - ZP_06891827.1 HMPREF0220_1072 TetR family transcriptional regulator 29440 30348 -1
CDS - EFH07906.1 HMPREF0220_1072 - 29440 30348 -1
CDS - ZP_06891828.1 HMPREF0220_1073 probable D-alanyl-D-alanine carboxypeptidase 30610 31257 1
CDS - EFH07907.1 HMPREF0220_1073 - 30610 31257 1
CDS atp2A1 ZP_06891829.1 HMPREF0220_1074 P-ATPase superfamily cation transporter 31582 34221 1
CDS atp2A1 EFH07908.1 HMPREF0220_1074 - 31582 34221 1
CDS hisC ZP_06891830.1 HMPREF0220_1075 histidinol-phosphate transaminase 34279 35382 -1
CDS hisC EFH07909.1 HMPREF0220_1075 - 34279 35382 -1
CDS - ZP_06891831.1 HMPREF0220_1076 IIB family HAD hydrolase 35743 36564 1
CDS - EFH07910.1 HMPREF0220_1076 - 35743 36564 1
CDS argH ZP_06891832.1 HMPREF0220_1077 argininosuccinate lyase 36932 38257 1
CDS argH EFH07911.1 HMPREF0220_1077 - 36932 38257 1
CDS - ZP_06891833.1 HMPREF0220_1078 conserved hypothetical protein 38489 38842 1
CDS - EFH07912.1 HMPREF0220_1078 - 38489 38842 1
CDS - ZP_06891834.1 HMPREF0220_1079 possible serine-type D-Ala-D-Ala carboxypeptidase 38967 40256 -1
CDS - EFH07913.1 HMPREF0220_1079 - 38967 40256 -1
CDS - ZP_06891835.1 HMPREF0220_1080 probable competence protein 40336 41040 1
CDS - EFH07914.1 HMPREF0220_1080 - 40336 41040 1
CDS selD ZP_06891836.1 HMPREF0220_1081 selenide, water dikinase 41228 42178 1
CDS selD EFH07915.1 HMPREF0220_1081 - 41228 42178 1
CDS selA ZP_06891837.1 HMPREF0220_1082 L-seryl-tRNA(Sec) selenium transferase 42196 43608 1
CDS selA EFH07916.1 HMPREF0220_1082 - 42196 43608 1
CDS selB ZP_06891838.1 HMPREF0220_1083 selenocysteine-specific translation elongation factor 43722 45605 1
CDS selB EFH07917.1 HMPREF0220_1083 - 43722 45605 1
CDS - ZP_06891839.1 HMPREF0220_1084 probable sensor histidine kinase 45710 48448 1
CDS - EFH07918.1 HMPREF0220_1084 - 45710 48448 1
CDS pmi ZP_06891840.1 HMPREF0220_1085 mannose-6-phosphate isomerase 48567 49511 -1
CDS pmi EFH07919.1 HMPREF0220_1085 - 48567 49511 -1
CDS - ZP_06891841.1 HMPREF0220_1086 probable peptidase 49684 51045 1
CDS - EFH07920.1 HMPREF0220_1086 - 49684 51045 1
CDS - ZP_06891842.1 HMPREF0220_1087 transcriptional antiterminator 51133 53022 1
CDS - EFH07921.1 HMPREF0220_1087 - 51133 53022 1
CDS - ZP_06891843.1 HMPREF0220_1088 PTS family fructose/mannitol (fru) porter component IIA 53037 53492 1
CDS - EFH07922.1 HMPREF0220_1088 - 53037 53492 1
CDS fryB ZP_06891844.1 HMPREF0220_1089 PTS family porter, enzyme I 53550 53867 1
CDS fryB EFH07923.1 HMPREF0220_1089 - 53550 53867 1
CDS - ZP_06891845.1 HMPREF0220_1090 PTS system, IIC component 53892 55154 1
CDS - EFH07924.1 HMPREF0220_1090 - 53892 55154 1
CDS pepQ ZP_06891846.1 HMPREF0220_1091 Xaa-Pro dipeptidase 55259 56323 1
CDS pepQ EFH07925.1 HMPREF0220_1091 - 55259 56323 1
CDS patB ZP_06891847.1 HMPREF0220_1092 PLP-dependent aminotransferase 56377 57555 1
CDS patB EFH07926.1 HMPREF0220_1092 - 56377 57555 1
CDS - ZP_06891848.1 HMPREF0220_1093 XRE family transcriptional regulator 57712 57948 1
CDS - EFH07927.1 HMPREF0220_1093 - 57712 57948 1