xBASE Logo
About | Contact | Home

Clostridium difficile NAP08 contig00033, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS cas6 ZP_06891878.1 HMPREF0220_1123 CRISPR-associated protein cas6 60 797 1
CDS cas6 EFH07714.1 HMPREF0220_1123 - 60 797 1
CDS - ZP_06891879.1 HMPREF0220_1124 conserved hypothetical protein 802 2268 1
CDS - EFH07715.1 HMPREF0220_1124 - 802 2268 1
CDS cst ZP_06891880.1 HMPREF0220_1125 devr family CRISPR-associated regulatory protein 2287 3300 1
CDS cst EFH07716.1 HMPREF0220_1125 - 2287 3300 1
CDS cas5 ZP_06891881.1 HMPREF0220_1126 CRISPR-associated protein cas5 3316 4113 1
CDS cas5 EFH07717.1 HMPREF0220_1126 - 3316 4113 1
CDS - ZP_06891882.1 HMPREF0220_1127 probable ATP-dependent helicase 4140 6548 1
CDS - EFH07718.1 HMPREF0220_1127 - 4140 6548 1
CDS prmA ZP_06891883.1 HMPREF0220_1128 ribosomal protein L11 methyltransferase 6987 7934 1
CDS prmA EFH07719.1 HMPREF0220_1128 - 6987 7934 1
CDS - ZP_06891884.1 HMPREF0220_1129 RsmE family RNA methyltransferase 7953 8711 1
CDS - EFH07720.1 HMPREF0220_1129 - 7953 8711 1
CDS miaB ZP_06891885.1 HMPREF0220_1130 2-methylthioadenine synthetase 8713 10011 1
CDS miaB EFH07721.1 HMPREF0220_1130 - 8713 10011 1
CDS hinT ZP_06891886.1 HMPREF0220_1131 purine nucleoside phosphoramidase 10054 10404 1
CDS hinT EFH07722.1 HMPREF0220_1131 - 10054 10404 1
CDS rpsU ZP_06891887.1 HMPREF0220_1132 30S ribosomal protein S21 10567 10746 1
CDS rpsU EFH07723.1 HMPREF0220_1132 - 10567 10746 1
CDS - ZP_06891888.1 HMPREF0220_1133 GatB/YqeY domain protein 10767 11219 1
CDS - EFH07724.1 HMPREF0220_1133 - 10767 11219 1
CDS - ZP_06891889.1 HMPREF0220_1134 TspO/MBR family protein 11330 11827 1
CDS - EFH07725.1 HMPREF0220_1134 - 11330 11827 1
CDS yfiA ZP_06891890.1 HMPREF0220_1135 ribosomal subunit interface protein 12020 12577 1
CDS yfiA EFH07726.1 HMPREF0220_1135 - 12020 12577 1
CDS - ZP_06891891.1 HMPREF0220_1136 conserved hypothetical protein 12785 13027 1
CDS - EFH07727.1 HMPREF0220_1136 - 12785 13027 1
CDS yqfD ZP_06891892.1 HMPREF0220_1137 sporulation protein YqfD 13040 14365 1
CDS yqfD EFH07728.1 HMPREF0220_1137 - 13040 14365 1
CDS - ZP_06891893.1 HMPREF0220_1138 PhoH family protein 14322 15419 1
CDS - EFH07729.1 HMPREF0220_1138 - 14322 15419 1
CDS - ZP_06891894.1 HMPREF0220_1139 metal-dependent hydrolase 15476 15937 1
CDS - EFH07730.1 HMPREF0220_1139 - 15476 15937 1
CDS dgkA ZP_06891895.1 HMPREF0220_1140 diacylglycerol kinase 15943 16662 1
CDS dgkA EFH07731.1 HMPREF0220_1140 - 15943 16662 1
CDS cdd ZP_06891896.1 HMPREF0220_1141 cytidine deaminase 16760 17182 1
CDS cdd EFH07732.1 HMPREF0220_1141 - 16760 17182 1
CDS era ZP_06891897.1 HMPREF0220_1142 GTP-binding protein Era 17247 18140 1
CDS era EFH07733.1 HMPREF0220_1142 - 17247 18140 1
CDS mgtE ZP_06891898.1 HMPREF0220_1143 MgtE family magnesium transporter 18152 19531 1
CDS mgtE EFH07734.1 HMPREF0220_1143 - 18152 19531 1
CDS - ZP_06891899.1 HMPREF0220_1144 conserved hypothetical protein 19604 19759 1
CDS - EFH07735.1 HMPREF0220_1144 - 19604 19759 1
CDS recO ZP_06891900.1 HMPREF0220_1145 recombination protein O 19922 20497 1
CDS recO EFH07736.1 HMPREF0220_1145 - 19922 20497 1
CDS - ZP_06891901.1 HMPREF0220_1146 conserved hypothetical protein 20487 21089 1
CDS - EFH07737.1 HMPREF0220_1146 - 20487 21089 1
CDS glyQ ZP_06891902.1 HMPREF0220_1147 glycyl-tRNA synthetase alpha subunit 21249 22127 1
CDS glyQ EFH07738.1 HMPREF0220_1147 - 21249 22127 1
CDS glyS ZP_06891903.1 HMPREF0220_1148 glycyl-tRNA synthetase beta subunit 22127 24193 1
CDS glyS EFH07739.1 HMPREF0220_1148 - 22127 24193 1
CDS - ZP_06891904.1 HMPREF0220_1149 ferredoxin-nitrite reductase 24360 25907 -1
CDS - EFH07740.1 HMPREF0220_1149 - 24360 25907 -1
CDS - ZP_06891905.1 HMPREF0220_1150 IclR family transcriptional regulator 26187 26954 1
CDS - EFH07741.1 HMPREF0220_1150 - 26187 26954 1
CDS - ZP_06891906.1 HMPREF0220_1151 probable oxidoreductase ferredoxin subunit 27239 27436 1
CDS - EFH07742.1 HMPREF0220_1151 - 27239 27436 1
CDS vorB ZP_06891907.1 HMPREF0220_1152 2-oxoglutarate oxidoreductase alpha subunit 27423 28541 1
CDS vorB EFH07743.1 HMPREF0220_1152 - 27423 28541 1
CDS - ZP_06891908.1 HMPREF0220_1153 keto/oxoacid ferredoxin oxidoreductase 28544 29263 1
CDS - EFH07744.1 HMPREF0220_1153 - 28544 29263 1
CDS - ZP_06891909.1 HMPREF0220_1154 probable oxidoreductase subunit 29276 29815 1
CDS - EFH07745.1 HMPREF0220_1154 - 29276 29815 1
CDS buk ZP_06891910.1 HMPREF0220_1155 butyrate kinase 29924 31030 1
CDS buk EFH07746.1 HMPREF0220_1155 - 29924 31030 1
CDS ptb ZP_06891911.1 HMPREF0220_1156 phosphate butyryltransferase 31048 31941 1
CDS ptb EFH07747.1 HMPREF0220_1156 - 31048 31941 1
CDS - ZP_06891912.1 HMPREF0220_1157 possible Aromatic-amino-acid transaminase 31971 33179 1
CDS - EFH07748.1 HMPREF0220_1157 - 31971 33179 1
CDS - ZP_06891913.1 HMPREF0220_1158 major facilitator family transporter 33203 34462 1
CDS - EFH07749.1 HMPREF0220_1158 - 33203 34462 1
CDS alsT ZP_06891914.1 HMPREF0220_1159 amino acid carrier protein 35092 36570 1
CDS alsT EFH07750.1 HMPREF0220_1159 - 35092 36570 1
CDS amaA ZP_06891915.1 HMPREF0220_1160 amidohydrolase 36608 37762 1
CDS amaA EFH07751.1 HMPREF0220_1160 - 36608 37762 1
CDS - ZP_06891916.1 HMPREF0220_1161 C4-dicarboxylate anaerobic carrier 37787 39205 1
CDS - EFH07752.1 HMPREF0220_1161 - 37787 39205 1
CDS - ZP_06891917.1 HMPREF0220_1162 choloylglycine hydrolase 39417 40535 1
CDS - EFH07753.1 HMPREF0220_1162 - 39417 40535 1
CDS - ZP_06891918.1 HMPREF0220_1163 transcriptional regulator 40686 41555 1
CDS - EFH07754.1 HMPREF0220_1163 - 40686 41555 1
CDS srlA ZP_06891919.1 HMPREF0220_1164 PTS family glucitol/sorbitol porter, IIC component 41930 42475 1
CDS srlA EFH07755.1 HMPREF0220_1164 - 41930 42475 1
CDS srlE ZP_06891920.1 HMPREF0220_1165 PTS family glucitol/sorbitol porter, IIB component 42488 43501 1
CDS srlE EFH07756.1 HMPREF0220_1165 - 42488 43501 1
CDS - ZP_06891921.1 HMPREF0220_1166 probable transcription antiterminator 43723 45696 1
CDS - EFH07757.1 HMPREF0220_1166 - 43723 45696 1
CDS - ZP_06891922.1 HMPREF0220_1167 glucitol operon activator protein 45766 46125 1
CDS - EFH07758.1 HMPREF0220_1167 - 45766 46125 1
CDS - ZP_06891923.1 HMPREF0220_1168 PTS family porter, enzyme I 46160 46516 1
CDS - EFH07759.1 HMPREF0220_1168 - 46160 46516 1
CDS hom ZP_06891924.1 HMPREF0220_1169 homoserine dehydrogenase 46553 47845 1
CDS hom EFH07760.1 HMPREF0220_1169 - 46553 47845 1
CDS - ZP_06891925.1 HMPREF0220_1170 CBS domain protein 48281 48919 1
CDS - EFH07761.1 HMPREF0220_1170 - 48281 48919 1
CDS - ZP_06891926.1 HMPREF0220_1171 protein of hypothetical function DUF299 48926 49768 1
CDS - EFH07762.1 HMPREF0220_1171 - 48926 49768 1
CDS ppdK ZP_06891927.1 HMPREF0220_1172 pyruvate phosphate dikinase 49814 52456 1
CDS ppdK EFH07763.1 HMPREF0220_1172 - 49814 52456 1