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Clostridium difficile NAP08 contig00034, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06892042.1 HMPREF0220_1287 conserved hypothetical protein 92 409 -1
CDS - EFH07678.1 HMPREF0220_1287 - 92 409 -1
CDS - ZP_06892043.1 HMPREF0220_1288 conserved hypothetical protein 787 987 -1
CDS - EFH07679.1 HMPREF0220_1288 - 787 987 -1
CDS - ZP_06892044.1 HMPREF0220_1289 conserved hypothetical protein 1006 1419 -1
CDS - EFH07680.1 HMPREF0220_1289 - 1006 1419 -1
CDS - ZP_06892045.1 HMPREF0220_1290 possible transcriptional regulator 1403 1636 -1
CDS - EFH07681.1 HMPREF0220_1290 - 1403 1636 -1
CDS - ZP_06892046.1 HMPREF0220_1291 response regulator 2501 3193 1
CDS - EFH07682.1 HMPREF0220_1291 - 2501 3193 1
CDS - ZP_06892047.1 HMPREF0220_1292 conserved hypothetical protein 3168 3374 1
CDS - EFH07683.1 HMPREF0220_1292 - 3168 3374 1
CDS - ZP_06892048.1 HMPREF0220_1293 sensory transduction protein kinase 3389 5461 1
CDS - EFH07684.1 HMPREF0220_1293 - 3389 5461 1
CDS - ZP_06892049.1 HMPREF0220_1294 branched-chain amino acid transporter 5654 5977 -1
CDS - EFH07685.1 HMPREF0220_1294 - 5654 5977 -1
CDS azlC ZP_06892050.1 HMPREF0220_1295 AzlC family protein 5970 6671 -1
CDS azlC EFH07686.1 HMPREF0220_1295 - 5970 6671 -1
CDS - ZP_06892051.1 HMPREF0220_1296 GntR family transcriptional regulator 6949 8334 -1
CDS - EFH07687.1 HMPREF0220_1296 - 6949 8334 -1
CDS - ZP_06892052.1 HMPREF0220_1297 conserved hypothetical protein 8438 9676 -1
CDS - EFH07688.1 HMPREF0220_1297 - 8438 9676 -1
CDS - ZP_06892053.1 HMPREF0220_1298 probable beta-lactamase repressor 9689 10066 -1
CDS - EFH07689.1 HMPREF0220_1298 - 9689 10066 -1
CDS - ZP_06892054.1 HMPREF0220_1299 hypothetical protein 10094 10213 1
CDS - EFH07690.1 HMPREF0220_1299 - 10094 10213 1
CDS - ZP_06892055.1 HMPREF0220_1300 conserved hypothetical protein 10560 10982 -1
CDS - EFH07691.1 HMPREF0220_1300 - 10560 10982 -1
CDS pspF2 ZP_06892056.1 HMPREF0220_1301 NtrC family transcriptional regulator 11459 14362 1
CDS pspF2 EFH07692.1 HMPREF0220_1301 - 11459 14362 1
CDS - ZP_06892057.1 HMPREF0220_1302 PTS family fructose/mannitol porter component IIA 14395 14841 1
CDS - EFH07693.1 HMPREF0220_1302 - 14395 14841 1
CDS - EFH07694.1 HMPREF0220_1303 - 14962 15264 1
CDS - ZP_06892058.1 HMPREF0220_1303 PTS family galactitol (gat) porter component IIB 14962 15264 1
CDS - ZP_06892059.1 HMPREF0220_1304 PTS family galactitol (gat) porter component IIC 15443 16849 1
CDS - EFH07695.1 HMPREF0220_1304 - 15443 16849 1
CDS gatD2 ZP_06892060.1 HMPREF0220_1305 possible galactitol-1-phosphate 5-dehydrogenase 17176 18252 1
CDS gatD2 EFH07696.1 HMPREF0220_1305 - 17176 18252 1
CDS araD ZP_06892061.1 HMPREF0220_1306 L-ribulose-5-phosphate 4-epimerase 18349 19035 1
CDS araD EFH07697.1 HMPREF0220_1306 - 18349 19035 1
CDS - ZP_06892062.1 HMPREF0220_1307 L-fuculose-phosphate aldolase 19053 19700 1
CDS - EFH07698.1 HMPREF0220_1307 - 19053 19700 1
CDS agcS ZP_06892063.1 HMPREF0220_1308 AGCS family alanine/glycine:sodium (Na+) symporter 19873 21240 -1
CDS agcS EFH07699.1 HMPREF0220_1308 - 19873 21240 -1
CDS topB2 ZP_06892064.1 HMPREF0220_1309 DNA topoisomerase TopB 21945 24065 1
CDS topB2 EFH07700.1 HMPREF0220_1309 - 21945 24065 1
CDS - ZP_06892065.1 HMPREF0220_1310 conserved hypothetical protein 24166 25419 1
CDS - EFH07701.1 HMPREF0220_1310 - 24166 25419 1
CDS ytvI ZP_06892066.1 HMPREF0220_1311 sporulation integral membrane protein YtvI 25574 26635 -1
CDS ytvI EFH07702.1 HMPREF0220_1311 - 25574 26635 -1
CDS ptp ZP_06892067.1 HMPREF0220_1312 protein-tyrosine phosphatase 26909 27649 1
CDS ptp EFH07703.1 HMPREF0220_1312 - 26909 27649 1
CDS - ZP_06892068.1 HMPREF0220_1313 probable transcriptional antiterminator 27661 29439 1
CDS - EFH07704.1 HMPREF0220_1313 - 27661 29439 1
CDS fruK ZP_06892069.1 HMPREF0220_1314 fructose-1-phosphate kinase 29606 30523 1
CDS fruK EFH07705.1 HMPREF0220_1314 - 29606 30523 1
CDS fruA ZP_06892070.1 HMPREF0220_1315 PTS family fructose porter, IIABC component 30560 32479 1
CDS fruA EFH07706.1 HMPREF0220_1315 - 30560 32479 1
CDS - ZP_06892071.1 HMPREF0220_1316 CAAX amino terminal protease family protein 32976 33983 1
CDS - EFH07707.1 HMPREF0220_1316 - 32976 33983 1
CDS - ZP_06892072.1 HMPREF0220_1317 oxidoreductase 34363 35889 1
CDS - EFH07708.1 HMPREF0220_1317 - 34363 35889 1
CDS - ZP_06892073.1 HMPREF0220_1318 ABC superfamily ATP binding cassette transporter permease subunit 35917 36474 1
CDS - EFH07709.1 HMPREF0220_1318 - 35917 36474 1
CDS - ZP_06892074.1 HMPREF0220_1319 conserved hypothetical protein 36996 38039 1
CDS - EFH07710.1 HMPREF0220_1319 - 36996 38039 1
CDS prsA ZP_06892075.1 HMPREF0220_1320 peptidyl-prolyl cis-trans isomerase 38150 39292 1
CDS prsA EFH07711.1 HMPREF0220_1320 - 38150 39292 1
CDS - ZP_06892076.1 HMPREF0220_1321 peptide/proton symporter family protein 39750 41141 1
CDS - EFH07712.1 HMPREF0220_1321 - 39750 41141 1
CDS xpnPEP1 ZP_06892077.1 HMPREF0220_1322 Xaa-Pro aminopeptidase 41394 43187 1
CDS xpnPEP1 EFH07713.1 HMPREF0220_1322 - 41394 43187 1