xBASE Logo
About | Contact | Home

Clostridium difficile NAP08 contig00038, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS yvdM ZP_06892146.1 HMPREF0220_1391 beta-phosphoglucomutase 1 657 1
CDS yvdM EFH07490.1 HMPREF0220_1391 - 1 657 1
CDS kojP ZP_06892147.1 HMPREF0220_1392 trehalose/maltose hydrolase 654 2939 1
CDS kojP EFH07491.1 HMPREF0220_1392 - 654 2939 1
CDS - ZP_06892148.1 HMPREF0220_1393 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase 3165 4058 1
CDS - EFH07492.1 HMPREF0220_1393 - 3165 4058 1
CDS - ZP_06892149.1 HMPREF0220_1394 conserved hypothetical protein 4502 4993 1
CDS - EFH07493.1 HMPREF0220_1394 - 4502 4993 1
CDS - ZP_06892150.1 HMPREF0220_1395 conserved hypothetical protein 5015 5971 1
CDS - EFH07494.1 HMPREF0220_1395 - 5015 5971 1
CDS amiD2 ZP_06892151.1 HMPREF0220_1396 N-acetylmuramoyl-L-alanine amidase 6261 6803 1
CDS amiD2 EFH07495.1 HMPREF0220_1396 - 6261 6803 1
CDS deaD ZP_06892152.1 HMPREF0220_1397 ATP-dependent RNA helicase DeaD 7132 8625 1
CDS deaD EFH07496.1 HMPREF0220_1397 - 7132 8625 1
CDS - ZP_06892153.1 HMPREF0220_1398 alpha/beta hydrolase 8864 9628 1
CDS - EFH07497.1 HMPREF0220_1398 - 8864 9628 1
CDS - ZP_06892154.1 HMPREF0220_1399 SNF2/RAD54 family helicase 9913 13101 -1
CDS - EFH07498.1 HMPREF0220_1399 - 9913 13101 -1
CDS - ZP_06892155.1 HMPREF0220_1400 probable formate dehydrogenase 13373 15550 1
CDS - EFH07499.1 HMPREF0220_1400 - 13373 15550 1
CDS - ZP_06892156.1 HMPREF0220_1401 probable iron-sulfur subunit of hydrogenase 15531 15986 1
CDS - EFH07500.1 HMPREF0220_1401 - 15531 15986 1
CDS - ZP_06892157.1 HMPREF0220_1402 amino acid ABC superfamily ATP binding cassette transporter, binding protein 16396 17199 1
CDS - EFH07501.1 HMPREF0220_1402 - 16396 17199 1
CDS - ZP_06892158.1 HMPREF0220_1403 amino acid ABC superfamily ATP binding cassette transporter, membrane protein 17192 17860 1
CDS - EFH07502.1 HMPREF0220_1403 - 17192 17860 1
CDS tcyB ZP_06892159.1 HMPREF0220_1404 L-cystine ABC superfamily ATP binding cassette transporter, membrane protein 18095 18757 1
CDS tcyB EFH07503.1 HMPREF0220_1404 - 18095 18757 1
CDS - ZP_06892160.1 HMPREF0220_1405 amino acid ABC superfamily ATP binding cassette transporter, binding protein 18817 19614 1
CDS - EFH07504.1 HMPREF0220_1405 - 18817 19614 1
CDS amaA2 ZP_06892161.1 HMPREF0220_1406 M20D family peptidase 19732 20922 1
CDS amaA2 EFH07505.1 HMPREF0220_1406 - 19732 20922 1
CDS - ZP_06892162.1 HMPREF0220_1407 ABC superfamily ATP binding cassette transporter, ABC protein 21031 21780 1
CDS - EFH07506.1 HMPREF0220_1407 - 21031 21780 1
CDS gltT ZP_06892163.1 HMPREF0220_1408 DAACS family dicarboxylate/amino acid:sodium (Na+) or proton (H+) symporter 22371 23432 1
CDS gltT EFH07507.1 HMPREF0220_1408 - 22371 23432 1
CDS gltT2 ZP_06892164.1 HMPREF0220_1409 DAACS family dicarboxylate/amino acid:sodium (Na+) or proton (H+) symporter 23490 23642 1
CDS gltT2 EFH07508.1 HMPREF0220_1409 - 23490 23642 1
CDS - ZP_06892165.1 HMPREF0220_1410 probable cNMP-binding regulatory protein 23792 24496 -1
CDS - EFH07509.1 HMPREF0220_1410 - 23792 24496 -1
CDS - ZP_06892166.1 HMPREF0220_1411 iron-sulfur cluster-binding protein 24657 25382 1
CDS - EFH07510.1 HMPREF0220_1411 - 24657 25382 1
CDS hcp ZP_06892167.1 HMPREF0220_1412 hydroxylamine reductase 25441 27033 1
CDS hcp EFH07511.1 HMPREF0220_1412 - 25441 27033 1
CDS - ZP_06892168.1 HMPREF0220_1413 patatin family phospholipase 27394 28317 1
CDS - EFH07512.1 HMPREF0220_1413 - 27394 28317 1
CDS msrAB ZP_06892169.1 HMPREF0220_1414 peptide-methionine (R)-S-oxide reductase 28441 29394 1
CDS msrAB EFH07513.1 HMPREF0220_1414 - 28441 29394 1
CDS - ZP_06892170.1 HMPREF0220_1415 conserved hypothetical protein 29529 30677 1
CDS - EFH07514.1 HMPREF0220_1415 - 29529 30677 1
CDS ldh ZP_06892171.1 HMPREF0220_1416 L-lactate dehydrogenase 30794 31762 -1
CDS ldh EFH07515.1 HMPREF0220_1416 - 30794 31762 -1
CDS - ZP_06892172.1 HMPREF0220_1417 DHHA1 domain protein 32336 33535 1
CDS - EFH07516.1 HMPREF0220_1417 - 32336 33535 1
CDS - ZP_06892173.1 HMPREF0220_1418 GNAT family acetyltransferase 33587 34087 1
CDS - EFH07517.1 HMPREF0220_1418 - 33587 34087 1
CDS - ZP_06892174.1 HMPREF0220_1419 conserved hypothetical protein 34189 34506 1
CDS - EFH07518.1 HMPREF0220_1419 - 34189 34506 1
CDS - ZP_06892175.1 HMPREF0220_1420 VanZ like family protein 34664 35623 1
CDS - EFH07519.1 HMPREF0220_1420 - 34664 35623 1
CDS - ZP_06892176.1 HMPREF0220_1421 membrane protein 35738 36523 1
CDS - EFH07520.1 HMPREF0220_1421 - 35738 36523 1
CDS gabT ZP_06892177.1 HMPREF0220_1422 possible (S)-3-amino-2-methylpropionate transaminase 36809 38134 1
CDS gabT EFH07521.1 HMPREF0220_1422 - 36809 38134 1
CDS - ZP_06892178.1 HMPREF0220_1423 conserved hypothetical protein 38208 38642 -1
CDS - EFH07522.1 HMPREF0220_1423 - 38208 38642 -1
CDS - ZP_06892179.1 HMPREF0220_1424 thiamine biosynthesis protein ThiH 38733 40109 -1
CDS - EFH07523.1 HMPREF0220_1424 - 38733 40109 -1
CDS - ZP_06892180.1 HMPREF0220_1425 biotin synthase 40110 41195 -1
CDS - EFH07524.1 HMPREF0220_1425 - 40110 41195 -1
CDS - ZP_06892181.1 HMPREF0220_1426 GTP-binding protein 41231 42439 -1
CDS - EFH07525.1 HMPREF0220_1426 - 41231 42439 -1
CDS - ZP_06892182.1 HMPREF0220_1427 conserved hypothetical protein 42454 42705 -1
CDS - EFH07526.1 HMPREF0220_1427 - 42454 42705 -1
CDS yhfE ZP_06892183.1 HMPREF0220_1428 M42 family peptidase 43086 44126 -1
CDS yhfE EFH07527.1 HMPREF0220_1428 - 43086 44126 -1
CDS - ZP_06892184.1 HMPREF0220_1429 conserved hypothetical protein 44596 45756 1
CDS - EFH07528.1 HMPREF0220_1429 - 44596 45756 1
CDS - ZP_06892185.1 HMPREF0220_1430 conserved hypothetical protein 46096 46257 1
CDS - EFH07529.1 HMPREF0220_1430 - 46096 46257 1
CDS - ZP_06892186.1 HMPREF0220_1431 endonuclease/exonuclease/phosphatase 46450 47079 1
CDS - EFH07530.1 HMPREF0220_1431 - 46450 47079 1
CDS - ZP_06892187.1 HMPREF0220_1432 VanW like protein 47319 48578 1
CDS - EFH07531.1 HMPREF0220_1432 - 47319 48578 1
CDS - ZP_06892188.1 HMPREF0220_1433 hypothetical protein 48567 48686 -1
CDS - EFH07532.1 HMPREF0220_1433 - 48567 48686 -1
CDS - ZP_06892189.1 HMPREF0220_1434 probable serine/threonine protein kinase 48747 49742 1
CDS - EFH07533.1 HMPREF0220_1434 - 48747 49742 1
CDS rtcB ZP_06892190.1 HMPREF0220_1435 release factor H-coupled RctB family protein 49988 51055 1
CDS rtcB EFH07534.1 HMPREF0220_1435 - 49988 51055 1
CDS mutS ZP_06892191.1 HMPREF0220_1436 DNA mismatch repair protein MutS2 51569 53479 1
CDS mutS EFH07535.1 HMPREF0220_1436 - 51569 53479 1
CDS - ZP_06892192.1 HMPREF0220_1437 probable sporulation protein YtaF 53542 54165 -1
CDS - EFH07536.1 HMPREF0220_1437 - 53542 54165 -1
CDS - ZP_06892193.1 HMPREF0220_1438 probable transcriptional regulator 54353 54997 1
CDS - EFH07537.1 HMPREF0220_1438 - 54353 54997 1
CDS - ZP_06892194.1 HMPREF0220_1439 ion channel superfamily protein 55202 56260 1
CDS - EFH07538.1 HMPREF0220_1439 - 55202 56260 1
CDS - ZP_06892195.1 HMPREF0220_1440 possible serine-type D-Ala-D-Ala carboxypeptidase 56355 57548 1
CDS - EFH07539.1 HMPREF0220_1440 - 56355 57548 1