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Clostridium difficile NAP08 contig00041, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06892316.1 HMPREF0220_1561 alpha/beta hydrolase 159 857 -1
CDS - EFH07249.1 HMPREF0220_1561 - 159 857 -1
CDS - ZP_06892317.1 HMPREF0220_1562 probable transcriptional regulator 1115 1672 1
CDS - EFH07250.1 HMPREF0220_1562 - 1115 1672 1
CDS - ZP_06892318.1 HMPREF0220_1563 acetyltransferase 2053 2526 -1
CDS - EFH07251.1 HMPREF0220_1563 - 2053 2526 -1
CDS - ZP_06892319.1 HMPREF0220_1564 conserved hypothetical protein 2819 3586 1
CDS - EFH07252.1 HMPREF0220_1564 - 2819 3586 1
CDS - ZP_06892320.1 HMPREF0220_1565 hypothetical protein 3875 3994 1
CDS - EFH07253.1 HMPREF0220_1565 - 3875 3994 1
CDS argC ZP_06892321.1 HMPREF0220_1566 N-acetyl-gamma-glutamyl-phosphate reductase 4264 5298 1
CDS argC EFH07254.1 HMPREF0220_1566 - 4264 5298 1
CDS argJ ZP_06892322.1 HMPREF0220_1567 glutamate N-acetyltransferase 5339 6556 1
CDS argJ EFH07255.1 HMPREF0220_1567 - 5339 6556 1
CDS argB ZP_06892323.1 HMPREF0220_1568 acetylglutamate kinase 6571 7431 1
CDS argB EFH07256.1 HMPREF0220_1568 - 6571 7431 1
CDS argD ZP_06892324.1 HMPREF0220_1569 acetylornithine transaminase 7461 8648 1
CDS argD EFH07257.1 HMPREF0220_1569 - 7461 8648 1
CDS argF ZP_06892325.1 HMPREF0220_1570 ornithine carbamoyltransferase 8758 9780 1
CDS argF EFH07258.1 HMPREF0220_1570 - 8758 9780 1
CDS - ZP_06892326.1 HMPREF0220_1571 probable lipoprotein 9907 10524 1
CDS - EFH07259.1 HMPREF0220_1571 - 9907 10524 1
CDS - ZP_06892327.1 HMPREF0220_1572 amino acid racemase 10718 11416 -1
CDS - EFH07260.1 HMPREF0220_1572 - 10718 11416 -1
CDS amaB ZP_06892328.1 HMPREF0220_1573 possible N-carbamoyl-L-amino-acid hydrolase 11578 12795 -1
CDS amaB EFH07261.1 HMPREF0220_1573 - 11578 12795 -1
CDS - ZP_06892329.1 HMPREF0220_1574 GNAT family acetyltransferase 12987 13433 -1
CDS - EFH07262.1 HMPREF0220_1574 - 12987 13433 -1
CDS - ZP_06892330.1 HMPREF0220_1575 ABC superfamily ATP binding cassette transporter, permease protein 13890 14528 -1
CDS - EFH07263.1 HMPREF0220_1575 - 13890 14528 -1
CDS - ZP_06892331.1 HMPREF0220_1576 ABC superfamily ATP binding cassette transporter, ABC protein 14528 15391 -1
CDS - EFH07264.1 HMPREF0220_1576 - 14528 15391 -1
CDS - ZP_06892332.1 HMPREF0220_1577 GntR family transcriptional regulator 15388 15762 -1
CDS - EFH07265.1 HMPREF0220_1577 - 15388 15762 -1
CDS - ZP_06892333.1 HMPREF0220_1578 firmicute plasmid replication protein 16129 16533 1
CDS - EFH07266.1 HMPREF0220_1578 - 16129 16533 1
CDS - ZP_06892334.1 HMPREF0220_1579 conserved hypothetical protein 16550 17146 1
CDS - EFH07267.1 HMPREF0220_1579 - 16550 17146 1
CDS clpB ZP_06892335.1 HMPREF0220_1580 chaperone protein ClpB 17183 19777 1
CDS clpB EFH07268.1 HMPREF0220_1580 - 17183 19777 1
CDS ydiC ZP_06892336.1 HMPREF0220_1581 efflux pump antibiotic resistance protein 19954 21381 -1
CDS ydiC EFH07269.1 HMPREF0220_1581 - 19954 21381 -1
CDS - ZP_06892337.1 HMPREF0220_1582 AraC-type DNA-binding domain protein 21523 22419 1
CDS - EFH07270.1 HMPREF0220_1582 - 21523 22419 1
CDS - ZP_06892338.1 HMPREF0220_1583 hypothetical protein 23076 23225 1
CDS - EFH07271.1 HMPREF0220_1583 - 23076 23225 1
CDS - ZP_06892339.1 HMPREF0220_1584 probable phage regulatory protein 23222 23593 -1
CDS - EFH07272.1 HMPREF0220_1584 - 23222 23593 -1
CDS - ZP_06892340.1 HMPREF0220_1585 conserved hypothetical protein 24137 24394 1
CDS - EFH07273.1 HMPREF0220_1585 - 24137 24394 1
CDS - ZP_06892341.1 HMPREF0220_1586 VanZF family protein 24504 25184 -1
CDS - EFH07274.1 HMPREF0220_1586 - 24504 25184 -1
CDS - ZP_06892342.1 HMPREF0220_1587 conserved hypothetical protein 25441 25740 1
CDS - EFH07275.1 HMPREF0220_1587 - 25441 25740 1
CDS ilvD ZP_06892343.1 HMPREF0220_1588 dihydroxy-acid dehydratase 26062 27717 1
CDS ilvD EFH07276.1 HMPREF0220_1588 - 26062 27717 1
CDS - ZP_06892344.1 HMPREF0220_1589 TetR family transcriptional regulator 28046 28684 1
CDS - EFH07277.1 HMPREF0220_1589 - 28046 28684 1
CDS - ZP_06892345.1 HMPREF0220_1590 probable hydrolase 28713 29525 1
CDS - EFH07278.1 HMPREF0220_1590 - 28713 29525 1
CDS apr ZP_06892346.1 HMPREF0220_1591 S8 family serine protease 30039 30977 1
CDS apr EFH07279.1 HMPREF0220_1591 - 30039 30977 1
CDS - ZP_06892347.1 HMPREF0220_1592 flavodoxin 31491 31919 1
CDS - EFH07280.1 HMPREF0220_1592 - 31491 31919 1
CDS mhpE ZP_06892348.1 HMPREF0220_1593 4-hydroxy-2-oxovalerate aldolase 32072 32875 -1
CDS mhpE EFH07281.1 HMPREF0220_1593 - 32072 32875 -1
CDS - ZP_06892349.1 HMPREF0220_1594 MerR family transcriptional regulator 33015 33383 1
CDS - EFH07282.1 HMPREF0220_1594 - 33015 33383 1
CDS - ZP_06892350.1 HMPREF0220_1595 iron-dependent transcriptional regulator 33683 34060 1
CDS - EFH07283.1 HMPREF0220_1595 - 33683 34060 1
CDS - ZP_06892351.1 HMPREF0220_1596 AraC family transcription regulator 34072 35727 1
CDS - EFH07284.1 HMPREF0220_1596 - 34072 35727 1
CDS - ZP_06892352.1 HMPREF0220_1597 membrane protein 35788 36540 1
CDS - EFH07285.1 HMPREF0220_1597 - 35788 36540 1
CDS - ZP_06892353.1 HMPREF0220_1598 conserved hypothetical protein 36751 36885 1
CDS - EFH07286.1 HMPREF0220_1598 - 36751 36885 1
CDS - ZP_06892354.1 HMPREF0220_1599 ArsR family transcription regulator 37503 37784 1
CDS - EFH07287.1 HMPREF0220_1599 - 37503 37784 1
CDS - ZP_06892355.1 HMPREF0220_1600 conserved hypothetical protein 37784 38425 1
CDS - EFH07288.1 HMPREF0220_1600 - 37784 38425 1
CDS - ZP_06892356.1 HMPREF0220_1601 conserved hypothetical protein 38685 38825 1
CDS - EFH07289.1 HMPREF0220_1601 - 38685 38825 1
CDS - ZP_06892357.1 HMPREF0220_1602 conserved hypothetical protein 38825 39016 1
CDS - EFH07290.1 HMPREF0220_1602 - 38825 39016 1
CDS - ZP_06892358.1 HMPREF0220_1603 conserved hypothetical protein 39548 39712 1
CDS - EFH07291.1 HMPREF0220_1603 - 39548 39712 1
CDS - ZP_06892359.1 HMPREF0220_1604 probable lipoprotein 39936 40781 -1
CDS - EFH07292.1 HMPREF0220_1604 - 39936 40781 -1
CDS - ZP_06892360.1 HMPREF0220_1605 phage integrase family prophage LambdaCh01 41326 41856 -1
CDS - EFH07293.1 HMPREF0220_1605 - 41326 41856 -1
CDS - ZP_06892361.1 HMPREF0220_1606 conserved hypothetical protein 41937 42179 -1
CDS - EFH07294.1 HMPREF0220_1606 - 41937 42179 -1
CDS - ZP_06892362.1 HMPREF0220_1607 conserved hypothetical protein 42699 42851 1
CDS - EFH07295.1 HMPREF0220_1607 - 42699 42851 1
CDS - ZP_06892363.1 HMPREF0220_1608 conserved hypothetical protein 43673 44023 1
CDS - EFH07296.1 HMPREF0220_1608 - 43673 44023 1
CDS trkH ZP_06892364.1 HMPREF0220_1609 Trk family K+ transporter, membrane protein 44200 44394 1
CDS trkH EFH07297.1 HMPREF0220_1609 - 44200 44394 1
CDS - ZP_06892365.1 HMPREF0220_1610 conserved hypothetical protein 45121 45363 -1
CDS - EFH07298.1 HMPREF0220_1610 - 45121 45363 -1