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Clostridium difficile NAP08 contig00044, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06892566.1 HMPREF0220_1811 conserved hypothetical protein 1 6369 -1
CDS - EFH07132.1 HMPREF0220_1811 - 1 6369 -1
CDS topB4 ZP_06892567.1 HMPREF0220_1812 DNA topoisomerase TopB 6435 8516 -1
CDS topB4 EFH07133.1 HMPREF0220_1812 - 6435 8516 -1
CDS munIM ZP_06892568.1 HMPREF0220_1813 site-specific DNA-methyltransferase (adenine-specific) 8509 9075 -1
CDS munIM EFH07134.1 HMPREF0220_1813 - 8509 9075 -1
CDS - ZP_06892569.1 HMPREF0220_1814 conserved hypothetical protein 9088 10365 -1
CDS - EFH07135.1 HMPREF0220_1814 - 9088 10365 -1
CDS - ZP_06892570.1 HMPREF0220_1815 conserved hypothetical protein 10406 10783 -1
CDS - EFH07136.1 HMPREF0220_1815 - 10406 10783 -1
CDS - ZP_06892571.1 HMPREF0220_1816 NlpC/P60 family protein 10764 13544 -1
CDS - EFH07137.1 HMPREF0220_1816 - 10764 13544 -1
CDS - ZP_06892572.1 HMPREF0220_1817 group II intron reverse transcriptase maturase 14047 15930 -1
CDS - EFH07138.1 HMPREF0220_1817 - 14047 15930 -1
CDS - ZP_06892573.1 HMPREF0220_1818 conjugal transfer protein 16663 18525 -1
CDS - EFH07139.1 HMPREF0220_1818 - 16663 18525 -1
CDS - ZP_06892574.1 HMPREF0220_1819 conserved hypothetical protein 18785 19372 -1
CDS - EFH07140.1 HMPREF0220_1819 - 18785 19372 -1
CDS - ZP_06892575.1 HMPREF0220_1820 conserved hypothetical protein 19275 20090 -1
CDS - EFH07141.1 HMPREF0220_1820 - 19275 20090 -1
CDS - ZP_06892576.1 HMPREF0220_1821 conserved hypothetical protein 20156 20371 -1
CDS - EFH07142.1 HMPREF0220_1821 - 20156 20371 -1
CDS - ZP_06892577.1 HMPREF0220_1822 TraG family protein 20446 21423 -1
CDS - EFH07143.1 HMPREF0220_1822 - 20446 21423 -1
CDS - ZP_06892578.1 HMPREF0220_1823 TraG family protein 21314 22372 -1
CDS - EFH07144.1 HMPREF0220_1823 - 21314 22372 -1
CDS - ZP_06892579.1 HMPREF0220_1824 conserved hypothetical protein 22369 22860 -1
CDS - EFH07145.1 HMPREF0220_1824 - 22369 22860 -1
CDS - ZP_06892580.1 HMPREF0220_1825 replicative DNA helicase 22943 23740 -1
CDS - EFH07146.1 HMPREF0220_1825 - 22943 23740 -1
CDS repA ZP_06892581.1 HMPREF0220_1826 replication-associated protein RepA 23737 24549 -1
CDS repA EFH07147.1 HMPREF0220_1826 - 23737 24549 -1
CDS - ZP_06892582.1 HMPREF0220_1827 replication initiator protein A 24563 25489 -1
CDS - EFH07148.1 HMPREF0220_1827 - 24563 25489 -1
CDS - ZP_06892583.1 HMPREF0220_1828 hypothetical protein 25479 25871 -1
CDS - EFH07149.1 HMPREF0220_1828 - 25479 25871 -1
CDS ssb ZP_06892584.1 HMPREF0220_1829 single-strand binding protein 25884 26282 -1
CDS ssb EFH07150.1 HMPREF0220_1829 - 25884 26282 -1
CDS - ZP_06892585.1 HMPREF0220_1830 conserved hypothetical protein 26297 26695 -1
CDS - EFH07151.1 HMPREF0220_1830 - 26297 26695 -1
CDS - ZP_06892586.1 HMPREF0220_1831 major facilitator superfamily transporter MFS_1 26911 27213 -1
CDS - EFH07152.1 HMPREF0220_1831 - 26911 27213 -1
CDS - ZP_06892587.1 HMPREF0220_1832 PRTRC system ParB family protein 27200 28129 -1
CDS - EFH07153.1 HMPREF0220_1832 - 27200 28129 -1
CDS soj ZP_06892588.1 HMPREF0220_1833 sporulation initiation inhibitor protein Soj 28119 28904 -1
CDS soj EFH07154.1 HMPREF0220_1833 - 28119 28904 -1
CDS - ZP_06892589.1 HMPREF0220_1834 transposase 29257 29901 -1
CDS - EFH07155.1 HMPREF0220_1834 - 29257 29901 -1
CDS - ZP_06892590.1 HMPREF0220_1835 acetyltransferase 29925 30431 -1
CDS - EFH07156.1 HMPREF0220_1835 - 29925 30431 -1
CDS - ZP_06892591.1 HMPREF0220_1836 conserved hypothetical protein 30445 31371 -1
CDS - EFH07157.1 HMPREF0220_1836 - 30445 31371 -1
CDS - ZP_06892592.1 HMPREF0220_1837 oxalate/formate antiporter 31496 32278 -1
CDS - EFH07158.1 HMPREF0220_1837 - 31496 32278 -1
CDS - ZP_06892593.1 HMPREF0220_1838 probable cAMP-binding regulatory protein 32434 33060 -1
CDS - EFH07159.1 HMPREF0220_1838 - 32434 33060 -1
CDS - ZP_06892594.1 HMPREF0220_1839 conserved hypothetical protein 33142 33351 -1
CDS - EFH07160.1 HMPREF0220_1839 - 33142 33351 -1
CDS - ZP_06892595.1 HMPREF0220_1840 YkoY family integral membrane protein 33812 34348 -1
CDS - EFH07161.1 HMPREF0220_1840 - 33812 34348 -1
CDS - ZP_06892596.1 HMPREF0220_1841 DNA-binding protein 34739 35248 -1
CDS - EFH07162.1 HMPREF0220_1841 - 34739 35248 -1
CDS - ZP_06892597.1 HMPREF0220_1842 conserved hypothetical protein 35232 35417 1
CDS - EFH07163.1 HMPREF0220_1842 - 35232 35417 1
CDS - ZP_06892598.1 HMPREF0220_1843 conserved hypothetical protein 35525 35674 -1
CDS - EFH07164.1 HMPREF0220_1843 - 35525 35674 -1
CDS - ZP_06892599.1 HMPREF0220_1844 conserved hypothetical protein 36223 36426 1
CDS - EFH07165.1 HMPREF0220_1844 - 36223 36426 1
CDS comEB ZP_06892600.1 HMPREF0220_1845 cytidine/deoxycytidylate deaminase 36646 37098 1
CDS comEB EFH07166.1 HMPREF0220_1845 - 36646 37098 1
CDS amiD3 ZP_06892601.1 HMPREF0220_1846 N-acetylmuramoyl-L-alanine amidase 37237 38025 1
CDS amiD3 EFH07167.1 HMPREF0220_1846 - 37237 38025 1
CDS - ZP_06892602.1 HMPREF0220_1847 conserved hypothetical protein 38073 38531 1
CDS - EFH07168.1 HMPREF0220_1847 - 38073 38531 1
CDS - ZP_06892603.1 HMPREF0220_1848 probable lipoprotein 38631 38981 -1
CDS - EFH07169.1 HMPREF0220_1848 - 38631 38981 -1
CDS - ZP_06892604.1 HMPREF0220_1849 conserved hypothetical protein 38983 39366 -1
CDS - EFH07170.1 HMPREF0220_1849 - 38983 39366 -1
CDS - ZP_06892605.1 HMPREF0220_1850 conserved hypothetical protein 39872 40255 -1
CDS - EFH07171.1 HMPREF0220_1850 - 39872 40255 -1
CDS - ZP_06892606.1 HMPREF0220_1851 YbaK/prolyl-tRNA synthetase associated region 40604 41095 1
CDS - EFH07172.1 HMPREF0220_1851 - 40604 41095 1
CDS - ZP_06892607.1 HMPREF0220_1852 UbiE/COQ5 family methyltransferase 41220 41957 -1
CDS - EFH07173.1 HMPREF0220_1852 - 41220 41957 -1
CDS tauA ZP_06892608.1 HMPREF0220_1853 nitrate/sulfonate/taurine/bicarbonate ABC superfamily ATP binding cassette transporter 42336 43385 1
CDS tauA EFH07174.1 HMPREF0220_1853 - 42336 43385 1
CDS - ZP_06892609.1 HMPREF0220_1854 conserved hypothetical protein 43534 43881 -1
CDS - EFH07175.1 HMPREF0220_1854 - 43534 43881 -1
CDS - ZP_06892610.1 HMPREF0220_1855 conserved repeat domain protein 44336 48502 -1
CDS - EFH07176.1 HMPREF0220_1855 - 44336 48502 -1
CDS - ZP_06892611.1 HMPREF0220_1856 conserved hypothetical protein 49382 50128 -1
CDS - EFH07177.1 HMPREF0220_1856 - 49382 50128 -1
CDS - ZP_06892612.1 HMPREF0220_1857 probable signaling protein 50145 53582 -1
CDS - EFH07178.1 HMPREF0220_1857 - 50145 53582 -1
CDS - ZP_06892613.1 HMPREF0220_1858 probable signaling protein 53615 54967 -1
CDS - EFH07179.1 HMPREF0220_1858 - 53615 54967 -1
CDS tyrA ZP_06892614.1 HMPREF0220_1859 prephenate dehydrogenase 55363 56202 -1
CDS tyrA EFH07180.1 HMPREF0220_1859 - 55363 56202 -1
CDS aroK ZP_06892615.1 HMPREF0220_1860 shikimate kinase 56223 56756 -1
CDS aroK EFH07181.1 HMPREF0220_1860 - 56223 56756 -1