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Clostridium difficile NAP08 contig00045, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06892624.1 HMPREF0220_1869 response regulator 222 920 -1
CDS - EFH07093.1 HMPREF0220_1869 - 222 920 -1
CDS kdpD ZP_06892625.1 HMPREF0220_1870 sensor histidine kinase KdpD 954 3656 -1
CDS kdpD EFH07094.1 HMPREF0220_1870 - 954 3656 -1
CDS ftsH ZP_06892626.1 HMPREF0220_1871 cell division protein FtsH 3834 5651 -1
CDS ftsH EFH07095.1 HMPREF0220_1871 - 3834 5651 -1
CDS - ZP_06892627.1 HMPREF0220_1872 MarR family transcriptional regulator 5681 6124 -1
CDS - EFH07096.1 HMPREF0220_1872 - 5681 6124 -1
CDS metA ZP_06892628.1 HMPREF0220_1873 homoserine O-succinyltransferase 6418 7308 -1
CDS metA EFH07097.1 HMPREF0220_1873 - 6418 7308 -1
CDS cysD ZP_06892629.1 HMPREF0220_1874 sulfate adenylyltransferase subunit 2 7338 8603 -1
CDS cysD EFH07098.1 HMPREF0220_1874 - 7338 8603 -1
CDS pmr1 ZP_06892630.1 HMPREF0220_1875 possible calcium-transporting ATPase 8863 11523 -1
CDS pmr1 EFH07099.1 HMPREF0220_1875 - 8863 11523 -1
CDS - ZP_06892631.1 HMPREF0220_1876 conserved hypothetical protein 11651 12394 -1
CDS - EFH07100.1 HMPREF0220_1876 - 11651 12394 -1
CDS bcp ZP_06892632.1 HMPREF0220_1877 peroxiredoxin 12410 12868 -1
CDS bcp EFH07101.1 HMPREF0220_1877 - 12410 12868 -1
CDS ade ZP_06892633.1 HMPREF0220_1878 adenine deaminase 13110 14300 -1
CDS ade EFH07102.1 HMPREF0220_1878 - 13110 14300 -1
tRNA - - HMPREF0220_t0010 tRNA-Arg 14378 14454 1
tRNA - - HMPREF0220_t0010 tRNA-Arg 14378 14454 1
CDS - ZP_06892634.1 HMPREF0220_1879 phage integrase family site-specific recombinase 14663 16108 -1
CDS - EFH07103.1 HMPREF0220_1879 - 14663 16108 -1
CDS - ZP_06892635.1 HMPREF0220_1880 conserved hypothetical protein 16127 16528 -1
CDS - EFH07104.1 HMPREF0220_1880 - 16127 16528 -1
CDS - ZP_06892636.1 HMPREF0220_1881 conserved hypothetical protein 16779 17027 -1
CDS - EFH07105.1 HMPREF0220_1881 - 16779 17027 -1
CDS - ZP_06892637.1 HMPREF0220_1882 region 4 superfamily sigma-70 17034 17450 -1
CDS - EFH07106.1 HMPREF0220_1882 - 17034 17450 -1
CDS - ZP_06892638.1 HMPREF0220_1883 conserved hypothetical protein 17898 18776 -1
CDS - EFH07107.1 HMPREF0220_1883 - 17898 18776 -1
CDS - ZP_06892639.1 HMPREF0220_1884 ermAM protein M 19173 19304 -1
CDS - EFH07108.1 HMPREF0220_1884 - 19173 19304 -1
CDS ermBP ZP_06892640.1 HMPREF0220_1885 rRNA (adenine-N(6)-)-methyltransferase 19309 20046 -1
CDS ermBP EFH07109.1 HMPREF0220_1885 - 19309 20046 -1
CDS - ZP_06892641.1 HMPREF0220_1886 conserved hypothetical protein 20093 20512 -1
CDS - EFH07110.1 HMPREF0220_1886 - 20093 20512 -1
CDS - ZP_06892642.1 HMPREF0220_1887 zeta-toxin 20564 20722 -1
CDS - EFH07111.1 HMPREF0220_1887 - 20564 20722 -1
CDS - ZP_06892643.1 HMPREF0220_1888 antidote of epsilon-zeta postsegregational killing system 20724 20996 -1
CDS - EFH07112.1 HMPREF0220_1888 - 20724 20996 -1
CDS - ZP_06892644.1 HMPREF0220_1889 omega transcriptional repressor superfamily protein 21013 21228 -1
CDS - EFH07113.1 HMPREF0220_1889 - 21013 21228 -1
CDS - ZP_06892645.1 HMPREF0220_1890 conserved hypothetical protein 21415 21774 1
CDS - EFH07114.1 HMPREF0220_1890 - 21415 21774 1
CDS - ZP_06892646.1 HMPREF0220_1891 conserved hypothetical protein 22275 22466 -1
CDS - EFH07115.1 HMPREF0220_1891 - 22275 22466 -1
CDS - ZP_06892647.1 HMPREF0220_1892 brp/Blh family beta-carotene 15,15'-monooxygenase 22479 23123 -1
CDS - EFH07116.1 HMPREF0220_1892 - 22479 23123 -1
CDS - ZP_06892648.1 HMPREF0220_1893 ABC superfamily ATP binding cassette transporter, ABC protein 23120 23983 -1
CDS - EFH07117.1 HMPREF0220_1893 - 23120 23983 -1
CDS gntR ZP_06892649.1 HMPREF0220_1894 GntR family transcriptional regulator 23984 24361 -1
CDS gntR EFH07118.1 HMPREF0220_1894 - 23984 24361 -1
CDS - ZP_06892650.1 HMPREF0220_1895 conjugative transposon protein 24482 25393 -1
CDS - EFH07119.1 HMPREF0220_1895 - 24482 25393 -1
CDS - ZP_06892651.1 HMPREF0220_1896 NLP/P60 family protein 25409 26416 -1
CDS - EFH07120.1 HMPREF0220_1896 - 25409 26416 -1
CDS - ZP_06892652.1 HMPREF0220_1897 conjugative transposon protein 26413 28608 -1
CDS - EFH07121.1 HMPREF0220_1897 - 26413 28608 -1
CDS - ZP_06892653.1 HMPREF0220_1898 conjugative transposon protein 28608 31058 -1
CDS - EFH07122.1 HMPREF0220_1898 - 28608 31058 -1
CDS - ZP_06892654.1 HMPREF0220_1899 conjugative transposon protein 31036 31398 -1
CDS - EFH07123.1 HMPREF0220_1899 - 31036 31398 -1
CDS - ZP_06892655.1 HMPREF0220_1900 antirestriction protein 31552 32055 -1
CDS - EFH07124.1 HMPREF0220_1900 - 31552 32055 -1
CDS - ZP_06892656.1 HMPREF0220_1901 antirestriction protein 32073 32576 -1
CDS - EFH07125.1 HMPREF0220_1901 - 32073 32576 -1
CDS - ZP_06892657.1 HMPREF0220_1902 conserved hypothetical protein 32495 32839 -1
CDS - EFH07126.1 HMPREF0220_1902 - 32495 32839 -1
CDS - ZP_06892658.1 HMPREF0220_1903 helix-turn-helix domain protein 32876 33652 -1
CDS - EFH07127.1 HMPREF0220_1903 - 32876 33652 -1
CDS - ZP_06892659.1 HMPREF0220_1904 conjugative transposon protein 33856 34077 -1
CDS - EFH07128.1 HMPREF0220_1904 - 33856 34077 -1
CDS - ZP_06892660.1 HMPREF0220_1905 conjugative transposon protein 34078 34212 -1
CDS - EFH07129.1 HMPREF0220_1905 - 34078 34212 -1
CDS - ZP_06892661.1 HMPREF0220_1906 cro/CI family transcriptional regulator 34225 35421 -1
CDS - EFH07130.1 HMPREF0220_1906 - 34225 35421 -1
CDS - ZP_06892662.1 HMPREF0220_1907 FtsK/SpoIIIE family protein 35605 36999 -1
CDS - EFH07131.1 HMPREF0220_1907 - 35605 36999 -1