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Clostridium difficile NAP08 contig00047, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06892691.1 HMPREF0220_1936 LysR family transcriptional regulator 1 703 -1
CDS - EFH07010.1 HMPREF0220_1936 - 1 703 -1
CDS - ZP_06892692.1 HMPREF0220_1937 possible CoA-disulfide reductase 833 2461 1
CDS - EFH07011.1 HMPREF0220_1937 - 833 2461 1
CDS - ZP_06892693.1 HMPREF0220_1938 anaerobic sulfite reductase subunit C 2464 3411 1
CDS - EFH07012.1 HMPREF0220_1938 - 2464 3411 1
CDS - ZP_06892694.1 HMPREF0220_1939 conserved hypothetical protein 3688 3951 -1
CDS - EFH07013.1 HMPREF0220_1939 - 3688 3951 -1
CDS - ZP_06892695.1 HMPREF0220_1940 conserved hypothetical protein 4050 4295 -1
CDS - EFH07014.1 HMPREF0220_1940 - 4050 4295 -1
CDS - ZP_06892696.1 HMPREF0220_1941 conserved hypothetical protein 4424 4570 -1
CDS - EFH07015.1 HMPREF0220_1941 - 4424 4570 -1
CDS - ZP_06892697.1 HMPREF0220_1942 C_GCAxxG_C_C family protein 4720 5088 -1
CDS - EFH07016.1 HMPREF0220_1942 - 4720 5088 -1
CDS tdh ZP_06892698.1 HMPREF0220_1943 L-threonine 3-dehydrogenase 5517 6473 1
CDS tdh EFH07017.1 HMPREF0220_1943 - 5517 6473 1
CDS - ZP_06892699.1 HMPREF0220_1944 conserved hypothetical protein 6692 7039 1
CDS - EFH07018.1 HMPREF0220_1944 - 6692 7039 1
CDS - ZP_06892700.1 HMPREF0220_1945 exonuclease superfamily protein 7079 8053 1
CDS - EFH07019.1 HMPREF0220_1945 - 7079 8053 1
CDS - ZP_06892701.1 HMPREF0220_1946 conserved hypothetical protein 8159 8818 1
CDS - EFH07020.1 HMPREF0220_1946 - 8159 8818 1
CDS - ZP_06892702.1 HMPREF0220_1947 conserved hypothetical protein 8821 9201 1
CDS - EFH07021.1 HMPREF0220_1947 - 8821 9201 1
CDS - ZP_06892703.1 HMPREF0220_1948 MerR family transcriptional regulator 9290 10453 -1
CDS - EFH07022.1 HMPREF0220_1948 - 9290 10453 -1
CDS - ZP_06892704.1 HMPREF0220_1949 conserved hypothetical protein 10559 11605 -1
CDS - EFH07023.1 HMPREF0220_1949 - 10559 11605 -1
CDS argG ZP_06892705.1 HMPREF0220_1950 argininosuccinate synthase 11855 13054 -1
CDS argG EFH07024.1 HMPREF0220_1950 - 11855 13054 -1
CDS truA1 ZP_06892706.1 HMPREF0220_1951 tRNA-pseudouridine synthase I 13625 14362 -1
CDS truA1 EFH07025.1 HMPREF0220_1951 - 13625 14362 -1
CDS - ZP_06892707.1 HMPREF0220_1952 two component sensor histidine kinase 14384 15817 -1
CDS - EFH07026.1 HMPREF0220_1952 - 14384 15817 -1
CDS - ZP_06892708.1 HMPREF0220_1953 response regulator 15820 16554 -1
CDS - EFH07027.1 HMPREF0220_1953 - 15820 16554 -1
CDS - ZP_06892709.1 HMPREF0220_1954 probable lipoprotein 16547 17935 -1
CDS - EFH07028.1 HMPREF0220_1954 - 16547 17935 -1
CDS - ZP_06892710.1 HMPREF0220_1955 site-specific DNA-methyltransferase (adenine-specific) 18071 19219 -1
CDS - EFH07029.1 HMPREF0220_1955 - 18071 19219 -1
CDS - ZP_06892711.1 HMPREF0220_1956 PP-loop family protein 19274 20092 -1
CDS - EFH07030.1 HMPREF0220_1956 - 19274 20092 -1
CDS - ZP_06892712.1 HMPREF0220_1957 conserved hypothetical protein 20401 21102 -1
CDS - EFH07031.1 HMPREF0220_1957 - 20401 21102 -1
CDS - ZP_06892713.1 HMPREF0220_1958 ArsC family protein 21537 21899 -1
CDS - EFH07032.1 HMPREF0220_1958 - 21537 21899 -1
CDS tcyC ZP_06892714.1 HMPREF0220_1959 L-cystine ABC superfamily ATP binding cassette transporter, ABC protein 22194 22865 -1
CDS tcyC EFH07033.1 HMPREF0220_1959 - 22194 22865 -1
CDS - ZP_06892715.1 HMPREF0220_1960 amino acid ABC superfamily ATP binding cassette transporter, membrane protein 22896 23507 -1
CDS - EFH07034.1 HMPREF0220_1960 - 22896 23507 -1
CDS - ZP_06892716.1 HMPREF0220_1961 amino acid ABC superfamily ATP binding cassette transporter, binding protein 23545 24348 -1
CDS - EFH07035.1 HMPREF0220_1961 - 23545 24348 -1
CDS - ZP_06892717.1 HMPREF0220_1962 conserved hypothetical protein 24826 26145 -1
CDS - EFH07036.1 HMPREF0220_1962 - 24826 26145 -1
CDS - ZP_06892718.1 HMPREF0220_1963 conserved hypothetical protein 26765 27214 -1
CDS - EFH07037.1 HMPREF0220_1963 - 26765 27214 -1
CDS - ZP_06892719.1 HMPREF0220_1964 C_GCAxxG_C_C family protein 27412 27789 -1
CDS - EFH07038.1 HMPREF0220_1964 - 27412 27789 -1
CDS ogt ZP_06892720.1 HMPREF0220_1965 methylated-DNA--[protein]-cysteine S-methyltransferase 27905 28399 -1
CDS ogt EFH07039.1 HMPREF0220_1965 - 27905 28399 -1
CDS - ZP_06892721.1 HMPREF0220_1966 BadF/BadG/BcrA/BcrD ATPase 28548 32801 -1
CDS - EFH07040.1 HMPREF0220_1966 - 28548 32801 -1
CDS - ZP_06892722.1 HMPREF0220_1967 membrane protein 33182 34351 -1
CDS - EFH07041.1 HMPREF0220_1967 - 33182 34351 -1
CDS gap ZP_06892723.1 HMPREF0220_1968 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) 34747 35763 -1
CDS gap EFH07042.1 HMPREF0220_1968 - 34747 35763 -1
CDS - ZP_06892724.1 HMPREF0220_1969 probable lipoprotein 36151 36615 -1
CDS - EFH07043.1 HMPREF0220_1969 - 36151 36615 -1
CDS - ZP_06892725.1 HMPREF0220_1970 nudix family hydrolase 36939 37547 -1
CDS - EFH07044.1 HMPREF0220_1970 - 36939 37547 -1
CDS - ZP_06892726.1 HMPREF0220_1971 B3/4 domain protein 37629 38330 -1
CDS - EFH07045.1 HMPREF0220_1971 - 37629 38330 -1
CDS rluB2 ZP_06892727.1 HMPREF0220_1972 ribosomal large subunit pseudouridine synthase B 38348 38467 -1
CDS rluB2 EFH07046.1 HMPREF0220_1972 - 38348 38467 -1
CDS - ZP_06892728.1 HMPREF0220_1973 phosphoesterase 38557 38823 1
CDS - EFH07047.1 HMPREF0220_1973 - 38557 38823 1
CDS - ZP_06892729.1 HMPREF0220_1974 conserved hypothetical protein 38924 39343 -1
CDS - EFH07048.1 HMPREF0220_1974 - 38924 39343 -1
CDS - ZP_06892730.1 HMPREF0220_1975 conserved hypothetical protein 39629 40096 -1
CDS - EFH07049.1 HMPREF0220_1975 - 39629 40096 -1
CDS - ZP_06892731.1 HMPREF0220_1976 ferredoxin 40460 41221 -1
CDS - EFH07050.1 HMPREF0220_1976 - 40460 41221 -1
CDS - ZP_06892732.1 HMPREF0220_1977 methyltransferase domain protein 42270 43100 -1
CDS - EFH07051.1 HMPREF0220_1977 - 42270 43100 -1
CDS - ZP_06892733.1 HMPREF0220_1978 conserved hypothetical protein 43176 43310 1
CDS - EFH07052.1 HMPREF0220_1978 - 43176 43310 1
CDS - ZP_06892734.1 HMPREF0220_1979 radical SAM-superfamily protein 43451 44353 -1
CDS - EFH07053.1 HMPREF0220_1979 - 43451 44353 -1
CDS - ZP_06892735.1 HMPREF0220_1980 conserved hypothetical protein 44403 44864 -1
CDS - EFH07054.1 HMPREF0220_1980 - 44403 44864 -1
CDS def2 ZP_06892736.1 HMPREF0220_1981 peptide deformylase 1 44925 45380 -1
CDS def2 EFH07055.1 HMPREF0220_1981 - 44925 45380 -1
CDS - ZP_06892737.1 HMPREF0220_1982 transcriptional regulator 45352 45615 -1
CDS - EFH07056.1 HMPREF0220_1982 - 45352 45615 -1
CDS - ZP_06892738.1 HMPREF0220_1983 ABC superfamily ATP binding cassette transporter, permease protein 45712 46428 -1
CDS - EFH07057.1 HMPREF0220_1983 - 45712 46428 -1
CDS - ZP_06892739.1 HMPREF0220_1984 ABC superfamily ATP binding cassette transporter, permease protein 46425 47108 -1
CDS - EFH07058.1 HMPREF0220_1984 - 46425 47108 -1
CDS - ZP_06892740.1 HMPREF0220_1985 ABC superfamily ATP binding cassette transporter, ABC protein 47105 47950 -1
CDS - EFH07059.1 HMPREF0220_1985 - 47105 47950 -1