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Clostridium difficile NAP08 contig00052, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS amiD7 ZP_06892783.1 HMPREF0220_2028 N-acetylmuramoyl-L-alanine amidase 57 1016 1
CDS amiD7 EFH06901.1 HMPREF0220_2028 - 57 1016 1
CDS - ZP_06892784.1 HMPREF0220_2029 conserved hypothetical protein 1248 3161 1
CDS - EFH06902.1 HMPREF0220_2029 - 1248 3161 1
CDS - ZP_06892785.1 HMPREF0220_2030 probable helicase 3145 5373 1
CDS - EFH06903.1 HMPREF0220_2030 - 3145 5373 1
CDS - ZP_06892786.1 HMPREF0220_2031 conserved hypothetical protein 5482 6312 1
CDS - EFH06904.1 HMPREF0220_2031 - 5482 6312 1
CDS addB ZP_06892787.1 HMPREF0220_2032 ATP-dependent nuclease subunit B 6302 9769 1
CDS addB EFH06905.1 HMPREF0220_2032 - 6302 9769 1
CDS addA ZP_06892788.1 HMPREF0220_2033 ATP-dependent nuclease subunit A 9769 13596 1
CDS addA EFH06906.1 HMPREF0220_2033 - 9769 13596 1
CDS sbcD ZP_06892789.1 HMPREF0220_2034 DNA repair exonuclease 13640 14851 1
CDS sbcD EFH06907.1 HMPREF0220_2034 - 13640 14851 1
CDS sbcC ZP_06892790.1 HMPREF0220_2035 ATPase 14838 18365 1
CDS sbcC EFH06908.1 HMPREF0220_2035 - 14838 18365 1
CDS - ZP_06892791.1 HMPREF0220_2036 HCC HlyC/CorC family transporter 18496 19749 1
CDS - EFH06909.1 HMPREF0220_2036 - 18496 19749 1
CDS ytvI2 ZP_06892792.1 HMPREF0220_2037 sporulation integral membrane protein YtvI 19897 20949 1
CDS ytvI2 EFH06910.1 HMPREF0220_2037 - 19897 20949 1
CDS pepT ZP_06892793.1 HMPREF0220_2038 tripeptide aminopeptidase 21042 22268 1
CDS pepT EFH06911.1 HMPREF0220_2038 - 21042 22268 1
CDS - ZP_06892794.1 HMPREF0220_2039 cell surface protein 22526 23527 1
CDS - EFH06912.1 HMPREF0220_2039 - 22526 23527 1
CDS - ZP_06892795.1 HMPREF0220_2040 MJ0936 family phosphodiesterase 23785 24354 -1
CDS - EFH06913.1 HMPREF0220_2040 - 23785 24354 -1
CDS ppnK2 ZP_06892796.1 HMPREF0220_2041 NAD(+) kinase 24379 25179 -1
CDS ppnK2 EFH06914.1 HMPREF0220_2041 - 24379 25179 -1
CDS - ZP_06892797.1 HMPREF0220_2042 ABC superfamily ATP binding cassette transporter 25313 26173 1
CDS - EFH06915.1 HMPREF0220_2042 - 25313 26173 1
CDS - ZP_06892798.1 HMPREF0220_2043 ABC superfamily ATP binding cassette transporter, permease protein 26170 26859 1
CDS - EFH06916.1 HMPREF0220_2043 - 26170 26859 1
CDS - ZP_06892799.1 HMPREF0220_2044 conserved hypothetical protein 26911 27453 1
CDS - EFH06917.1 HMPREF0220_2044 - 26911 27453 1
CDS - ZP_06892800.1 HMPREF0220_2045 YbaK/prolyl-tRNA synthetase domain protein 27532 27999 1
CDS - EFH06918.1 HMPREF0220_2045 - 27532 27999 1
CDS bcd2 ZP_06892801.1 HMPREF0220_2046 butyryl-CoA dehydrogenase 28707 29843 1
CDS bcd2 EFH06919.1 HMPREF0220_2046 - 28707 29843 1
CDS etfB3 ZP_06892802.1 HMPREF0220_2047 electron transfer flavoprotein beta subunit 29887 30684 1
CDS etfB3 EFH06920.1 HMPREF0220_2047 - 29887 30684 1
CDS etfA3 ZP_06892803.1 HMPREF0220_2048 electron transfer flavoprotein alpha subunit 30703 31713 1
CDS etfA3 EFH06921.1 HMPREF0220_2048 - 30703 31713 1
CDS crt2 ZP_06892804.1 HMPREF0220_2049 3-hydroxybutyryl-CoA dehydratase 31732 32529 1
CDS crt2 EFH06922.1 HMPREF0220_2049 - 31732 32529 1
CDS hbd ZP_06892805.1 HMPREF0220_2050 3-hydroxybutyryl-CoA dehydrogenase 32627 33472 1
CDS hbd EFH06923.1 HMPREF0220_2050 - 32627 33472 1
CDS thlA2 ZP_06892806.1 HMPREF0220_2051 acetyl-CoA C-acetyltransferase 33560 34735 1
CDS thlA2 EFH06924.1 HMPREF0220_2051 - 33560 34735 1
CDS - ZP_06892807.1 HMPREF0220_2052 RluA family pseudouridine synthase 34932 35834 1
CDS - EFH06925.1 HMPREF0220_2052 - 34932 35834 1
CDS - ZP_06892808.1 HMPREF0220_2053 conserved hypothetical protein 35848 36852 1
CDS - EFH06926.1 HMPREF0220_2053 - 35848 36852 1
CDS acpP ZP_06892809.1 HMPREF0220_2054 acyl carrier protein 36993 37220 -1
CDS acpP EFH06927.1 HMPREF0220_2054 - 36993 37220 -1
CDS - ZP_06892810.1 HMPREF0220_2055 conserved hypothetical protein 37392 37817 1
CDS - EFH06928.1 HMPREF0220_2055 - 37392 37817 1
CDS - ZP_06892811.1 HMPREF0220_2056 conserved hypothetical protein 37844 38071 1
CDS - EFH06929.1 HMPREF0220_2056 - 37844 38071 1
CDS - ZP_06892812.1 HMPREF0220_2057 conserved hypothetical protein 38253 38432 1
CDS - EFH06930.1 HMPREF0220_2057 - 38253 38432 1
CDS - ZP_06892813.1 HMPREF0220_2058 conserved hypothetical protein 38466 38666 1
CDS - EFH06931.1 HMPREF0220_2058 - 38466 38666 1
CDS ccpA ZP_06892814.1 HMPREF0220_2059 catabolite control protein A 38913 39935 1
CDS ccpA EFH06932.1 HMPREF0220_2059 - 38913 39935 1
CDS - ZP_06892815.1 HMPREF0220_2060 conserved hypothetical protein 40057 40497 -1
CDS - EFH06933.1 HMPREF0220_2060 - 40057 40497 -1
CDS - ZP_06892816.1 HMPREF0220_2061 conserved hypothetical protein 40685 41578 1
CDS - EFH06934.1 HMPREF0220_2061 - 40685 41578 1
CDS - ZP_06892817.1 HMPREF0220_2062 conserved hypothetical protein 42058 43290 1
CDS - EFH06935.1 HMPREF0220_2062 - 42058 43290 1
CDS - ZP_06892818.1 HMPREF0220_2063 probable polysaccharide biosynthesis/sporulation protein 43390 44712 -1
CDS - EFH06936.1 HMPREF0220_2063 - 43390 44712 -1
CDS hisK2 ZP_06892819.1 HMPREF0220_2064 histidinol-phosphatase 44762 45556 -1
CDS hisK2 EFH06937.1 HMPREF0220_2064 - 44762 45556 -1
CDS - ZP_06892820.1 HMPREF0220_2065 transcriptional regulator 45657 47111 1
CDS - EFH06938.1 HMPREF0220_2065 - 45657 47111 1
CDS - ZP_06892821.1 HMPREF0220_2066 conserved hypothetical protein 47139 47348 1
CDS - EFH06939.1 HMPREF0220_2066 - 47139 47348 1
CDS - ZP_06892822.1 HMPREF0220_2067 M18 family aminopeptidase 47368 48762 1
CDS - EFH06940.1 HMPREF0220_2067 - 47368 48762 1
CDS - ZP_06892823.1 HMPREF0220_2068 GntR family transcriptional regulator 48978 49754 1
CDS - EFH06941.1 HMPREF0220_2068 - 48978 49754 1
CDS - ZP_06892824.1 HMPREF0220_2069 PTS family porter 49779 50192 1
CDS - EFH06942.1 HMPREF0220_2069 - 49779 50192 1
CDS - ZP_06892825.1 HMPREF0220_2070 BtpA family protein 50196 50939 1
CDS - EFH06943.1 HMPREF0220_2070 - 50196 50939 1
CDS ulaB ZP_06892826.1 HMPREF0220_2071 PTS family ascorbate porter, IIB component 50939 51409 1
CDS ulaB EFH06944.1 HMPREF0220_2071 - 50939 51409 1
CDS - ZP_06892827.1 HMPREF0220_2072 PTS family mannose/fructose/sorbose porter component IIC 51420 52184 1
CDS - EFH06945.1 HMPREF0220_2072 - 51420 52184 1
CDS - ZP_06892828.1 HMPREF0220_2073 PTS family mannose/fructose/sorbose porter component IID 52168 53010 1
CDS - EFH06946.1 HMPREF0220_2073 - 52168 53010 1
CDS - ZP_06892829.1 HMPREF0220_2074 LysR family transcriptional regulator 53170 54075 -1
CDS - EFH06947.1 HMPREF0220_2074 - 53170 54075 -1
CDS - ZP_06892830.1 HMPREF0220_2075 probable lipoprotein 54438 55172 1
CDS - EFH06948.1 HMPREF0220_2075 - 54438 55172 1
CDS moeA ZP_06892831.1 HMPREF0220_2076 molybdenum cofactor biosynthesis protein MoeA 55384 56565 1
CDS moeA EFH06949.1 HMPREF0220_2076 - 55384 56565 1
CDS mobB ZP_06892832.1 HMPREF0220_2077 molybdopterin-guanine dinucleotide biosynthesis protein B 56552 57121 1
CDS mobB EFH06950.1 HMPREF0220_2077 - 56552 57121 1