xBASE Logo
About | Contact | Home

Clostridium difficile NAP08 contig00053, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
tRNA - - HMPREF0220_t0011 tRNA-Leu 35 117 -1
tRNA - - HMPREF0220_t0011 tRNA-Leu 35 117 -1
CDS polA ZP_06892855.1 HMPREF0220_2100 DNA-directed DNA polymerase I 436 3084 1
CDS polA EFH06789.1 HMPREF0220_2100 - 436 3084 1
CDS coaE ZP_06892856.1 HMPREF0220_2101 dephospho-CoA kinase 3093 3695 1
CDS coaE EFH06790.1 HMPREF0220_2101 - 3093 3695 1
CDS - ZP_06892857.1 HMPREF0220_2102 soluble lytic murein transglycosylase 3688 4242 1
CDS - EFH06791.1 HMPREF0220_2102 - 3688 4242 1
CDS - ZP_06892858.1 HMPREF0220_2103 ABC superfamily ATP binding cassette transporter, binding protein 4242 5957 1
CDS - EFH06792.1 HMPREF0220_2103 - 4242 5957 1
CDS - ZP_06892859.1 HMPREF0220_2104 MerTP family mercury (Hg2+) permease, binding protein MerP 6030 6242 1
CDS - EFH06793.1 HMPREF0220_2104 - 6030 6242 1
CDS - ZP_06892860.1 HMPREF0220_2105 conserved hypothetical protein 6443 7042 1
CDS - EFH06794.1 HMPREF0220_2105 - 6443 7042 1
CDS - ZP_06892861.1 HMPREF0220_2106 conserved hypothetical protein 7039 7188 -1
CDS - EFH06795.1 HMPREF0220_2106 - 7039 7188 -1
CDS gloA ZP_06892862.1 HMPREF0220_2107 lactoylglutathione lyase 7269 7640 1
CDS gloA EFH06796.1 HMPREF0220_2107 - 7269 7640 1
CDS - ZP_06892863.1 HMPREF0220_2108 probable cell wall hydrolase 7772 9046 1
CDS - EFH06797.1 HMPREF0220_2108 - 7772 9046 1
CDS - ZP_06892864.1 HMPREF0220_2109 conserved hypothetical protein 9157 10101 1
CDS - EFH06798.1 HMPREF0220_2109 - 9157 10101 1
CDS nqrA ZP_06892865.1 HMPREF0220_2110 Na(+)-translocating NADH-quinone reductase subunit A 10317 11654 1
CDS nqrA EFH06799.1 HMPREF0220_2110 - 10317 11654 1
CDS nqrB ZP_06892866.1 HMPREF0220_2111 Na(+)-translocating NADH-quinone reductase subunit B 11677 12654 1
CDS nqrB EFH06800.1 HMPREF0220_2111 - 11677 12654 1
CDS rnfG ZP_06892867.1 HMPREF0220_2112 electron transport complex protein RnfG 12654 13223 1
CDS rnfG EFH06801.1 HMPREF0220_2112 - 12654 13223 1
CDS nqrD ZP_06892868.1 HMPREF0220_2113 Na(+)-translocating NADH-quinone reductase subunit D 13236 13829 1
CDS nqrD EFH06802.1 HMPREF0220_2113 - 13236 13829 1
CDS nqrE ZP_06892869.1 HMPREF0220_2114 Na(+)-translocating NADH-quinone reductase subunit E 13844 14419 1
CDS nqrE EFH06803.1 HMPREF0220_2114 - 13844 14419 1
CDS rnfB ZP_06892870.1 HMPREF0220_2115 electron transport complex protein RnfB 14435 15406 1
CDS rnfB EFH06804.1 HMPREF0220_2115 - 14435 15406 1
CDS maf ZP_06892871.1 HMPREF0220_2116 septum formation protein Maf 15626 16210 1
CDS maf EFH06805.1 HMPREF0220_2116 - 15626 16210 1
CDS radC2 ZP_06892872.1 HMPREF0220_2117 DNA repair protein RadC 16207 16914 1
CDS radC2 EFH06806.1 HMPREF0220_2117 - 16207 16914 1
CDS ppx2 ZP_06892873.1 HMPREF0220_2118 exopolyphosphatase 16984 18045 1
CDS ppx2 EFH06807.1 HMPREF0220_2118 - 16984 18045 1
CDS - ZP_06892874.1 HMPREF0220_2119 probable rod shape-determining protein 18055 18948 1
CDS - EFH06808.1 HMPREF0220_2119 - 18055 18948 1
CDS mreD ZP_06892875.1 HMPREF0220_2120 rod shape-determining protein MreD 18963 19451 1
CDS mreD EFH06809.1 HMPREF0220_2120 - 18963 19451 1
CDS ftsI2 ZP_06892876.1 HMPREF0220_2121 cell division protein FtsI/penicillin-binding protein 2 19463 22441 1
CDS ftsI2 EFH06810.1 HMPREF0220_2121 - 19463 22441 1
CDS minC ZP_06892877.1 HMPREF0220_2122 septum site-determining protein MinC 22539 23222 1
CDS minC EFH06811.1 HMPREF0220_2122 - 22539 23222 1
CDS minD ZP_06892878.1 HMPREF0220_2123 septum site-determining protein MinD 23246 24043 1
CDS minD EFH06812.1 HMPREF0220_2123 - 23246 24043 1
CDS minE ZP_06892879.1 HMPREF0220_2124 cell division topological specificity factor MinE 24061 24345 1
CDS minE EFH06813.1 HMPREF0220_2124 - 24061 24345 1
CDS ftsW2 ZP_06892880.1 HMPREF0220_2125 FtsW/RodA/SpoVE family peptidoglycan biosynthesis protein 24468 25559 1
CDS ftsW2 EFH06814.1 HMPREF0220_2125 - 24468 25559 1
CDS mgsA ZP_06892881.1 HMPREF0220_2126 methylglyoxal synthase 25600 26013 1
CDS mgsA EFH06815.1 HMPREF0220_2126 - 25600 26013 1
CDS - ZP_06892882.1 HMPREF0220_2127 PadR family transcriptional regulator 26498 26827 1
CDS - EFH06816.1 HMPREF0220_2127 - 26498 26827 1
CDS - ZP_06892883.1 HMPREF0220_2128 conserved hypothetical protein 26831 27622 1
CDS - EFH06817.1 HMPREF0220_2128 - 26831 27622 1
CDS - ZP_06892884.1 HMPREF0220_2129 conserved hypothetical protein 28025 28387 1
CDS - EFH06818.1 HMPREF0220_2129 - 28025 28387 1
CDS - ZP_06892885.1 HMPREF0220_2130 conserved hypothetical protein 28428 28595 1
CDS - EFH06819.1 HMPREF0220_2130 - 28428 28595 1
CDS - ZP_06892886.1 HMPREF0220_2131 metallo-beta-lactamase 28599 29792 -1
CDS - EFH06820.1 HMPREF0220_2131 - 28599 29792 -1
CDS - ZP_06892887.1 HMPREF0220_2132 conserved hypothetical protein 29995 30114 1
CDS - EFH06821.1 HMPREF0220_2132 - 29995 30114 1
CDS - ZP_06892888.1 HMPREF0220_2133 radical SAM domain protein 30111 31955 1
CDS - EFH06822.1 HMPREF0220_2133 - 30111 31955 1
CDS - ZP_06892889.1 HMPREF0220_2134 conserved hypothetical protein 31957 32658 1
CDS - EFH06823.1 HMPREF0220_2134 - 31957 32658 1
CDS rng ZP_06892890.1 HMPREF0220_2135 ribonuclease G and E 32676 34097 1
CDS rng EFH06824.1 HMPREF0220_2135 - 32676 34097 1
CDS rplU ZP_06892891.1 HMPREF0220_2136 50S ribosomal protein L21 34198 34509 1
CDS rplU EFH06825.1 HMPREF0220_2136 - 34198 34509 1
CDS - ZP_06892892.1 HMPREF0220_2137 conserved hypothetical protein 34524 34841 1
CDS - EFH06826.1 HMPREF0220_2137 - 34524 34841 1
CDS rpmA ZP_06892893.1 HMPREF0220_2138 50S ribosomal protein L27 34855 35145 1
CDS rpmA EFH06827.1 HMPREF0220_2138 - 34855 35145 1
CDS cgtA ZP_06892894.1 HMPREF0220_2139 obg family GTPase CgtA 35247 36533 1
CDS cgtA EFH06828.1 HMPREF0220_2139 - 35247 36533 1
CDS - ZP_06892895.1 HMPREF0220_2140 RNA-binding protein 36585 36953 1
CDS - EFH06829.1 HMPREF0220_2140 - 36585 36953 1
CDS hom2 ZP_06892896.1 HMPREF0220_2141 homoserine dehydrogenase 37254 38459 1
CDS hom2 EFH06830.1 HMPREF0220_2141 - 37254 38459 1
CDS - ZP_06892897.1 HMPREF0220_2142 phage integrase family site-specific recombinase 38658 39224 -1
CDS - EFH06831.1 HMPREF0220_2142 - 38658 39224 -1
CDS - ZP_06892898.1 HMPREF0220_2143 possible sporulation integral membrane protein YlbJ 39491 40750 -1
CDS - EFH06832.1 HMPREF0220_2143 - 39491 40750 -1
CDS - ZP_06892899.1 HMPREF0220_2144 FadR family transcriptional regulator 40875 41588 1
CDS - EFH06833.1 HMPREF0220_2144 - 40875 41588 1
CDS - ZP_06892900.1 HMPREF0220_2145 conserved hypothetical protein 41706 42980 1
CDS - EFH06834.1 HMPREF0220_2145 - 41706 42980 1
CDS etfB4 ZP_06892901.1 HMPREF0220_2146 electron transfer flavoprotein beta subunit 42997 43785 1
CDS etfB4 EFH06835.1 HMPREF0220_2146 - 42997 43785 1
CDS etfA4 ZP_06892902.1 HMPREF0220_2147 electron transfer flavoprotein alpha subunit 43799 45019 1
CDS etfA4 EFH06836.1 HMPREF0220_2147 - 43799 45019 1
CDS glcD ZP_06892903.1 HMPREF0220_2148 glycolate oxidase 44982 46421 1
CDS glcD EFH06837.1 HMPREF0220_2148 - 44982 46421 1