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Clostridium difficile NAP08 contig00056, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS aspC2 ZP_06893074.1 HMPREF0220_2319 aspartate aminotransferase 4 1200 -1
CDS aspC2 EFH06609.1 HMPREF0220_2319 - 4 1200 -1
CDS galT ZP_06893075.1 HMPREF0220_2320 UTP-hexose-1-phosphate uridylyltransferase 1585 2535 1
CDS galT EFH06610.1 HMPREF0220_2320 - 1585 2535 1
CDS xthA ZP_06893076.1 HMPREF0220_2321 exodeoxyribonuclease III 2656 3408 1
CDS xthA EFH06611.1 HMPREF0220_2321 - 2656 3408 1
CDS - ZP_06893077.1 HMPREF0220_2322 exonuclease superfamily protein 3500 4276 -1
CDS - EFH06612.1 HMPREF0220_2322 - 3500 4276 -1
CDS - ZP_06893078.1 HMPREF0220_2323 glutamate-ammonia ligase 4591 6489 1
CDS - EFH06613.1 HMPREF0220_2323 - 4591 6489 1
CDS - ZP_06893079.1 HMPREF0220_2324 possible 1,2-diacylglycerol 3-glucosyltransferase 6617 7738 -1
CDS - EFH06614.1 HMPREF0220_2324 - 6617 7738 -1
CDS - ZP_06893080.1 HMPREF0220_2325 PadR family transcriptional regulator 7928 8269 1
CDS - EFH06615.1 HMPREF0220_2325 - 7928 8269 1
CDS - ZP_06893081.1 HMPREF0220_2326 conserved hypothetical protein 8256 9314 1
CDS - EFH06616.1 HMPREF0220_2326 - 8256 9314 1
CDS - ZP_06893082.1 HMPREF0220_2327 conserved hypothetical protein 9307 10377 1
CDS - EFH06617.1 HMPREF0220_2327 - 9307 10377 1
CDS - ZP_06893083.1 HMPREF0220_2328 probable lipoprotein 10479 11015 1
CDS - EFH06618.1 HMPREF0220_2328 - 10479 11015 1
CDS mutF2 ZP_06893084.1 HMPREF0220_2329 mutacin ABC superfamily ATP binding cassette transporter, ABC protein 11126 11842 1
CDS mutF2 EFH06619.1 HMPREF0220_2329 - 11126 11842 1
CDS - ZP_06893085.1 HMPREF0220_2330 lantibiotic ABC superfamily ATP binding cassette transporter, permease protein 11844 12563 1
CDS - EFH06620.1 HMPREF0220_2330 - 11844 12563 1
CDS - ZP_06893086.1 HMPREF0220_2331 bacteriocin ABC superfamily ATP binding cassette transporter, permease protein 12565 13335 1
CDS - EFH06621.1 HMPREF0220_2331 - 12565 13335 1
CDS spaK ZP_06893087.1 HMPREF0220_2332 possible histidine kinase 13451 14860 1
CDS spaK EFH06622.1 HMPREF0220_2332 - 13451 14860 1
CDS - ZP_06893088.1 HMPREF0220_2333 probable pyridoxine kinase 14936 15757 -1
CDS - EFH06623.1 HMPREF0220_2333 - 14936 15757 -1
CDS - ZP_06893089.1 HMPREF0220_2334 conserved hypothetical protein 15993 17162 1
CDS - EFH06624.1 HMPREF0220_2334 - 15993 17162 1
CDS cspA3 ZP_06893090.1 HMPREF0220_2335 cold shock protein CspA 17345 17545 1
CDS cspA3 EFH06625.1 HMPREF0220_2335 - 17345 17545 1
CDS guaB ZP_06893091.1 HMPREF0220_2336 CBS domain protein 17954 18394 1
CDS guaB EFH06626.1 HMPREF0220_2336 - 17954 18394 1
CDS - ZP_06893092.1 HMPREF0220_2337 peptidyl-prolyl cis-trans isomerase 18537 19322 -1
CDS - EFH06627.1 HMPREF0220_2337 - 18537 19322 -1
CDS - ZP_06893093.1 HMPREF0220_2338 conserved hypothetical protein 19413 19829 -1
CDS - EFH06628.1 HMPREF0220_2338 - 19413 19829 -1
CDS - ZP_06893094.1 HMPREF0220_2339 conserved hypothetical protein 19993 20499 -1
CDS - EFH06629.1 HMPREF0220_2339 - 19993 20499 -1
CDS - ZP_06893095.1 HMPREF0220_2340 XRE family transcriptional regulator 20581 20901 -1
CDS - EFH06630.1 HMPREF0220_2340 - 20581 20901 -1
CDS - ZP_06893096.1 HMPREF0220_2341 conserved hypothetical protein 21070 21267 1
CDS - EFH06631.1 HMPREF0220_2341 - 21070 21267 1
CDS - ZP_06893097.1 HMPREF0220_2342 conserved hypothetical protein 21371 21811 1
CDS - EFH06632.1 HMPREF0220_2342 - 21371 21811 1
CDS - ZP_06893098.1 HMPREF0220_2343 conserved hypothetical protein 22060 22503 1
CDS - EFH06633.1 HMPREF0220_2343 - 22060 22503 1
CDS - ZP_06893099.1 HMPREF0220_2344 phage family element PBSX protein XkdK 22508 23572 1
CDS - EFH06634.1 HMPREF0220_2344 - 22508 23572 1
CDS - ZP_06893100.1 HMPREF0220_2345 phage family element PBSX protein XkdM 23586 24014 1
CDS - EFH06635.1 HMPREF0220_2345 - 23586 24014 1
CDS - ZP_06893101.1 HMPREF0220_2346 conserved hypothetical protein 24128 24574 1
CDS - EFH06636.1 HMPREF0220_2346 - 24128 24574 1
CDS - ZP_06893102.1 HMPREF0220_2347 conserved hypothetical protein 24601 24768 1
CDS - EFH06637.1 HMPREF0220_2347 - 24601 24768 1
CDS - ZP_06893103.1 HMPREF0220_2348 conserved hypothetical protein 24768 27221 1
CDS - EFH06638.1 HMPREF0220_2348 - 24768 27221 1
CDS - ZP_06893104.1 HMPREF0220_2349 conserved hypothetical protein 27221 27643 1
CDS - EFH06639.1 HMPREF0220_2349 - 27221 27643 1
CDS - ZP_06893105.1 HMPREF0220_2350 probable phage cell wall hydrolase 27925 29454 1
CDS - EFH06640.1 HMPREF0220_2350 - 27925 29454 1
CDS - ZP_06893106.1 HMPREF0220_2351 conserved hypothetical protein 29470 29796 1
CDS - EFH06641.1 HMPREF0220_2351 - 29470 29796 1
CDS - ZP_06893107.1 HMPREF0220_2352 phage protein 29796 30224 1
CDS - EFH06642.1 HMPREF0220_2352 - 29796 30224 1
CDS - ZP_06893108.1 HMPREF0220_2353 phage family element PBSX protein XkdT 30217 31269 1
CDS - EFH06643.1 HMPREF0220_2353 - 30217 31269 1
CDS - ZP_06893109.1 HMPREF0220_2354 phage protein 31266 31964 1
CDS - EFH06644.1 HMPREF0220_2354 - 31266 31964 1
CDS - ZP_06893110.1 HMPREF0220_2355 probable phage tail fiber protein 31965 32951 1
CDS - EFH06645.1 HMPREF0220_2355 - 31965 32951 1
CDS - ZP_06893111.1 HMPREF0220_2356 conserved hypothetical protein 32973 38150 1
CDS - EFH06646.1 HMPREF0220_2356 - 32973 38150 1
CDS - ZP_06893112.1 HMPREF0220_2357 conserved hypothetical protein 38167 38520 1
CDS - EFH06647.1 HMPREF0220_2357 - 38167 38520 1
CDS - ZP_06893113.1 HMPREF0220_2358 conserved hypothetical protein 38783 39043 1
CDS - EFH06648.1 HMPREF0220_2358 - 38783 39043 1
CDS - ZP_06893114.1 HMPREF0220_2359 conserved hypothetical protein 39254 39709 -1
CDS - EFH06649.1 HMPREF0220_2359 - 39254 39709 -1
CDS - ZP_06893115.1 HMPREF0220_2360 probable phage regulatory protein 39937 40356 -1
CDS - EFH06650.1 HMPREF0220_2360 - 39937 40356 -1
CDS - ZP_06893116.1 HMPREF0220_2361 probable phage regulatory protein 40652 40861 1
CDS - EFH06651.1 HMPREF0220_2361 - 40652 40861 1
CDS - ZP_06893117.1 HMPREF0220_2362 conserved hypothetical protein 40881 41102 1
CDS - EFH06652.1 HMPREF0220_2362 - 40881 41102 1
CDS - ZP_06893118.1 HMPREF0220_2363 probable phage regulatory protein 41319 41717 -1
CDS - EFH06653.1 HMPREF0220_2363 - 41319 41717 -1
CDS - ZP_06893119.1 HMPREF0220_2364 major facilitator family transporter 42135 44639 -1
CDS - EFH06654.1 HMPREF0220_2364 - 42135 44639 -1
CDS - ZP_06893120.1 HMPREF0220_2365 TetR family transcriptional regulator 44641 45183 -1
CDS - EFH06655.1 HMPREF0220_2365 - 44641 45183 -1
CDS glpK ZP_06893121.1 HMPREF0220_2366 glycerol kinase 45421 46941 1
CDS glpK EFH06656.1 HMPREF0220_2366 - 45421 46941 1
CDS - ZP_06893122.1 HMPREF0220_2367 GntR family transcriptional regulator 47052 47681 -1
CDS - EFH06657.1 HMPREF0220_2367 - 47052 47681 -1
CDS - ZP_06893123.1 HMPREF0220_2368 LamB/YcsF family protein 48268 49059 1
CDS - EFH06658.1 HMPREF0220_2368 - 48268 49059 1