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Clostridium difficile NAP08 contig00057, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06893147.1 HMPREF0220_2392 ABC superfamily ATP binding cassette transporter, ABC protein 1 1249 -1
CDS - EFH06535.1 HMPREF0220_2392 - 1 1249 -1
CDS - ZP_06893148.1 HMPREF0220_2393 conserved hypothetical protein 1206 2012 -1
CDS - EFH06536.1 HMPREF0220_2393 - 1206 2012 -1
CDS - ZP_06893149.1 HMPREF0220_2394 transcriptional regulator 2071 3519 -1
CDS - EFH06537.1 HMPREF0220_2394 - 2071 3519 -1
CDS ddl ZP_06893150.1 HMPREF0220_2395 D-alanine--D-alanine ligase 3543 4442 -1
CDS ddl EFH06538.1 HMPREF0220_2395 - 3543 4442 -1
CDS cinA ZP_06893151.1 HMPREF0220_2396 competence/damage-inducible protein CinA 4700 5956 1
CDS cinA EFH06539.1 HMPREF0220_2396 - 4700 5956 1
CDS - ZP_06893152.1 HMPREF0220_2397 HAD-superfamily hydrolase 6014 6793 1
CDS - EFH06540.1 HMPREF0220_2397 - 6014 6793 1
CDS - ZP_06893153.1 HMPREF0220_2398 conserved hypothetical protein 6887 7471 -1
CDS - EFH06541.1 HMPREF0220_2398 - 6887 7471 -1
CDS - ZP_06893154.1 HMPREF0220_2399 sensory box sigma-54 dependent DNA-binding response regulator 7671 9113 -1
CDS - EFH06542.1 HMPREF0220_2399 - 7671 9113 -1
CDS - ZP_06893155.1 HMPREF0220_2400 conserved hypothetical protein 9431 10375 1
CDS - EFH06543.1 HMPREF0220_2400 - 9431 10375 1
CDS - ZP_06893156.1 HMPREF0220_2401 radical SAM protein 10677 11621 -1
CDS - EFH06544.1 HMPREF0220_2401 - 10677 11621 -1
CDS - ZP_06893157.1 HMPREF0220_2402 conserved hypothetical protein 11732 12325 -1
CDS - EFH06545.1 HMPREF0220_2402 - 11732 12325 -1
CDS - ZP_06893158.1 HMPREF0220_2403 conserved hypothetical protein 12437 12865 1
CDS - EFH06546.1 HMPREF0220_2403 - 12437 12865 1
CDS - ZP_06893159.1 HMPREF0220_2404 ANH superfamily adenosine nucleotide alpha hydrolase 12932 13600 1
CDS - EFH06547.1 HMPREF0220_2404 - 12932 13600 1
CDS - ZP_06893160.1 HMPREF0220_2405 MOP/MATE family multidrug-resistance efflux pump 13718 15073 -1
CDS - EFH06548.1 HMPREF0220_2405 - 13718 15073 -1
CDS - ZP_06893161.1 HMPREF0220_2406 phage integrase family prophage LambdaCh01 15264 15608 -1
CDS - EFH06549.1 HMPREF0220_2406 - 15264 15608 -1
CDS - ZP_06893162.1 HMPREF0220_2407 probable signaling protein 16075 17808 -1
CDS - EFH06550.1 HMPREF0220_2407 - 16075 17808 -1
CDS - ZP_06893163.1 HMPREF0220_2408 probable signaling protein 18048 18893 -1
CDS - EFH06551.1 HMPREF0220_2408 - 18048 18893 -1
CDS - ZP_06893164.1 HMPREF0220_2409 probable signaling protein 18924 21158 -1
CDS - EFH06552.1 HMPREF0220_2409 - 18924 21158 -1
CDS - ZP_06893165.1 HMPREF0220_2410 MerR family transcriptional regulator 21934 22743 1
CDS - EFH06553.1 HMPREF0220_2410 - 21934 22743 1
CDS - ZP_06893166.1 HMPREF0220_2411 conserved hypothetical protein 22852 23061 -1
CDS - EFH06554.1 HMPREF0220_2411 - 22852 23061 -1
CDS - ZP_06893167.1 HMPREF0220_2412 Mg2+ transporter-C family protein 23547 24221 -1
CDS - EFH06555.1 HMPREF0220_2412 - 23547 24221 -1
CDS - ZP_06893168.1 HMPREF0220_2413 conserved hypothetical protein 24624 24758 1
CDS - EFH06556.1 HMPREF0220_2413 - 24624 24758 1
CDS - ZP_06893169.1 HMPREF0220_2414 conserved hypothetical protein 24858 25643 1
CDS - EFH06557.1 HMPREF0220_2414 - 24858 25643 1
CDS pdaA ZP_06893170.1 HMPREF0220_2415 delta-lactam-biosynthetic de-N-acetylase 25739 26563 -1
CDS pdaA EFH06558.1 HMPREF0220_2415 - 25739 26563 -1
CDS - ZP_06893171.1 HMPREF0220_2416 exonuclease superfamily protein 26786 29905 1
CDS - EFH06559.1 HMPREF0220_2416 - 26786 29905 1
CDS - ZP_06893172.1 HMPREF0220_2417 probable ribonuclease 29922 30521 1
CDS - EFH06560.1 HMPREF0220_2417 - 29922 30521 1
CDS ahpC ZP_06893173.1 HMPREF0220_2418 peroxiredoxin 30734 32863 -1
CDS ahpC EFH06561.1 HMPREF0220_2418 - 30734 32863 -1
CDS - ZP_06893174.1 HMPREF0220_2419 conserved hypothetical protein 33129 33377 1
CDS - EFH06562.1 HMPREF0220_2419 - 33129 33377 1
CDS ubiD ZP_06893175.1 HMPREF0220_2420 UbiD family decarboxylase 33543 34934 1
CDS ubiD EFH06563.1 HMPREF0220_2420 - 33543 34934 1
CDS - ZP_06893176.1 HMPREF0220_2421 VanW like protein 35049 36503 1
CDS - EFH06564.1 HMPREF0220_2421 - 35049 36503 1
CDS - ZP_06893177.1 HMPREF0220_2422 probable sigma-54-dependent transcriptional regulator 36568 37161 1
CDS - EFH06565.1 HMPREF0220_2422 - 36568 37161 1
CDS - ZP_06893178.1 HMPREF0220_2423 probable multiprotein complex assembly protein 37292 38689 1
CDS - EFH06566.1 HMPREF0220_2423 - 37292 38689 1
CDS lrgA ZP_06893179.1 HMPREF0220_2424 murein hydrolase regulator LrgA 38871 39242 1
CDS lrgA EFH06567.1 HMPREF0220_2424 - 38871 39242 1
CDS lrgB ZP_06893180.1 HMPREF0220_2425 murein hydrolase export regulator LrgB 39235 39924 1
CDS lrgB EFH06568.1 HMPREF0220_2425 - 39235 39924 1
CDS - ZP_06893181.1 HMPREF0220_2426 conserved hypothetical protein 40444 41310 1
CDS - EFH06569.1 HMPREF0220_2426 - 40444 41310 1
CDS - ZP_06893182.1 HMPREF0220_2427 MORN repeat protrin 41552 42361 1
CDS - EFH06570.1 HMPREF0220_2427 - 41552 42361 1
CDS - ZP_06893183.1 HMPREF0220_2428 conserved hypothetical protein 42502 43566 1
CDS - EFH06571.1 HMPREF0220_2428 - 42502 43566 1
CDS - ZP_06893184.1 HMPREF0220_2429 oligosaccharide deacetylase 43594 44313 1
CDS - EFH06572.1 HMPREF0220_2429 - 43594 44313 1
CDS pabA ZP_06893185.1 HMPREF0220_2430 anthranilate synthase 44336 44920 1
CDS pabA EFH06573.1 HMPREF0220_2430 - 44336 44920 1
CDS pabB ZP_06893186.1 HMPREF0220_2431 aminodeoxychorismate synthase 44922 46271 1
CDS pabB EFH06574.1 HMPREF0220_2431 - 44922 46271 1
CDS ilvE ZP_06893187.1 HMPREF0220_2432 possible branched-chain-amino-acid transaminase 46261 47004 1
CDS ilvE EFH06575.1 HMPREF0220_2432 - 46261 47004 1
CDS - ZP_06893188.1 HMPREF0220_2433 conserved hypothetical protein 47038 47739 1
CDS - EFH06576.1 HMPREF0220_2433 - 47038 47739 1
CDS folE ZP_06893189.1 HMPREF0220_2434 GTP cyclohydrolase I 47765 48337 1
CDS folE EFH06577.1 HMPREF0220_2434 - 47765 48337 1
CDS folP ZP_06893190.1 HMPREF0220_2435 dihydropteroate synthase 48403 49194 1
CDS folP EFH06578.1 HMPREF0220_2435 - 48403 49194 1
CDS folB ZP_06893191.1 HMPREF0220_2436 dihydroneopterin aldolase 49175 49570 1
CDS folB EFH06579.1 HMPREF0220_2436 - 49175 49570 1
CDS folK ZP_06893192.1 HMPREF0220_2437 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase 49563 50069 1
CDS folK EFH06580.1 HMPREF0220_2437 - 49563 50069 1
CDS aroF2 ZP_06893193.1 HMPREF0220_2438 phospho-2-dehydro-3-deoxyheptonate aldolase 50050 50835 1
CDS aroF2 EFH06581.1 HMPREF0220_2438 - 50050 50835 1
CDS - ZP_06893194.1 HMPREF0220_2439 DNA primase 51054 52880 1
CDS - EFH06582.1 HMPREF0220_2439 - 51054 52880 1
CDS rpoD ZP_06893195.1 HMPREF0220_2440 DNA-directed RNA polymerase sigma subunit RpoD 52898 54064 1
CDS rpoD EFH06583.1 HMPREF0220_2440 - 52898 54064 1
CDS - ZP_06893196.1 HMPREF0220_2441 possible S-adenosyl-L-methionine-dependent methyltransferase 54226 54915 1
CDS - EFH06584.1 HMPREF0220_2441 - 54226 54915 1