xBASE Logo
About | Contact | Home

Clostridium difficile NAP08 contig00059, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS sigA ZP_06893237.1 HMPREF0220_2482 RNA polymerase sigma factor rpoD 239 1144 1
CDS sigA EFH06427.1 HMPREF0220_2482 - 239 1144 1
CDS - ZP_06893238.1 HMPREF0220_2483 Fur family transcriptional regulator 1619 2050 -1
CDS - EFH06428.1 HMPREF0220_2483 - 1619 2050 -1
CDS adcA ZP_06893239.1 HMPREF0220_2484 zinc ABC superfamily ATP binding cassette transporter, binding protein 2185 3087 1
CDS adcA EFH06429.1 HMPREF0220_2484 - 2185 3087 1
CDS - ZP_06893240.1 HMPREF0220_2485 ABC superfamily ATP binding cassette transporter, ABC protein 3090 3734 1
CDS - EFH06430.1 HMPREF0220_2485 - 3090 3734 1
CDS - ZP_06893241.1 HMPREF0220_2486 ABC superfamily ATP binding cassette transporter, membrane protein 3727 4515 1
CDS - EFH06431.1 HMPREF0220_2486 - 3727 4515 1
CDS - ZP_06893242.1 HMPREF0220_2487 CobW/P47K family protein 4571 5500 1
CDS - EFH06432.1 HMPREF0220_2487 - 4571 5500 1
CDS - ZP_06893243.1 HMPREF0220_2488 G3E family GTPase family protein 5501 7057 1
CDS - EFH06433.1 HMPREF0220_2488 - 5501 7057 1
CDS - ZP_06893244.1 HMPREF0220_2489 conserved hypothetical protein 7198 7962 1
CDS - EFH06434.1 HMPREF0220_2489 - 7198 7962 1
CDS mviN2 ZP_06893245.1 HMPREF0220_2490 integral membrane protein MviN 8257 9801 1
CDS mviN2 EFH06435.1 HMPREF0220_2490 - 8257 9801 1
CDS deoC ZP_06893246.1 HMPREF0220_2491 deoxyribose-phosphate aldolase 9828 10487 1
CDS deoC EFH06436.1 HMPREF0220_2491 - 9828 10487 1
CDS gntR2 ZP_06893247.1 HMPREF0220_2492 GntR family transcriptional regulator 10953 11321 1
CDS gntR2 EFH06437.1 HMPREF0220_2492 - 10953 11321 1
CDS - ZP_06893248.1 HMPREF0220_2493 ABC superfamily ATP binding cassette transporter, ABC protein 11325 12200 1
CDS - EFH06438.1 HMPREF0220_2493 - 11325 12200 1
CDS - ZP_06893249.1 HMPREF0220_2494 ABC superfamily ATP binding cassette transporter, permease protein 12201 12995 1
CDS - EFH06439.1 HMPREF0220_2494 - 12201 12995 1
CDS - ZP_06893250.1 HMPREF0220_2495 MOP/MATE family multidrug-resistance efflux pump 13090 14415 -1
CDS - EFH06440.1 HMPREF0220_2495 - 13090 14415 -1
CDS - ZP_06893251.1 HMPREF0220_2496 possible thioredoxin 14838 15278 1
CDS - EFH06441.1 HMPREF0220_2496 - 14838 15278 1
CDS - ZP_06893252.1 HMPREF0220_2497 conserved hypothetical protein 15419 15568 1
CDS - EFH06442.1 HMPREF0220_2497 - 15419 15568 1
CDS - ZP_06893253.1 HMPREF0220_2498 iron-sulfur cluster-binding protein 15561 16478 1
CDS - EFH06443.1 HMPREF0220_2498 - 15561 16478 1
CDS - ZP_06893254.1 HMPREF0220_2499 conserved hypothetical protein 16483 17052 1
CDS - EFH06444.1 HMPREF0220_2499 - 16483 17052 1
CDS - ZP_06893255.1 HMPREF0220_2500 protein of hypothetical function DUF1121 17194 17841 -1
CDS - EFH06445.1 HMPREF0220_2500 - 17194 17841 -1
CDS - ZP_06893256.1 HMPREF0220_2501 conserved hypothetical protein 18224 19138 -1
CDS - EFH06446.1 HMPREF0220_2501 - 18224 19138 -1
CDS - ZP_06893257.1 HMPREF0220_2502 conserved hypothetical protein 19443 19625 -1
CDS - EFH06447.1 HMPREF0220_2502 - 19443 19625 -1
CDS panC ZP_06893258.1 HMPREF0220_2503 pantoate--beta-alanine ligase 19988 20836 -1
CDS panC EFH06448.1 HMPREF0220_2503 - 19988 20836 -1
CDS panB ZP_06893259.1 HMPREF0220_2504 3-methyl-2-oxobutanoate hydroxymethyltransferase 20855 21685 -1
CDS panB EFH06449.1 HMPREF0220_2504 - 20855 21685 -1
CDS - ZP_06893260.1 HMPREF0220_2505 conserved hypothetical protein 21657 22538 -1
CDS - EFH06450.1 HMPREF0220_2505 - 21657 22538 -1
CDS - ZP_06893261.1 HMPREF0220_2506 probable signaling protein 23231 25324 1
CDS - EFH06451.1 HMPREF0220_2506 - 23231 25324 1
CDS - ZP_06893262.1 HMPREF0220_2507 MerR family transcriptional activator 25778 26596 1
CDS - EFH06452.1 HMPREF0220_2507 - 25778 26596 1
CDS feoB3 ZP_06893263.1 HMPREF0220_2508 FeoB family ferrous iron (Fe2+) uptake protein 26709 28829 -1
CDS feoB3 EFH06453.1 HMPREF0220_2508 - 26709 28829 -1
CDS feoA2 ZP_06893264.1 HMPREF0220_2509 probable ferrous ion transport protein 28855 29082 -1
CDS feoA2 EFH06454.1 HMPREF0220_2509 - 28855 29082 -1
CDS - ZP_06893265.1 HMPREF0220_2510 acetyltransferase 29409 29849 -1
CDS - EFH06455.1 HMPREF0220_2510 - 29409 29849 -1
CDS - ZP_06893266.1 HMPREF0220_2511 conserved hypothetical protein 30001 30990 1
CDS - EFH06456.1 HMPREF0220_2511 - 30001 30990 1
CDS tyrS ZP_06893267.1 HMPREF0220_2512 tyrosine--tRNA ligase 31466 32674 1
CDS tyrS EFH06457.1 HMPREF0220_2512 - 31466 32674 1
CDS - ZP_06893268.1 HMPREF0220_2513 polysaccharide deacetylase 32735 33616 -1
CDS - EFH06458.1 HMPREF0220_2513 - 32735 33616 -1
CDS - ZP_06893269.1 HMPREF0220_2514 DMT superfamily drug/metabolite transporter 34002 34946 1
CDS - EFH06459.1 HMPREF0220_2514 - 34002 34946 1
CDS - ZP_06893270.1 HMPREF0220_2515 rubredoxin/rubrerythrin 35169 35714 1
CDS - EFH06460.1 HMPREF0220_2515 - 35169 35714 1
CDS - ZP_06893271.1 HMPREF0220_2516 probable iron-sulfur protein 35805 36953 1
CDS - EFH06461.1 HMPREF0220_2516 - 35805 36953 1
CDS pyrC ZP_06893272.1 HMPREF0220_2517 dihydroorotase 37006 38271 1
CDS pyrC EFH06462.1 HMPREF0220_2517 - 37006 38271 1
CDS - ZP_06893273.1 HMPREF0220_2518 ABC superfamily ATP binding cassette transporter, permease protein 38556 39788 -1
CDS - EFH06463.1 HMPREF0220_2518 - 38556 39788 -1
CDS macB ZP_06893274.1 HMPREF0220_2519 macrolide export ABC superfamily ATP binding cassette transporter, ABC protein 39791 40465 -1
CDS macB EFH06464.1 HMPREF0220_2519 - 39791 40465 -1
CDS - ZP_06893275.1 HMPREF0220_2520 ABC superfamily ATP binding cassette transporter, permease protein 40473 41705 -1
CDS - EFH06465.1 HMPREF0220_2520 - 40473 41705 -1
CDS - ZP_06893276.1 HMPREF0220_2521 two component sensor histidine kinase 41816 42820 -1
CDS - EFH06466.1 HMPREF0220_2521 - 41816 42820 -1
CDS - ZP_06893277.1 HMPREF0220_2522 response regulator 42844 43518 -1
CDS - EFH06467.1 HMPREF0220_2522 - 42844 43518 -1
CDS - ZP_06893278.1 HMPREF0220_2523 ABC superfamily ATP binding cassette transporter, ABC protein 43806 44573 1
CDS - EFH06468.1 HMPREF0220_2523 - 43806 44573 1
CDS - ZP_06893279.1 HMPREF0220_2524 ABC superfamily ATP binding cassette transporter, permease protein 44560 46497 1
CDS - EFH06469.1 HMPREF0220_2524 - 44560 46497 1
CDS ggt ZP_06893280.1 HMPREF0220_2525 possible gamma-glutamyltransferase 46729 48342 1
CDS ggt EFH06470.1 HMPREF0220_2525 - 46729 48342 1
CDS sseA ZP_06893281.1 HMPREF0220_2526 possible 3-mercaptopyruvate sulfurtransferase 48470 49321 -1
CDS sseA EFH06471.1 HMPREF0220_2526 - 48470 49321 -1
CDS hydG ZP_06893282.1 HMPREF0220_2527 oxidoreductase 49932 50840 1
CDS hydG EFH06472.1 HMPREF0220_2527 - 49932 50840 1
CDS aspB ZP_06893283.1 HMPREF0220_2528 possible glutamate synthase (NADPH) 50840 52234 1
CDS aspB EFH06473.1 HMPREF0220_2528 - 50840 52234 1
CDS - ZP_06893284.1 HMPREF0220_2529 probable signaling protein 52599 54818 1
CDS - EFH06474.1 HMPREF0220_2529 - 52599 54818 1
CDS - ZP_06893285.1 HMPREF0220_2530 ABC superfamily ATP binding cassette transporter, ABC protein 54902 55717 1
CDS - EFH06475.1 HMPREF0220_2530 - 54902 55717 1
CDS - ZP_06893286.1 HMPREF0220_2531 ABC superfamily ATP binding cassette transporter, permease protein 55717 57597 1
CDS - EFH06476.1 HMPREF0220_2531 - 55717 57597 1