xBASE Logo
About | Contact | Home

Clostridium difficile NAP08 contig00060, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06893329.1 HMPREF0220_2574 resolvase family site-specific recombinase 1 1554 1
CDS - EFH06374.1 HMPREF0220_2574 - 1 1554 1
CDS - ZP_06893330.1 HMPREF0220_2575 probable transcriptional regulator 1625 2692 1
CDS - EFH06375.1 HMPREF0220_2575 - 1625 2692 1
CDS - ZP_06893331.1 HMPREF0220_2576 conserved hypothetical protein 2744 2866 1
CDS - EFH06376.1 HMPREF0220_2576 - 2744 2866 1
CDS - ZP_06893332.1 HMPREF0220_2577 GNAT family acetyltransferase 3003 3524 -1
CDS - EFH06377.1 HMPREF0220_2577 - 3003 3524 -1
CDS - ZP_06893333.1 HMPREF0220_2578 3D/G5 domain protein 3886 4683 1
CDS - EFH06378.1 HMPREF0220_2578 - 3886 4683 1
CDS - ZP_06893334.1 HMPREF0220_2579 probable arylesterase 4793 5383 1
CDS - EFH06379.1 HMPREF0220_2579 - 4793 5383 1
CDS pgcA2 ZP_06893335.1 HMPREF0220_2580 phosphoglucomutase 5448 7145 1
CDS pgcA2 EFH06380.1 HMPREF0220_2580 - 5448 7145 1
CDS - ZP_06893336.1 HMPREF0220_2581 probable membrane-associated ribonuclease 7346 8185 1
CDS - EFH06381.1 HMPREF0220_2581 - 7346 8185 1
CDS - ZP_06893337.1 HMPREF0220_2582 probable two component histidine kinase 8704 10560 1
CDS - EFH06382.1 HMPREF0220_2582 - 8704 10560 1
CDS hom3 ZP_06893338.1 HMPREF0220_2583 homoserine dehydrogenase 11269 12486 1
CDS hom3 EFH06383.1 HMPREF0220_2583 - 11269 12486 1
CDS - ZP_06893339.1 HMPREF0220_2584 conserved hypothetical protein 12602 13096 1
CDS - EFH06384.1 HMPREF0220_2584 - 12602 13096 1
CDS hisD1 ZP_06893340.1 HMPREF0220_2585 histidinol dehydrogenase 13335 14600 1
CDS hisD1 EFH06385.1 HMPREF0220_2585 - 13335 14600 1
CDS - ZP_06893341.1 HMPREF0220_2586 alpha/beta hydrolase 14805 15557 -1
CDS - EFH06386.1 HMPREF0220_2586 - 14805 15557 -1
CDS - ZP_06893342.1 HMPREF0220_2587 conserved hypothetical protein 15756 15944 -1
CDS - EFH06387.1 HMPREF0220_2587 - 15756 15944 -1
CDS - ZP_06893343.1 HMPREF0220_2588 probable sugar metabolism repressor 16419 16775 1
CDS - EFH06388.1 HMPREF0220_2588 - 16419 16775 1
CDS - ZP_06893344.1 HMPREF0220_2589 probable sugar metabolism repressor 17041 17244 1
CDS - EFH06389.1 HMPREF0220_2589 - 17041 17244 1
CDS - ZP_06893345.1 HMPREF0220_2590 probable N-acetylglucosamine kinase 17244 17399 1
CDS - EFH06390.1 HMPREF0220_2590 - 17244 17399 1
CDS - ZP_06893346.1 HMPREF0220_2591 membrane protein 17799 18431 1
CDS - EFH06391.1 HMPREF0220_2591 - 17799 18431 1
CDS kdpA ZP_06893347.1 HMPREF0220_2592 potassium-transporting ATPase subunit A 18981 20657 1
CDS kdpA EFH06392.1 HMPREF0220_2592 - 18981 20657 1
CDS kdpB ZP_06893348.1 HMPREF0220_2593 potassium-transporting ATPase subunit B 20682 22739 1
CDS kdpB EFH06393.1 HMPREF0220_2593 - 20682 22739 1
CDS kdpC ZP_06893349.1 HMPREF0220_2594 potassium-transporting ATPase subunit C 22743 23384 1
CDS kdpC EFH06394.1 HMPREF0220_2594 - 22743 23384 1
CDS srpG ZP_06893350.1 HMPREF0220_2595 cysteine synthase 23621 24529 1
CDS srpG EFH06395.1 HMPREF0220_2595 - 23621 24529 1
CDS cysE ZP_06893351.1 HMPREF0220_2596 serine acetyltransferase 24547 25146 1
CDS cysE EFH06396.1 HMPREF0220_2596 - 24547 25146 1
CDS fer ZP_06893352.1 HMPREF0220_2597 ferredoxin 25307 25495 1
CDS fer EFH06397.1 HMPREF0220_2597 - 25307 25495 1
CDS map ZP_06893353.1 HMPREF0220_2598 methionyl aminopeptidase 25549 26418 -1
CDS map EFH06398.1 HMPREF0220_2598 - 25549 26418 -1
CDS - ZP_06893354.1 HMPREF0220_2599 conserved hypothetical protein 26615 27865 -1
CDS - EFH06399.1 HMPREF0220_2599 - 26615 27865 -1
CDS - ZP_06893355.1 HMPREF0220_2600 endo/exonuclease amino terminal GIY-YIG domain protein 28152 28454 1
CDS - EFH06400.1 HMPREF0220_2600 - 28152 28454 1
CDS thiD ZP_06893356.1 HMPREF0220_2601 probable phosphomethylpyrimidine kinase 28748 29542 1
CDS thiD EFH06401.1 HMPREF0220_2601 - 28748 29542 1
CDS thiM ZP_06893357.1 HMPREF0220_2602 hydroxyethylthiazole kinase 29566 30351 1
CDS thiM EFH06402.1 HMPREF0220_2602 - 29566 30351 1
CDS thiE ZP_06893358.1 HMPREF0220_2603 thiamine-phosphate diphosphorylase 30374 31006 1
CDS thiE EFH06403.1 HMPREF0220_2603 - 30374 31006 1
CDS licB2 ZP_06893359.1 HMPREF0220_2604 PTS family lichenan porter component IIB 31145 31447 1
CDS licB2 EFH06404.1 HMPREF0220_2604 - 31145 31447 1
CDS - ZP_06893360.1 HMPREF0220_2605 ABC superfamily ATP binding cassette transporter superfamily protein 31513 32268 -1
CDS - EFH06405.1 HMPREF0220_2605 - 31513 32268 -1
CDS - ZP_06893361.1 HMPREF0220_2606 ABC superfamily ATP binding cassette transporter, ABC protein 32256 33218 -1
CDS - EFH06406.1 HMPREF0220_2606 - 32256 33218 -1
CDS - ZP_06893362.1 HMPREF0220_2607 conserved hypothetical protein 33222 33674 -1
CDS - EFH06407.1 HMPREF0220_2607 - 33222 33674 -1
CDS - ZP_06893363.1 HMPREF0220_2608 GntR family transcriptional regulator 34035 34391 1
CDS - EFH06408.1 HMPREF0220_2608 - 34035 34391 1
CDS - ZP_06893364.1 HMPREF0220_2609 ABC superfamily ATP binding cassette transporter domain protein 34445 35179 1
CDS - EFH06409.1 HMPREF0220_2609 - 34445 35179 1
CDS - ZP_06893365.1 HMPREF0220_2610 ABC superfamily ATP binding cassette transporter, permease protein 35172 35996 1
CDS - EFH06410.1 HMPREF0220_2610 - 35172 35996 1
CDS - ZP_06893366.1 HMPREF0220_2611 conserved hypothetical protein 36007 37206 1
CDS - EFH06411.1 HMPREF0220_2611 - 36007 37206 1
CDS - ZP_06893367.1 HMPREF0220_2612 conserved hypothetical protein 37215 38027 1
CDS - EFH06412.1 HMPREF0220_2612 - 37215 38027 1
CDS - ZP_06893368.1 HMPREF0220_2613 conserved hypothetical protein 38038 39306 1
CDS - EFH06413.1 HMPREF0220_2613 - 38038 39306 1
CDS - ZP_06893369.1 HMPREF0220_2614 aryldialkylphosphatase 39663 40844 1
CDS - EFH06414.1 HMPREF0220_2614 - 39663 40844 1
CDS - ZP_06893370.1 HMPREF0220_2615 conserved hypothetical protein 40986 41903 -1
CDS - EFH06415.1 HMPREF0220_2615 - 40986 41903 -1
CDS ccmA ZP_06893371.1 HMPREF0220_2616 ATPase 42156 42452 1
CDS ccmA EFH06416.1 HMPREF0220_2616 - 42156 42452 1
CDS natA ZP_06893372.1 HMPREF0220_2617 sodium extrusion ABC superfamily ATP binding cassette transporter, ABC protein 42533 42949 1
CDS natA EFH06417.1 HMPREF0220_2617 - 42533 42949 1
CDS - ZP_06893373.1 HMPREF0220_2618 sodium extrusion ABC superfamily ATP binding cassette transporter, permease protein 42950 45010 1
CDS - EFH06418.1 HMPREF0220_2618 - 42950 45010 1
CDS - ZP_06893374.1 HMPREF0220_2619 probable signaling protein 45749 47161 1
CDS - EFH06419.1 HMPREF0220_2619 - 45749 47161 1
CDS - ZP_06893375.1 HMPREF0220_2620 GntR family transcriptional regulator 47337 47705 1
CDS - EFH06420.1 HMPREF0220_2620 - 47337 47705 1
CDS - ZP_06893376.1 HMPREF0220_2621 ABC superfamily ATP binding cassette transporter, ABC protein 47707 48432 1
CDS - EFH06421.1 HMPREF0220_2621 - 47707 48432 1
CDS - ZP_06893377.1 HMPREF0220_2622 ABC superfamily ATP binding cassette transporter permease subunit 48426 49190 1
CDS - EFH06422.1 HMPREF0220_2622 - 48426 49190 1
CDS - ZP_06893378.1 HMPREF0220_2623 major facilitator family transporter 49436 50686 1
CDS - EFH06423.1 HMPREF0220_2623 - 49436 50686 1