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Clostridium difficile NAP08 contig00102, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS lon ZP_06893618.1 HMPREF0220_2865 endopeptidase La 3 2012 1
CDS lon EFH06095.1 HMPREF0220_2865 - 3 2012 1
CDS ysxC ZP_06893619.1 HMPREF0220_2866 ribosome biogenesis GTP-binding protein YsxC 1993 2613 1
CDS ysxC EFH06096.1 HMPREF0220_2866 - 1993 2613 1
CDS - ZP_06893620.1 HMPREF0220_2867 major facilitator family transporter 2877 4247 -1
CDS - EFH06097.1 HMPREF0220_2867 - 2877 4247 -1
CDS - ZP_06893621.1 HMPREF0220_2868 ATPase 4823 5902 1
CDS - EFH06098.1 HMPREF0220_2868 - 4823 5902 1
CDS - ZP_06893622.1 HMPREF0220_2869 conserved hypothetical protein 6505 7185 1
CDS - EFH06099.1 HMPREF0220_2869 - 6505 7185 1
CDS gspE ZP_06893623.1 HMPREF0220_2870 general secretion pathway protein E 7178 8557 1
CDS gspE EFH06100.1 HMPREF0220_2870 - 7178 8557 1
CDS - ZP_06893624.1 HMPREF0220_2871 probable type IV pilus-assembly protein 8728 9813 1
CDS - EFH06101.1 HMPREF0220_2871 - 8728 9813 1
CDS - ZP_06893625.1 HMPREF0220_2872 probable type IV pilin 9867 10217 1
CDS - EFH06102.1 HMPREF0220_2872 - 9867 10217 1
CDS - ZP_06893626.1 HMPREF0220_2873 conserved hypothetical protein 10271 11143 1
CDS - EFH06103.1 HMPREF0220_2873 - 10271 11143 1
CDS - ZP_06893627.1 HMPREF0220_2874 conserved hypothetical protein 11144 11587 1
CDS - EFH06104.1 HMPREF0220_2874 - 11144 11587 1
CDS - ZP_06893628.1 HMPREF0220_2875 conserved hypothetical protein 11602 12186 1
CDS - EFH06105.1 HMPREF0220_2875 - 11602 12186 1
CDS - ZP_06893629.1 HMPREF0220_2876 probable protein translocase 12427 13476 1
CDS - EFH06106.1 HMPREF0220_2876 - 12427 13476 1
CDS - ZP_06893630.1 HMPREF0220_2877 conserved hypothetical protein 13557 13922 1
CDS - EFH06107.1 HMPREF0220_2877 - 13557 13922 1
CDS - ZP_06893631.1 HMPREF0220_2878 conserved hypothetical protein 13927 14244 1
CDS - EFH06108.1 HMPREF0220_2878 - 13927 14244 1
CDS - ZP_06893632.1 HMPREF0220_2879 oxidoreductase 14292 15896 1
CDS - EFH06109.1 HMPREF0220_2879 - 14292 15896 1
CDS - ZP_06893633.1 HMPREF0220_2880 Na/Pi-cotransporter family protein 16019 17647 1
CDS - EFH06110.1 HMPREF0220_2880 - 16019 17647 1
CDS pgi ZP_06893634.1 HMPREF0220_2881 glucose-6-phosphate isomerase 17911 19260 1
CDS pgi EFH06111.1 HMPREF0220_2881 - 17911 19260 1
CDS - ZP_06893635.1 HMPREF0220_2882 protease 19301 20494 1
CDS - EFH06112.1 HMPREF0220_2882 - 19301 20494 1
CDS pflC ZP_06893636.1 HMPREF0220_2883 pyruvate formate-lyase activating enzyme 20839 21747 1
CDS pflC EFH06113.1 HMPREF0220_2883 - 20839 21747 1
CDS pflD ZP_06893637.1 HMPREF0220_2884 possible formate C-acetyltransferase 21752 24121 1
CDS pflD EFH06114.1 HMPREF0220_2884 - 21752 24121 1
CDS proC ZP_06893638.1 HMPREF0220_2885 pyrroline-5-carboxylate reductase 24446 25249 1
CDS proC EFH06115.1 HMPREF0220_2885 - 24446 25249 1
CDS atoC ZP_06893639.1 HMPREF0220_2886 AAA superfamily ATPase with N 25840 28596 1
CDS atoC EFH06116.1 HMPREF0220_2886 - 25840 28596 1
CDS sorB ZP_06893640.1 HMPREF0220_2887 PTS family mannose/fructose/sorbose porter, IIB component 28728 29207 1
CDS sorB EFH06117.1 HMPREF0220_2887 - 28728 29207 1
CDS - ZP_06893641.1 HMPREF0220_2888 PTS family mannose/fructose/sorbose porter component IIA 29223 29645 1
CDS - EFH06118.1 HMPREF0220_2888 - 29223 29645 1
CDS levF ZP_06893642.1 HMPREF0220_2889 PTS family mannose/fructose/sorbose porter, IIC component 29680 30471 1
CDS levF EFH06119.1 HMPREF0220_2889 - 29680 30471 1
CDS levG ZP_06893643.1 HMPREF0220_2890 PTS family mannose/fructose/sorbose porter, IID component 30464 31264 1
CDS levG EFH06120.1 HMPREF0220_2890 - 30464 31264 1
CDS - ZP_06893644.1 HMPREF0220_2891 probable phosphosugar isomerase 31312 32367 1
CDS - EFH06121.1 HMPREF0220_2891 - 31312 32367 1
CDS feoB ZP_06893645.1 HMPREF0220_2892 FeoB family ferrous iron (Fe2+) uptake protein 32526 34472 -1
CDS feoB EFH06122.1 HMPREF0220_2892 - 32526 34472 -1
CDS feoA3 ZP_06893646.1 HMPREF0220_2893 probable ferrous iron transport protein A 34490 34708 -1
CDS feoA3 EFH06123.1 HMPREF0220_2893 - 34490 34708 -1
CDS - ZP_06893647.1 HMPREF0220_2894 heptaprenyl diphosphate synthase component I 34915 35424 1
CDS - EFH06124.1 HMPREF0220_2894 - 34915 35424 1
CDS - ZP_06893648.1 HMPREF0220_2895 conserved hypothetical protein 35460 35663 1
CDS - EFH06125.1 HMPREF0220_2895 - 35460 35663 1
CDS - ZP_06893649.1 HMPREF0220_2896 Mg2+ transporter-C family protein 35814 36479 1
CDS - EFH06126.1 HMPREF0220_2896 - 35814 36479 1
CDS pepF ZP_06893650.1 HMPREF0220_2897 oligoendopeptidase F 36545 38329 1
CDS pepF EFH06127.1 HMPREF0220_2897 - 36545 38329 1
CDS pstS ZP_06893651.1 HMPREF0220_2898 phosphate ABC superfamily ATP binding cassette transporter, binding protein 38582 39433 1
CDS pstS EFH06128.1 HMPREF0220_2898 - 38582 39433 1
CDS - ZP_06893652.1 HMPREF0220_2899 response regulator 40329 41006 1
CDS - EFH06129.1 HMPREF0220_2899 - 40329 41006 1
CDS - ZP_06893653.1 HMPREF0220_2900 two component sensor histidine kinase 41066 43093 1
CDS - EFH06130.1 HMPREF0220_2900 - 41066 43093 1
CDS - ZP_06893654.1 HMPREF0220_2901 two component response regulator 43143 43823 1
CDS - EFH06131.1 HMPREF0220_2901 - 43143 43823 1
CDS - ZP_06893655.1 HMPREF0220_2902 conserved hypothetical protein 44165 44389 1
CDS - EFH06132.1 HMPREF0220_2902 - 44165 44389 1
CDS pstC ZP_06893656.1 HMPREF0220_2903 phosphate ABC superfamily ATP binding cassette transporter, permease protein 44770 45687 1
CDS pstC EFH06133.1 HMPREF0220_2903 - 44770 45687 1
CDS pstA ZP_06893657.1 HMPREF0220_2904 phosphate ABC superfamily ATP binding cassette transporter, membrane protein 45689 46513 1
CDS pstA EFH06134.1 HMPREF0220_2904 - 45689 46513 1
CDS pstB ZP_06893658.1 HMPREF0220_2905 phosphate ABC superfamily ATP binding cassette transporter, ABC protein 46532 47296 1
CDS pstB EFH06135.1 HMPREF0220_2905 - 46532 47296 1
CDS phoU ZP_06893659.1 HMPREF0220_2906 phosphate transport system regulatory protein PhoU 47324 47977 1
CDS phoU EFH06136.1 HMPREF0220_2906 - 47324 47977 1
CDS - ZP_06893660.1 HMPREF0220_2907 conserved hypothetical protein 48135 48655 1
CDS - EFH06137.1 HMPREF0220_2907 - 48135 48655 1