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Clostridium difficile NAP08 contig00103, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06893661.1 HMPREF0220_2908 conserved hypothetical protein 1 344 1
CDS - EFH06017.1 HMPREF0220_2908 - 1 344 1
CDS - ZP_06893662.1 HMPREF0220_2909 probable polysaccharide deacetylase 392 1219 1
CDS - EFH06018.1 HMPREF0220_2909 - 392 1219 1
CDS valS ZP_06893663.1 HMPREF0220_2910 valine--tRNA ligase 1858 4524 1
CDS valS EFH06019.1 HMPREF0220_2910 - 1858 4524 1
CDS virR ZP_06893664.1 HMPREF0220_2911 two component system response regulator 4948 5658 1
CDS virR EFH06020.1 HMPREF0220_2911 - 4948 5658 1
CDS - ZP_06893665.1 HMPREF0220_2912 probable serine protease 6686 7717 1
CDS - EFH06021.1 HMPREF0220_2912 - 6686 7717 1
CDS - ZP_06893666.1 HMPREF0220_2913 hypothetical protein 7712 7831 -1
CDS - EFH06022.1 HMPREF0220_2913 - 7712 7831 -1
CDS folC ZP_06893667.1 HMPREF0220_2914 possible tetrahydrofolate synthase 7850 9148 1
CDS folC EFH06023.1 HMPREF0220_2914 - 7850 9148 1
CDS - ZP_06893668.1 HMPREF0220_2915 conserved hypothetical protein 9268 9528 -1
CDS - EFH06024.1 HMPREF0220_2915 - 9268 9528 -1
CDS - ZP_06893669.1 HMPREF0220_2916 conserved hypothetical protein 9661 10527 1
CDS - EFH06025.1 HMPREF0220_2916 - 9661 10527 1
CDS - ZP_06893670.1 HMPREF0220_2917 conserved hypothetical protein 10531 11076 -1
CDS - EFH06026.1 HMPREF0220_2917 - 10531 11076 -1
CDS sspB ZP_06893671.1 HMPREF0220_2918 small acid-soluble spore protein B 11258 11461 -1
CDS sspB EFH06027.1 HMPREF0220_2918 - 11258 11461 -1
CDS - ZP_06893672.1 HMPREF0220_2919 chitooligosaccharide deacetylase 11752 12516 1
CDS - EFH06028.1 HMPREF0220_2919 - 11752 12516 1
CDS - ZP_06893673.1 HMPREF0220_2920 probable electron transfer protein 12906 14219 1
CDS - EFH06029.1 HMPREF0220_2920 - 12906 14219 1
CDS - ZP_06893674.1 HMPREF0220_2921 hypothetical protein 15002 15130 1
CDS - EFH06030.1 HMPREF0220_2921 - 15002 15130 1
CDS - ZP_06893675.1 HMPREF0220_2922 probable surface protein 15238 17352 1
CDS - EFH06031.1 HMPREF0220_2922 - 15238 17352 1
CDS pspF4 ZP_06893676.1 HMPREF0220_2923 sigma-54 dependent transcriptional regulator 17759 19519 1
CDS pspF4 EFH06032.1 HMPREF0220_2923 - 17759 19519 1
CDS - ZP_06893677.1 HMPREF0220_2924 Holliday junction ATP-dependent DNA helicase RuvA 19800 19931 1
CDS - EFH06033.1 HMPREF0220_2924 - 19800 19931 1
CDS prdA ZP_06893678.1 HMPREF0220_2925 D-proline reductase 19948 21828 1
CDS prdA EFH06034.1 HMPREF0220_2925 - 19948 21828 1
CDS - ZP_06893679.1 HMPREF0220_2926 conserved hypothetical protein 21909 22193 1
CDS - EFH06035.1 HMPREF0220_2926 - 21909 22193 1
CDS prdB ZP_06893680.1 HMPREF0220_2927 D-proline reductase 22231 22683 1
CDS prdB EFH06036.1 HMPREF0220_2927 - 22231 22683 1
CDS prdB2 ZP_06893681.1 HMPREF0220_2928 D-proline reductase 22711 22956 1
CDS prdB2 EFH06037.1 HMPREF0220_2928 - 22711 22956 1
CDS prdA2 ZP_06893682.1 HMPREF0220_2929 D-proline reductase 23036 23794 1
CDS prdA2 EFH06038.1 HMPREF0220_2929 - 23036 23794 1
CDS prdA3 ZP_06893683.1 HMPREF0220_2930 D-proline reductase 23809 24276 1
CDS prdA3 EFH06039.1 HMPREF0220_2930 - 23809 24276 1
CDS - ZP_06893684.1 HMPREF0220_2931 D-proline reductase (dithiol) 24293 24775 1
CDS - EFH06040.1 HMPREF0220_2931 - 24293 24775 1
CDS - ZP_06893685.1 HMPREF0220_2932 proline racemase 24795 25802 1
CDS - EFH06041.1 HMPREF0220_2932 - 24795 25802 1
CDS - ZP_06893686.1 HMPREF0220_2933 membrane protein 25922 26803 1
CDS - EFH06042.1 HMPREF0220_2933 - 25922 26803 1
CDS ssb2 ZP_06893687.1 HMPREF0220_2934 single-strand DNA-binding protein 27469 28104 1
CDS ssb2 EFH06043.1 HMPREF0220_2934 - 27469 28104 1
CDS - ZP_06893688.1 HMPREF0220_2935 conserved hypothetical protein 28288 28857 1
CDS - EFH06044.1 HMPREF0220_2935 - 28288 28857 1
CDS - ZP_06893689.1 HMPREF0220_2936 hypothetical protein 28935 29072 1
CDS - EFH06045.1 HMPREF0220_2936 - 28935 29072 1
CDS pspF5 ZP_06893690.1 HMPREF0220_2937 NtrC family transcriptional regulator 29069 30844 1
CDS pspF5 EFH06046.1 HMPREF0220_2937 - 29069 30844 1
CDS mpg ZP_06893691.1 HMPREF0220_2938 3-methyladenine DNA glycosylase 30915 31067 -1
CDS mpg EFH06047.1 HMPREF0220_2938 - 30915 31067 -1
CDS - ZP_06893692.1 HMPREF0220_2939 conserved hypothetical protein 31268 32575 1
CDS - EFH06048.1 HMPREF0220_2939 - 31268 32575 1
CDS hpt2 ZP_06893693.1 HMPREF0220_2940 hypoxanthine phosphoribosyltransferase 32904 33443 1
CDS hpt2 EFH06049.1 HMPREF0220_2940 - 32904 33443 1
CDS bclA2 ZP_06893694.1 HMPREF0220_2941 collagen triple helix repeat protein 33800 35485 1
CDS bclA2 EFH06050.1 HMPREF0220_2941 - 33800 35485 1
CDS dapB ZP_06893695.1 HMPREF0220_2942 dihydrodipicolinate reductase 35759 36514 -1
CDS dapB EFH06051.1 HMPREF0220_2942 - 35759 36514 -1
CDS - ZP_06893696.1 HMPREF0220_2943 SPFH domain/band 7 family protein 36942 37946 1
CDS - EFH06052.1 HMPREF0220_2943 - 36942 37946 1
CDS dapD ZP_06893697.1 HMPREF0220_2944 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 38229 38945 -1
CDS dapD EFH06053.1 HMPREF0220_2944 - 38229 38945 -1
CDS dapB2 ZP_06893698.1 HMPREF0220_2945 dihydrodipicolinate reductase 39127 39876 -1
CDS dapB2 EFH06054.1 HMPREF0220_2945 - 39127 39876 -1
CDS dapA2 ZP_06893699.1 HMPREF0220_2946 dihydrodipicolinate synthase 39944 40831 -1
CDS dapA2 EFH06055.1 HMPREF0220_2946 - 39944 40831 -1
CDS asd ZP_06893700.1 HMPREF0220_2947 aspartate-semialdehyde dehydrogenase 40948 41949 -1
CDS asd EFH06056.1 HMPREF0220_2947 - 40948 41949 -1
CDS dapA ZP_06893701.1 HMPREF0220_2948 dihydrodipicolinate synthase 42379 43260 -1
CDS dapA EFH06057.1 HMPREF0220_2948 - 42379 43260 -1
CDS sdaA ZP_06893702.1 HMPREF0220_2949 L-serine dehydratase 43583 44776 1
CDS sdaA EFH06058.1 HMPREF0220_2949 - 43583 44776 1
CDS - ZP_06893703.1 HMPREF0220_2950 possible hippurate hydrolase 44981 46099 1
CDS - EFH06059.1 HMPREF0220_2950 - 44981 46099 1
CDS - ZP_06893704.1 HMPREF0220_2951 small acid-soluble spore protein 46221 46475 1
CDS - EFH06060.1 HMPREF0220_2951 - 46221 46475 1
CDS - ZP_06893705.1 HMPREF0220_2952 methyltransferase 46462 47208 1
CDS - EFH06061.1 HMPREF0220_2952 - 46462 47208 1
CDS hslO ZP_06893706.1 HMPREF0220_2953 chaperonin HslO 47492 48367 1
CDS hslO EFH06062.1 HMPREF0220_2953 - 47492 48367 1
CDS - ZP_06893707.1 HMPREF0220_2954 conserved hypothetical protein 48757 49557 1
CDS - EFH06063.1 HMPREF0220_2954 - 48757 49557 1
CDS - ZP_06893708.1 HMPREF0220_2955 conserved hypothetical protein 49578 49733 1
CDS - EFH06064.1 HMPREF0220_2955 - 49578 49733 1
CDS drrC ZP_06893709.1 HMPREF0220_2956 daunorubicin resistance protein 50084 52324 1
CDS drrC EFH06065.1 HMPREF0220_2956 - 50084 52324 1
CDS proWX ZP_06893710.1 HMPREF0220_2957 glycine betaine/proline ABC superfamily ATP binding cassette transporter, binding protein 52737 54272 1
CDS proWX EFH06066.1 HMPREF0220_2957 - 52737 54272 1