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Clostridium difficile NAP08 contig00107, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS smpB ZP_06893774.1 HMPREF0220_3021 SsrA-binding protein 292 747 1
CDS smpB EFH05897.1 HMPREF0220_3021 - 292 747 1
CDS - ZP_06893775.1 HMPREF0220_3022 conserved hypothetical protein 1329 3260 1
CDS - EFH05898.1 HMPREF0220_3022 - 1329 3260 1
CDS ppc ZP_06893776.1 HMPREF0220_3023 phosphoenolpyruvate carboxylase 3475 3726 1
CDS ppc EFH05899.1 HMPREF0220_3023 - 3475 3726 1
CDS - ZP_06893777.1 HMPREF0220_3024 conserved hypothetical protein 3754 4053 1
CDS - EFH05900.1 HMPREF0220_3024 - 3754 4053 1
CDS - ZP_06893778.1 HMPREF0220_3025 hypothetical protein 4079 4678 1
CDS - EFH05901.1 HMPREF0220_3025 - 4079 4678 1
CDS xerC ZP_06893779.1 HMPREF0220_3026 integrase 4830 5105 -1
CDS xerC EFH05902.1 HMPREF0220_3026 - 4830 5105 -1
CDS - ZP_06893780.1 HMPREF0220_3027 phage integrase 5179 5979 -1
CDS - EFH05903.1 HMPREF0220_3027 - 5179 5979 -1
CDS - ZP_06893781.1 HMPREF0220_3028 conserved hypothetical protein 6028 6192 -1
CDS - EFH05904.1 HMPREF0220_3028 - 6028 6192 -1
CDS srtB2 ZP_06893782.1 HMPREF0220_3029 sortase B 6299 6712 -1
CDS srtB2 EFH05905.1 HMPREF0220_3029 - 6299 6712 -1
CDS - ZP_06893783.1 HMPREF0220_3030 probable serine-aspartate-rich surface anchored fibrinogen-binding protein 6982 10458 1
CDS - EFH05906.1 HMPREF0220_3030 - 6982 10458 1
CDS - ZP_06893784.1 HMPREF0220_3031 DeoR family transcriptional regulator 12183 13145 1
CDS - EFH05907.1 HMPREF0220_3031 - 12183 13145 1
CDS - ZP_06893785.1 HMPREF0220_3032 ThiJ/pfpI family protein 13224 13853 1
CDS - EFH05908.1 HMPREF0220_3032 - 13224 13853 1
CDS - ZP_06893786.1 HMPREF0220_3033 conserved hypothetical protein 14839 14961 1
CDS - EFH05909.1 HMPREF0220_3033 - 14839 14961 1
CDS - ZP_06893787.1 HMPREF0220_3034 conserved hypothetical protein 15161 15577 1
CDS - EFH05910.1 HMPREF0220_3034 - 15161 15577 1
CDS - ZP_06893788.1 HMPREF0220_3035 cro/CI family transcriptional regulator 15578 15790 1
CDS - EFH05911.1 HMPREF0220_3035 - 15578 15790 1
CDS - ZP_06893789.1 HMPREF0220_3036 conserved hypothetical protein 16094 16225 1
CDS - EFH05912.1 HMPREF0220_3036 - 16094 16225 1
CDS licT3 ZP_06893790.1 HMPREF0220_3037 transcription antiterminator LicT 16828 17661 1
CDS licT3 EFH05913.1 HMPREF0220_3037 - 16828 17661 1
CDS bglP ZP_06893791.1 HMPREF0220_3038 phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component 17787 19628 1
CDS bglP EFH05914.1 HMPREF0220_3038 - 17787 19628 1
CDS bglA ZP_06893792.1 HMPREF0220_3039 6-phospho-beta-glucosidase 19618 21084 1
CDS bglA EFH05915.1 HMPREF0220_3039 - 19618 21084 1
CDS - ZP_06893793.1 HMPREF0220_3040 conserved hypothetical protein 21719 21853 1
CDS - EFH05916.1 HMPREF0220_3040 - 21719 21853 1
CDS - ZP_06893794.1 HMPREF0220_3041 iron ABC superfamily ATP binding cassette transporter substrate-binding protein 22050 23093 1
CDS - EFH05917.1 HMPREF0220_3041 - 22050 23093 1
CDS - ZP_06893795.1 HMPREF0220_3042 conserved hypothetical protein 23353 24228 1
CDS - EFH05918.1 HMPREF0220_3042 - 23353 24228 1
CDS - ZP_06893796.1 HMPREF0220_3043 Fe(3+) ions ABC superfamily ATP binding cassette transporter, ABC protein 24247 25239 1
CDS - EFH05919.1 HMPREF0220_3043 - 24247 25239 1
CDS - ZP_06893797.1 HMPREF0220_3044 ABC superfamily ATP binding cassette transporter permease 25241 26935 1
CDS - EFH05920.1 HMPREF0220_3044 - 25241 26935 1
CDS iolJ ZP_06893798.1 HMPREF0220_3045 5-dehydro-2-deoxyphosphogluconate aldolase 27487 28365 1
CDS iolJ EFH05921.1 HMPREF0220_3045 - 27487 28365 1
CDS - ZP_06893799.1 HMPREF0220_3046 PTS family fructose/mannitol porter component IIBC 28401 30296 1
CDS - EFH05922.1 HMPREF0220_3046 - 28401 30296 1
CDS - ZP_06893800.1 HMPREF0220_3047 transcription antiterminator 30563 32470 1
CDS - EFH05923.1 HMPREF0220_3047 - 30563 32470 1
CDS fruA2 ZP_06893801.1 HMPREF0220_3048 PTS family fructose/mannitol porter component IIA 32460 32909 1
CDS fruA2 EFH05924.1 HMPREF0220_3048 - 32460 32909 1
CDS - ZP_06893802.1 HMPREF0220_3049 AraC family transcriptional regulator 33009 33164 1
CDS - EFH05925.1 HMPREF0220_3049 - 33009 33164 1
CDS licT4 ZP_06893803.1 HMPREF0220_3050 transcription antiterminator LicT 33327 34169 1
CDS licT4 EFH05926.1 HMPREF0220_3050 - 33327 34169 1
CDS bglP2 ZP_06893804.1 HMPREF0220_3051 phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component 34245 36242 1
CDS bglP2 EFH05927.1 HMPREF0220_3051 - 34245 36242 1
CDS ascB ZP_06893805.1 HMPREF0220_3052 6-phospho-beta-glucosidase 36303 37730 1
CDS ascB EFH05928.1 HMPREF0220_3052 - 36303 37730 1
CDS - ZP_06893806.1 HMPREF0220_3053 nitroreductase fused to ferredoxin domain protein 38143 38925 1
CDS - EFH05929.1 HMPREF0220_3053 - 38143 38925 1
CDS - ZP_06893807.1 HMPREF0220_3054 ArsR family transcriptional regulator 38941 39306 1
CDS - EFH05930.1 HMPREF0220_3054 - 38941 39306 1
CDS - ZP_06893808.1 HMPREF0220_3055 probable flavodoxin 39466 40215 -1
CDS - EFH05931.1 HMPREF0220_3055 - 39466 40215 -1
CDS - ZP_06893809.1 HMPREF0220_3056 transcriptional regulator 40639 41196 -1
CDS - EFH05932.1 HMPREF0220_3056 - 40639 41196 -1
CDS - ZP_06893810.1 HMPREF0220_3057 major facilitator family transporter 41447 42745 1
CDS - EFH05933.1 HMPREF0220_3057 - 41447 42745 1
CDS - ZP_06893811.1 HMPREF0220_3058 NADH oxidase 42717 44666 1
CDS - EFH05934.1 HMPREF0220_3058 - 42717 44666 1
CDS - ZP_06893812.1 HMPREF0220_3059 transcriptional regulator 45095 45529 1
CDS - EFH05935.1 HMPREF0220_3059 - 45095 45529 1
CDS - ZP_06893813.1 HMPREF0220_3060 macrolide glycosyltransferase 45561 46748 1
CDS - EFH05936.1 HMPREF0220_3060 - 45561 46748 1
CDS - ZP_06893814.1 HMPREF0220_3061 conserved hypothetical protein 46940 47344 1
CDS - EFH05937.1 HMPREF0220_3061 - 46940 47344 1
CDS - ZP_06893815.1 HMPREF0220_3062 LytTr family DNA-binding response regulator 47837 48547 1
CDS - EFH05938.1 HMPREF0220_3062 - 47837 48547 1
CDS - ZP_06893816.1 HMPREF0220_3063 sensor histidine kinase 48541 49878 1
CDS - EFH05939.1 HMPREF0220_3063 - 48541 49878 1
CDS - ZP_06893817.1 HMPREF0220_3064 hypothetical protein 49928 50050 1
CDS - EFH05940.1 HMPREF0220_3064 - 49928 50050 1
CDS - ZP_06893818.1 HMPREF0220_3065 conserved hypothetical protein 50055 52622 1
CDS - EFH05941.1 HMPREF0220_3065 - 50055 52622 1
CDS - ZP_06893819.1 HMPREF0220_3066 ABC superfamily ATP binding cassette transporter, ABC protein 52681 53364 1
CDS - EFH05942.1 HMPREF0220_3066 - 52681 53364 1
CDS licT5 ZP_06893820.1 HMPREF0220_3067 transcription antiterminator LicT 53627 54487 1
CDS licT5 EFH05943.1 HMPREF0220_3067 - 53627 54487 1
CDS bglP3 ZP_06893821.1 HMPREF0220_3068 phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component 54477 56348 1
CDS bglP3 EFH05944.1 HMPREF0220_3068 - 54477 56348 1
CDS bglA2 ZP_06893822.1 HMPREF0220_3069 6-phospho-beta-glucosidase 56368 57810 1
CDS bglA2 EFH05945.1 HMPREF0220_3069 - 56368 57810 1
CDS - ZP_06893823.1 HMPREF0220_3070 oxygen-insensitive NAD(P)H nitroreductase 58089 58622 -1
CDS - EFH05946.1 HMPREF0220_3070 - 58089 58622 -1