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Clostridium difficile NAP08 contig00110, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06893898.1 HMPREF0220_3145 possible transcriptional regulator RpiR 85 936 1
CDS - EFH05816.1 HMPREF0220_3145 - 85 936 1
CDS - ZP_06893899.1 HMPREF0220_3146 conserved hypothetical protein 1547 2581 1
CDS - EFH05817.1 HMPREF0220_3146 - 1547 2581 1
CDS - ZP_06893900.1 HMPREF0220_3147 conserved hypothetical protein 2697 3716 -1
CDS - EFH05818.1 HMPREF0220_3147 - 2697 3716 -1
CDS pip ZP_06893901.1 HMPREF0220_3148 prolyl aminopeptidase 4098 5024 1
CDS pip EFH05819.1 HMPREF0220_3148 - 4098 5024 1
CDS - ZP_06893902.1 HMPREF0220_3149 conserved hypothetical protein 6248 7033 -1
CDS - EFH05820.1 HMPREF0220_3149 - 6248 7033 -1
CDS - ZP_06893903.1 HMPREF0220_3150 cysteine protease 8004 10211 1
CDS - EFH05821.1 HMPREF0220_3150 - 8004 10211 1
CDS - ZP_06893904.1 HMPREF0220_3151 conserved hypothetical protein 10625 11428 1
CDS - EFH05822.1 HMPREF0220_3151 - 10625 11428 1
CDS - ZP_06893905.1 HMPREF0220_3152 ATPase 11440 12570 1
CDS - EFH05823.1 HMPREF0220_3152 - 11440 12570 1
CDS - ZP_06893906.1 HMPREF0220_3153 conserved protein, probable metal-dependent peptidase 12574 13983 1
CDS - EFH05824.1 HMPREF0220_3153 - 12574 13983 1
CDS - ZP_06893907.1 HMPREF0220_3154 CarD family transcriptional regulator 14194 14703 1
CDS - EFH05825.1 HMPREF0220_3154 - 14194 14703 1
CDS - ZP_06893908.1 HMPREF0220_3155 permease 16565 17920 1
CDS - EFH05826.1 HMPREF0220_3155 - 16565 17920 1
CDS phzF ZP_06893909.1 HMPREF0220_3156 phenazine biosynthesis protein PhzF family protein 18147 19028 -1
CDS phzF EFH05827.1 HMPREF0220_3156 - 18147 19028 -1
CDS - ZP_06893910.1 HMPREF0220_3157 sugar-specific transcriptional regulator TrmB superfamily protein 19015 19767 -1
CDS - EFH05828.1 HMPREF0220_3157 - 19015 19767 -1
CDS trxA2 ZP_06893911.1 HMPREF0220_3158 thioredoxin 20019 20336 1
CDS trxA2 EFH05829.1 HMPREF0220_3158 - 20019 20336 1
CDS trxB3 ZP_06893912.1 HMPREF0220_3159 possible thioredoxin-disulfide reductase 20502 21386 1
CDS trxB3 EFH05830.1 HMPREF0220_3159 - 20502 21386 1
CDS feuP ZP_06893913.1 HMPREF0220_3160 transcriptional regulator FeuP 21773 22444 1
CDS feuP EFH05831.1 HMPREF0220_3160 - 21773 22444 1
CDS - ZP_06893914.1 HMPREF0220_3161 sensory transduction histidine kinase 22432 23478 1
CDS - EFH05832.1 HMPREF0220_3161 - 22432 23478 1
CDS - ZP_06893915.1 HMPREF0220_3162 conserved hypothetical protein 23540 24898 1
CDS - EFH05833.1 HMPREF0220_3162 - 23540 24898 1
CDS - ZP_06893916.1 HMPREF0220_3163 ABC superfamily ATP binding cassette transporter, ABC protein 24909 25595 1
CDS - EFH05834.1 HMPREF0220_3163 - 24909 25595 1
CDS - ZP_06893917.1 HMPREF0220_3164 transcriptional regulator 26073 26819 1
CDS - EFH05835.1 HMPREF0220_3164 - 26073 26819 1
CDS - ZP_06893918.1 HMPREF0220_3165 probable iron-sulfur-binding protein 26879 27553 1
CDS - EFH05836.1 HMPREF0220_3165 - 26879 27553 1
CDS - ZP_06893919.1 HMPREF0220_3166 conserved hypothetical protein 28193 29137 1
CDS - EFH05837.1 HMPREF0220_3166 - 28193 29137 1
CDS ydiA ZP_06893920.1 HMPREF0220_3167 permease 29306 30238 1
CDS ydiA EFH05838.1 HMPREF0220_3167 - 29306 30238 1
CDS - ZP_06893921.1 HMPREF0220_3168 C_GCAxxG_C_C family protein 30342 30809 1
CDS - EFH05839.1 HMPREF0220_3168 - 30342 30809 1
CDS - ZP_06893922.1 HMPREF0220_3169 DMT superfamily drug/metabolite transporter 31051 31923 -1
CDS - EFH05840.1 HMPREF0220_3169 - 31051 31923 -1
CDS - ZP_06893923.1 HMPREF0220_3170 PRD/PTS system IIA 2 domain protein 32071 34035 1
CDS - EFH05841.1 HMPREF0220_3170 - 32071 34035 1
CDS - ZP_06893924.1 HMPREF0220_3171 PTS family porter 34035 34496 1
CDS - EFH05842.1 HMPREF0220_3171 - 34035 34496 1
CDS frwB2 ZP_06893925.1 HMPREF0220_3172 PTS family fructose porter, IIB component 34499 34819 1
CDS frwB2 EFH05843.1 HMPREF0220_3172 - 34499 34819 1
CDS - ZP_06893926.1 HMPREF0220_3173 PTS family porter 34820 35935 1
CDS - EFH05844.1 HMPREF0220_3173 - 34820 35935 1
CDS - ZP_06893927.1 HMPREF0220_3174 family 38 glycosyl hydrolase 35965 38565 1
CDS - EFH05845.1 HMPREF0220_3174 - 35965 38565 1
CDS - ZP_06893928.1 HMPREF0220_3175 feruloyl esterase 39016 39351 1
CDS - EFH05846.1 HMPREF0220_3175 - 39016 39351 1
CDS - ZP_06893929.1 HMPREF0220_3176 cytochrome C biogenesis protein transmembrane protein family protein 39488 40765 1
CDS - EFH05847.1 HMPREF0220_3176 - 39488 40765 1
CDS merA ZP_06893930.1 HMPREF0220_3177 pyridine nucleotide-disulfide dehydrogenase 40886 42274 1
CDS merA EFH05848.1 HMPREF0220_3177 - 40886 42274 1
CDS - ZP_06893931.1 HMPREF0220_3178 conserved hypothetical protein 43057 43356 1
CDS - EFH05849.1 HMPREF0220_3178 - 43057 43356 1
CDS - ZP_06893932.1 HMPREF0220_3179 ErfK/YbiS/YcfS/YnhG family protein 43472 44341 1
CDS - EFH05850.1 HMPREF0220_3179 - 43472 44341 1
CDS adhB ZP_06893933.1 HMPREF0220_3180 alcohol dehydrogenase 44522 45667 -1
CDS adhB EFH05851.1 HMPREF0220_3180 - 44522 45667 -1
CDS - ZP_06893934.1 HMPREF0220_3181 IclR family transcriptional regulator 45999 46775 -1
CDS - EFH05852.1 HMPREF0220_3181 - 45999 46775 -1
CDS kdgT ZP_06893935.1 HMPREF0220_3182 2-keto-3-deoxygluconate permease 1 47365 48339 1
CDS kdgT EFH05853.1 HMPREF0220_3182 - 47365 48339 1
CDS - ZP_06893936.1 HMPREF0220_3183 UxaA family hydrolase 48437 48742 1
CDS - EFH05854.1 HMPREF0220_3183 - 48437 48742 1
CDS - ZP_06893937.1 HMPREF0220_3184 UxaA family hydrolase 48897 50057 1
CDS - EFH05855.1 HMPREF0220_3184 - 48897 50057 1
CDS fahA ZP_06893938.1 HMPREF0220_3185 fumarylacetoacetate hydrolase 50107 51009 1
CDS fahA EFH05856.1 HMPREF0220_3185 - 50107 51009 1
CDS - ZP_06893939.1 HMPREF0220_3186 possible dihydrodipicolinate synthase 51089 51982 1
CDS - EFH05857.1 HMPREF0220_3186 - 51089 51982 1