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Clostridium difficile NAP08 contig00115, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06894006.1 HMPREF0220_3253 conserved hypothetical protein 61 525 -1
CDS - EFH05696.1 HMPREF0220_3253 - 61 525 -1
CDS - ZP_06894007.1 HMPREF0220_3254 iron compound ABC superfamily ATP binding cassette transporter, binding protein 794 1732 1
CDS - EFH05697.1 HMPREF0220_3254 - 794 1732 1
CDS fhuB ZP_06894008.1 HMPREF0220_3255 ferrichrome ABC superfamily ATP binding cassette transporter, permease protein 1861 2874 1
CDS fhuB EFH05698.1 HMPREF0220_3255 - 1861 2874 1
CDS fhuG ZP_06894009.1 HMPREF0220_3256 ferrichrome ABC superfamily ATP binding cassette transporter, permease protein 2880 3902 1
CDS fhuG EFH05699.1 HMPREF0220_3256 - 2880 3902 1
CDS pstB2 ZP_06894010.1 HMPREF0220_3257 phosphate ABC superfamily ATP binding cassette transporter, ABC protein 3917 4699 1
CDS pstB2 EFH05700.1 HMPREF0220_3257 - 3917 4699 1
CDS - ZP_06894011.1 HMPREF0220_3258 MATE efflux family protein 4711 6051 1
CDS - EFH05701.1 HMPREF0220_3258 - 4711 6051 1
CDS - ZP_06894012.1 HMPREF0220_3259 probable signaling protein 6142 8424 -1
CDS - EFH05702.1 HMPREF0220_3259 - 6142 8424 -1
CDS - ZP_06894013.1 HMPREF0220_3260 UxaA family hydrolase 8754 9917 -1
CDS - EFH05703.1 HMPREF0220_3260 - 8754 9917 -1
CDS - ZP_06894014.1 HMPREF0220_3261 UxaA family hydrolase 9930 10205 -1
CDS - EFH05704.1 HMPREF0220_3261 - 9930 10205 -1
CDS - ZP_06894015.1 HMPREF0220_3262 2-keto-3-deoxygluconate permease 2 10226 11200 -1
CDS - EFH05705.1 HMPREF0220_3262 - 10226 11200 -1
CDS - ZP_06894016.1 HMPREF0220_3263 sigma-54 dependent transcriptional regulator 11470 13383 -1
CDS - EFH05706.1 HMPREF0220_3263 - 11470 13383 -1
CDS - ZP_06894017.1 HMPREF0220_3264 probable oxidoreductase 13559 14773 -1
CDS - EFH05707.1 HMPREF0220_3264 - 13559 14773 -1
CDS tldD ZP_06894018.1 HMPREF0220_3265 U62 family peptidase 2 TldD 15017 16399 1
CDS tldD EFH05708.1 HMPREF0220_3265 - 15017 16399 1
CDS pmbA ZP_06894019.1 HMPREF0220_3266 peptide maturation protein PmbA 16411 17760 1
CDS pmbA EFH05709.1 HMPREF0220_3266 - 16411 17760 1
CDS cotJC2 ZP_06894020.1 HMPREF0220_3267 cotJC protein 17910 18443 1
CDS cotJC2 EFH05710.1 HMPREF0220_3267 - 17910 18443 1
CDS - ZP_06894021.1 HMPREF0220_3268 non-heme chloroperoxidase 18527 19336 1
CDS - EFH05711.1 HMPREF0220_3268 - 18527 19336 1
CDS - ZP_06894022.1 HMPREF0220_3269 probable sigma-54-dependent transcriptional regulator 19747 21792 1
CDS - EFH05712.1 HMPREF0220_3269 - 19747 21792 1
CDS - ZP_06894023.1 HMPREF0220_3270 membrane dipeptidase superfamily protein 22038 23252 1
CDS - EFH05713.1 HMPREF0220_3270 - 22038 23252 1
CDS - ZP_06894024.1 HMPREF0220_3271 conserved hypothetical protein 23304 23999 1
CDS - EFH05714.1 HMPREF0220_3271 - 23304 23999 1
CDS - ZP_06894025.1 HMPREF0220_3272 conserved hypothetical protein 24012 24689 1
CDS - EFH05715.1 HMPREF0220_3272 - 24012 24689 1
CDS - ZP_06894026.1 HMPREF0220_3273 amidohydrolase 24857 26455 1
CDS - EFH05716.1 HMPREF0220_3273 - 24857 26455 1
CDS - ZP_06894027.1 HMPREF0220_3274 CBS domain protein 26921 28210 1
CDS - EFH05717.1 HMPREF0220_3274 - 26921 28210 1
CDS - ZP_06894028.1 HMPREF0220_3275 HAD-superfamily hydrolase 28239 28919 1
CDS - EFH05718.1 HMPREF0220_3275 - 28239 28919 1
CDS - ZP_06894029.1 HMPREF0220_3276 conserved hypothetical protein 28975 29559 1
CDS - EFH05719.1 HMPREF0220_3276 - 28975 29559 1
CDS dhdh ZP_06894030.1 HMPREF0220_3277 possible trans-1,2-dihydrobenzene-1,2-diol dehydrogenase 29735 30754 1
CDS dhdh EFH05720.1 HMPREF0220_3277 - 29735 30754 1
CDS - ZP_06894031.1 HMPREF0220_3278 DltD C 31044 32234 1
CDS - EFH05721.1 HMPREF0220_3278 - 31044 32234 1
CDS - ZP_06894032.1 HMPREF0220_3279 hypothetical protein 32194 32340 1
CDS - EFH05722.1 HMPREF0220_3279 - 32194 32340 1
CDS dltA ZP_06894033.1 HMPREF0220_3280 D-alanine--D-alanyl carrier protein ligase subunit 1 32355 33869 1
CDS dltA EFH05723.1 HMPREF0220_3280 - 32355 33869 1
CDS dltB ZP_06894034.1 HMPREF0220_3281 D-alanine transfer protein DltB 33869 35017 1
CDS dltB EFH05724.1 HMPREF0220_3281 - 33869 35017 1
CDS dltC ZP_06894035.1 HMPREF0220_3282 D-alanine--D-alanyl carrier protein ligase subunit 2 35036 35266 1
CDS dltC EFH05725.1 HMPREF0220_3282 - 35036 35266 1
CDS - ZP_06894036.1 HMPREF0220_3283 DeoR family transcriptional regulator 35481 36266 1
CDS - EFH05726.1 HMPREF0220_3283 - 35481 36266 1
CDS phnXW ZP_06894037.1 HMPREF0220_3284 2-aminoethylphosphonate--pyruvate transaminase 36541 38466 1
CDS phnXW EFH05727.1 HMPREF0220_3284 - 36541 38466 1
CDS - ZP_06894038.1 HMPREF0220_3285 conserved hypothetical protein 38755 39576 1
CDS - EFH05728.1 HMPREF0220_3285 - 38755 39576 1
CDS - ZP_06894039.1 HMPREF0220_3286 conserved hypothetical protein 39617 40384 1
CDS - EFH05729.1 HMPREF0220_3286 - 39617 40384 1
CDS - ZP_06894040.1 HMPREF0220_3287 conserved hypothetical protein 40392 41012 1
CDS - EFH05730.1 HMPREF0220_3287 - 40392 41012 1
CDS rbr ZP_06894041.1 HMPREF0220_3288 rubrerythrin 41314 41901 -1
CDS rbr EFH05731.1 HMPREF0220_3288 - 41314 41901 -1
CDS - ZP_06894042.1 HMPREF0220_3289 MarR family transcriptional regulator 41987 42424 -1
CDS - EFH05732.1 HMPREF0220_3289 - 41987 42424 -1
CDS adhA ZP_06894043.1 HMPREF0220_3290 alcohol dehydrogenase 42528 43526 1
CDS adhA EFH05733.1 HMPREF0220_3290 - 42528 43526 1
CDS nit4 ZP_06894044.1 HMPREF0220_3291 Cyanoalanine nitrilase 43647 44573 -1
CDS nit4 EFH05734.1 HMPREF0220_3291 - 43647 44573 -1
CDS - ZP_06894045.1 HMPREF0220_3292 amidohydrolase 44959 46560 1
CDS - EFH05735.1 HMPREF0220_3292 - 44959 46560 1
CDS - ZP_06894046.1 HMPREF0220_3293 hypothetical protein 46879 47013 -1
CDS - EFH05736.1 HMPREF0220_3293 - 46879 47013 -1
CDS serS ZP_06894047.1 HMPREF0220_3294 serine--tRNA ligase 47347 48618 1
CDS serS EFH05737.1 HMPREF0220_3294 - 47347 48618 1
CDS - ZP_06894048.1 HMPREF0220_3295 probable two component sensor histidine kinase 48891 50396 1
CDS - EFH05738.1 HMPREF0220_3295 - 48891 50396 1
CDS - ZP_06894049.1 HMPREF0220_3296 possible response regulator 50510 51208 1
CDS - EFH05739.1 HMPREF0220_3296 - 50510 51208 1
CDS - ZP_06894050.1 HMPREF0220_3297 brp/Blh family beta-carotene 15,15'-monooxygenase 51492 52580 1
CDS - EFH05740.1 HMPREF0220_3297 - 51492 52580 1
CDS hipO ZP_06894051.1 HMPREF0220_3298 M20D family peptidase 52811 53995 1
CDS hipO EFH05741.1 HMPREF0220_3298 - 52811 53995 1
CDS mtrF ZP_06894052.1 HMPREF0220_3299 efflux pump component MtrF 54046 55596 1
CDS mtrF EFH05742.1 HMPREF0220_3299 - 54046 55596 1
CDS glyA ZP_06894053.1 HMPREF0220_3300 glycine hydroxymethyltransferase 55668 56924 1
CDS glyA EFH05743.1 HMPREF0220_3300 - 55668 56924 1
CDS aca4 ZP_06894054.1 HMPREF0220_3301 possible calcium-transporting ATPase 57095 59869 1
CDS aca4 EFH05744.1 HMPREF0220_3301 - 57095 59869 1
CDS - ZP_06894055.1 HMPREF0220_3302 cation efflux family protein 60560 61738 1
CDS - EFH05745.1 HMPREF0220_3302 - 60560 61738 1