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Clostridium difficile NAP08 contig00124, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06894203.1 HMPREF0220_3450 conserved hypothetical protein 1 441 1
CDS - EFH05509.1 HMPREF0220_3450 - 1 441 1
CDS recD ZP_06894204.1 HMPREF0220_3451 RecD/TraA family helicase 705 2924 1
CDS recD EFH05510.1 HMPREF0220_3451 - 705 2924 1
CDS - ZP_06894205.1 HMPREF0220_3452 ComF family protein 2927 3709 1
CDS - EFH05511.1 HMPREF0220_3452 - 2927 3709 1
CDS - ZP_06894206.1 HMPREF0220_3453 probable transcription antiterminator 4050 5954 1
CDS - EFH05512.1 HMPREF0220_3453 - 4050 5954 1
CDS celC2 ZP_06894207.1 HMPREF0220_3454 PTS family cellobiose porter, IIA component 6095 6403 1
CDS celC2 EFH05513.1 HMPREF0220_3454 - 6095 6403 1
CDS licB4 ZP_06894208.1 HMPREF0220_3455 PTS family lichenan porter component IIB 6428 6754 1
CDS licB4 EFH05514.1 HMPREF0220_3455 - 6428 6754 1
CDS celB ZP_06894209.1 HMPREF0220_3456 PTS family oligomeric beta-glucoside porter component IIC 6794 8128 1
CDS celB EFH05515.1 HMPREF0220_3456 - 6794 8128 1
CDS - ZP_06894210.1 HMPREF0220_3457 glycine/betaine/sarcosine/D-proline reductase family selenoprotein B 8139 8657 1
CDS - EFH05516.1 HMPREF0220_3457 - 8139 8657 1
CDS ansB ZP_06894211.1 HMPREF0220_3458 N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase 8753 9712 1
CDS ansB EFH05517.1 HMPREF0220_3458 - 8753 9712 1
CDS - ZP_06894212.1 HMPREF0220_3459 M20/M25/M40 family peptidase 9761 10813 1
CDS - EFH05518.1 HMPREF0220_3459 - 9761 10813 1
CDS cutC ZP_06894213.1 HMPREF0220_3460 CutC family protein 10816 11490 1
CDS cutC EFH05519.1 HMPREF0220_3460 - 10816 11490 1
CDS - ZP_06894214.1 HMPREF0220_3461 hypothetical protein 11778 11903 1
CDS - EFH05520.1 HMPREF0220_3461 - 11778 11903 1
CDS yfiA2 ZP_06894215.1 HMPREF0220_3462 ribosomal subunit interface protein 12025 12594 1
CDS yfiA2 EFH05521.1 HMPREF0220_3462 - 12025 12594 1
CDS secA2 ZP_06894216.1 HMPREF0220_3463 preprotein translocase subunit SecA 12726 15401 1
CDS secA2 EFH05522.1 HMPREF0220_3463 - 12726 15401 1
CDS prfB ZP_06894217.1 HMPREF0220_3464 peptide chain release factor RF2 15507 16523 1
CDS prfB EFH05523.1 HMPREF0220_3464 - 15507 16523 1
CDS yhgF ZP_06894218.1 HMPREF0220_3465 YhgF like protein 16638 18809 1
CDS yhgF EFH05524.1 HMPREF0220_3465 - 16638 18809 1
CDS hutI ZP_06894219.1 HMPREF0220_3466 amidohydrolase 18957 20123 1
CDS hutI EFH05525.1 HMPREF0220_3466 - 18957 20123 1
CDS - ZP_06894220.1 HMPREF0220_3467 riboflavin transporter 20424 21029 1
CDS - EFH05526.1 HMPREF0220_3467 - 20424 21029 1
CDS - ZP_06894221.1 HMPREF0220_3468 conserved hypothetical protein 21359 22399 1
CDS - EFH05527.1 HMPREF0220_3468 - 21359 22399 1
CDS - ZP_06894222.1 HMPREF0220_3469 ATP/GTP hydrolase 22538 22990 1
CDS - EFH05528.1 HMPREF0220_3469 - 22538 22990 1
CDS yeaZ ZP_06894223.1 HMPREF0220_3470 universal bacterial protein YeaZ 22990 23706 1
CDS yeaZ EFH05529.1 HMPREF0220_3470 - 22990 23706 1
CDS rimI ZP_06894224.1 HMPREF0220_3471 possible ribosomal-protein-alanine N-acetyltransferase 23696 24172 1
CDS rimI EFH05530.1 HMPREF0220_3471 - 23696 24172 1
CDS gcp ZP_06894225.1 HMPREF0220_3472 O-sialoglycoprotein endopeptidase 24148 25194 1
CDS gcp EFH05531.1 HMPREF0220_3472 - 24148 25194 1
CDS - ZP_06894226.1 HMPREF0220_3473 4-hydroxyphenylacetate decarboxylase, catalytic subunit 25491 28199 1
CDS - EFH05532.1 HMPREF0220_3473 - 25491 28199 1
CDS - ZP_06894227.1 HMPREF0220_3474 4-hydroxyphenylacetate decarboxylase, regulatory subunit 28203 28460 1
CDS - EFH05533.1 HMPREF0220_3474 - 28203 28460 1
CDS ybiY2 ZP_06894228.1 HMPREF0220_3475 pyruvate formate-lyase activating enzyme 28453 29403 1
CDS ybiY2 EFH05534.1 HMPREF0220_3475 - 28453 29403 1
CDS - ZP_06894229.1 HMPREF0220_3476 conserved hypothetical protein 29548 29673 1
CDS - EFH05535.1 HMPREF0220_3476 - 29548 29673 1
CDS - ZP_06894230.1 HMPREF0220_3477 membrane spanning protein 29767 30738 -1
CDS - EFH05536.1 HMPREF0220_3477 - 29767 30738 -1
CDS - ZP_06894231.1 HMPREF0220_3478 lactoylglutation lyase 31573 32040 1
CDS - EFH05537.1 HMPREF0220_3478 - 31573 32040 1
CDS - ZP_06894232.1 HMPREF0220_3479 conserved hypothetical protein 32155 32349 -1
CDS - EFH05538.1 HMPREF0220_3479 - 32155 32349 -1
CDS ntrC ZP_06894233.1 HMPREF0220_3480 nitrogen regulation protein NR(I) 32333 32578 -1
CDS ntrC EFH05539.1 HMPREF0220_3480 - 32333 32578 -1
CDS flrC ZP_06894234.1 HMPREF0220_3481 flagellar regulatory protein C 32633 32872 -1
CDS flrC EFH05540.1 HMPREF0220_3481 - 32633 32872 -1
CDS - ZP_06894235.1 HMPREF0220_3482 ComG operon protein 1 33063 33212 1
CDS - EFH05541.1 HMPREF0220_3482 - 33063 33212 1
CDS - ZP_06894236.1 HMPREF0220_3483 probable cyclic nucleotide-binding protein 33532 34185 1
CDS - EFH05542.1 HMPREF0220_3483 - 33532 34185 1
CDS - ZP_06894237.1 HMPREF0220_3484 MATE efflux family protein 34325 35701 -1
CDS - EFH05543.1 HMPREF0220_3484 - 34325 35701 -1
CDS - ZP_06894238.1 HMPREF0220_3485 ABC superfamily ATP binding cassette transporter 35717 37630 -1
CDS - EFH05544.1 HMPREF0220_3485 - 35717 37630 -1
CDS - ZP_06894239.1 HMPREF0220_3486 redox-sensing transcriptional repressor rex 37766 38398 1
CDS - EFH05545.1 HMPREF0220_3486 - 37766 38398 1
CDS - ZP_06894240.1 HMPREF0220_3487 FwdE family protein 38537 39076 1
CDS - EFH05546.1 HMPREF0220_3487 - 38537 39076 1
CDS - ZP_06894241.1 HMPREF0220_3488 ferredoxin 39242 39454 -1
CDS - EFH05547.1 HMPREF0220_3488 - 39242 39454 -1
CDS capA ZP_06894242.1 HMPREF0220_3489 encapsulation protein CapA 39697 40764 1
CDS capA EFH05548.1 HMPREF0220_3489 - 39697 40764 1
CDS cooS ZP_06894243.1 HMPREF0220_3490 carbon-monoxide dehydrogenase (acceptor) 40934 42835 1
CDS cooS EFH05549.1 HMPREF0220_3490 - 40934 42835 1
CDS narB ZP_06894244.1 HMPREF0220_3491 nitrate reductase 42816 43301 1
CDS narB EFH05550.1 HMPREF0220_3491 - 42816 43301 1
CDS narC ZP_06894245.1 HMPREF0220_3492 nitrate reductase 43273 44502 1
CDS narC EFH05551.1 HMPREF0220_3492 - 43273 44502 1
CDS cfa ZP_06894246.1 HMPREF0220_3493 cyclopropane-fatty-acyl-phospholipid synthase 44655 45842 -1
CDS cfa EFH05552.1 HMPREF0220_3493 - 44655 45842 -1