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Clostridium difficile NAP08 contig00127, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06894270.1 HMPREF0220_3517 probable membrane-associated nucleotidase 1 1186 1
CDS - EFH05438.1 HMPREF0220_3517 - 1 1186 1
CDS - ZP_06894271.1 HMPREF0220_3518 LysR family transcriptional regulator 1334 2266 -1
CDS - EFH05439.1 HMPREF0220_3518 - 1334 2266 -1
CDS - ZP_06894272.1 HMPREF0220_3519 chromate transporter 2329 2892 1
CDS - EFH05440.1 HMPREF0220_3519 - 2329 2892 1
CDS - ZP_06894273.1 HMPREF0220_3520 chromate transporter 2889 3455 1
CDS - EFH05441.1 HMPREF0220_3520 - 2889 3455 1
CDS - ZP_06894274.1 HMPREF0220_3521 conserved hypothetical protein 3584 4417 -1
CDS - EFH05442.1 HMPREF0220_3521 - 3584 4417 -1
CDS uvrA3 ZP_06894275.1 HMPREF0220_3522 excision endonuclease subunit UvrA 4602 8030 -1
CDS uvrA3 EFH05443.1 HMPREF0220_3522 - 4602 8030 -1
CDS - ZP_06894276.1 HMPREF0220_3523 probable signaling protein 8679 10907 1
CDS - EFH05444.1 HMPREF0220_3523 - 8679 10907 1
CDS - ZP_06894277.1 HMPREF0220_3524 PTS system IIA 2 domain protein 11172 13202 1
CDS - EFH05445.1 HMPREF0220_3524 - 11172 13202 1
CDS - ZP_06894278.1 HMPREF0220_3525 PTS system, IIA component 13199 13651 1
CDS - EFH05446.1 HMPREF0220_3525 - 13199 13651 1
CDS fruA3 ZP_06894279.1 HMPREF0220_3526 PTS family fructose porter, IIC component 13653 14708 1
CDS fruA3 EFH05447.1 HMPREF0220_3526 - 13653 14708 1
CDS frwB3 ZP_06894280.1 HMPREF0220_3527 PTS family fructose porter, IIB component 14779 15087 1
CDS frwB3 EFH05448.1 HMPREF0220_3527 - 14779 15087 1
CDS - ZP_06894281.1 HMPREF0220_3528 probable sugar-phosphate kinase 15191 16456 1
CDS - EFH05449.1 HMPREF0220_3528 - 15191 16456 1
CDS - ZP_06894282.1 HMPREF0220_3529 HAD-superfamily hydrolase 16544 17257 1
CDS - EFH05450.1 HMPREF0220_3529 - 16544 17257 1
CDS - ZP_06894283.1 HMPREF0220_3530 spore coat protein F family protein 17439 17732 -1
CDS - EFH05451.1 HMPREF0220_3530 - 17439 17732 -1
CDS - ZP_06894284.1 HMPREF0220_3531 conserved hypothetical protein 17738 17953 -1
CDS - EFH05452.1 HMPREF0220_3531 - 17738 17953 -1
CDS - ZP_06894285.1 HMPREF0220_3532 probable nitroreductase 18503 19015 -1
CDS - EFH05453.1 HMPREF0220_3532 - 18503 19015 -1
CDS purE ZP_06894286.1 HMPREF0220_3533 phosphoribosylaminoimidazole carboxylase catalytic subunit PurE 19465 19941 1
CDS purE EFH05454.1 HMPREF0220_3533 - 19465 19941 1
CDS purC2 EFH05455.1 HMPREF0220_3534 - 19947 20645 1
CDS purC2 ZP_06894287.1 HMPREF0220_3534 phosphoribosylaminoimidazole-succinocarboxamide synthetase 19947 20645 1
CDS purF ZP_06894288.1 HMPREF0220_3535 amidophosphoribosyltransferase 20657 22024 1
CDS purF EFH05456.1 HMPREF0220_3535 - 20657 22024 1
CDS purM ZP_06894289.1 HMPREF0220_3536 phosphoribosylaminoimidazole synthetase 22018 23094 1
CDS purM EFH05457.1 HMPREF0220_3536 - 22018 23094 1
CDS purN ZP_06894290.1 HMPREF0220_3537 phosphoribosylglycinamide formyltransferase 23088 23681 1
CDS purN EFH05458.1 HMPREF0220_3537 - 23088 23681 1
CDS purH2 ZP_06894291.1 HMPREF0220_3538 bifunctional purine biosynthesis protein PurH 23674 25206 1
CDS purH2 EFH05459.1 HMPREF0220_3538 - 23674 25206 1
CDS purD ZP_06894292.1 HMPREF0220_3539 phosphoribosylamine-glycine ligase 25217 26467 1
CDS purD EFH05460.1 HMPREF0220_3539 - 25217 26467 1
CDS purL ZP_06894293.1 HMPREF0220_3540 phosphoribosylformylglycinamidine synthase 26492 30298 1
CDS purL EFH05461.1 HMPREF0220_3540 - 26492 30298 1
CDS rfbD ZP_06894294.1 HMPREF0220_3541 possible dTDP-4-dehydrorhamnose reductase 30502 31374 1
CDS rfbD EFH05462.1 HMPREF0220_3541 - 30502 31374 1
CDS rmlA ZP_06894295.1 HMPREF0220_3542 glucose-1-phosphate thymidylyltransferase 31483 32352 1
CDS rmlA EFH05463.1 HMPREF0220_3542 - 31483 32352 1
CDS rfbC ZP_06894296.1 HMPREF0220_3543 dTDP-4-dehydrorhamnose 3,5-epimerase 32401 32958 1
CDS rfbC EFH05464.1 HMPREF0220_3543 - 32401 32958 1
CDS rffG ZP_06894297.1 HMPREF0220_3544 dTDP-glucose 4,6-dehydratase 32996 33979 1
CDS rffG EFH05465.1 HMPREF0220_3544 - 32996 33979 1
CDS - ZP_06894298.1 HMPREF0220_3545 probable transglycosylase 34017 34685 1
CDS - EFH05466.1 HMPREF0220_3545 - 34017 34685 1
CDS - ZP_06894299.1 HMPREF0220_3546 conserved hypothetical protein 34694 35122 1
CDS - EFH05467.1 HMPREF0220_3546 - 34694 35122 1
CDS - ZP_06894300.1 HMPREF0220_3547 flagellar motor switch protein 35146 35460 1
CDS - EFH05468.1 HMPREF0220_3547 - 35146 35460 1
CDS - ZP_06894301.1 HMPREF0220_3548 FlgM superfamily anti-sigma-28 factor 35612 35887 1
CDS - EFH05469.1 HMPREF0220_3548 - 35612 35887 1
CDS - ZP_06894302.1 HMPREF0220_3549 probable flagellar biosynthesis protein 35892 36308 1
CDS - EFH05470.1 HMPREF0220_3549 - 35892 36308 1
CDS flgK ZP_06894303.1 HMPREF0220_3550 flagellar hook-associated protein FlgK 36326 37636 1
CDS flgK EFH05471.1 HMPREF0220_3550 - 36326 37636 1
CDS flgL ZP_06894304.1 HMPREF0220_3551 flagellar hook-associated protein 3 37655 38587 1
CDS flgL EFH05472.1 HMPREF0220_3551 - 37655 38587 1
CDS - ZP_06894305.1 HMPREF0220_3552 flagellar assembly factor FliW 38604 38996 1
CDS - EFH05473.1 HMPREF0220_3552 - 38604 38996 1
CDS csrA ZP_06894306.1 HMPREF0220_3553 carbon storage regulator 38990 39202 1
CDS csrA EFH05474.1 HMPREF0220_3553 - 38990 39202 1
CDS fliS ZP_06894307.1 HMPREF0220_3554 flagellar protein FliS 39224 39619 1
CDS fliS EFH05475.1 HMPREF0220_3554 - 39224 39619 1
CDS - ZP_06894308.1 HMPREF0220_3555 flagellar protein FliS 39619 39975 1
CDS - EFH05476.1 HMPREF0220_3555 - 39619 39975 1
CDS - ZP_06894309.1 HMPREF0220_3556 flagellar cap protein 39996 41519 1
CDS - EFH05477.1 HMPREF0220_3556 - 39996 41519 1
CDS - ZP_06894310.1 HMPREF0220_3557 conserved hypothetical protein 41522 41857 1
CDS - EFH05478.1 HMPREF0220_3557 - 41522 41857 1
CDS hag ZP_06894311.1 HMPREF0220_3558 flagellin protein 41958 42830 1
CDS hag EFH05479.1 HMPREF0220_3558 - 41958 42830 1
CDS - ZP_06894312.1 HMPREF0220_3559 glycosyltransferase 42923 45064 1
CDS - EFH05480.1 HMPREF0220_3559 - 42923 45064 1
CDS - ZP_06894313.1 HMPREF0220_3560 group 2 glycosyl transferase 45088 46965 1
CDS - EFH05481.1 HMPREF0220_3560 - 45088 46965 1
CDS - ZP_06894314.1 HMPREF0220_3561 group 2 glycosyl transferase 46958 49072 1
CDS - EFH05482.1 HMPREF0220_3561 - 46958 49072 1
CDS - ZP_06894315.1 HMPREF0220_3562 conserved hypothetical protein 49081 50076 1
CDS - EFH05483.1 HMPREF0220_3562 - 49081 50076 1
CDS purD2 ZP_06894316.1 HMPREF0220_3563 phosphoribosylamine-glycine ligase 50168 51400 1
CDS purD2 EFH05484.1 HMPREF0220_3563 - 50168 51400 1
CDS - ZP_06894317.1 HMPREF0220_3564 ornithine cyclodeaminase/mu-crystallin family protein 51411 52364 1
CDS - EFH05485.1 HMPREF0220_3564 - 51411 52364 1