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Clostridium difficile NAP08 contig00137, whole genome shotgun sequence. features

Type Gene Protein id Locus Product Start pos End pos Strand
CDS - ZP_06894472.1 HMPREF0220_3719 carbamoyl-phosphate synthase, large subunit 1 388 1
CDS - EFH05241.1 HMPREF0220_3719 - 1 388 1
CDS - ZP_06894473.1 HMPREF0220_3720 delta subunit superfamily DNA polymerase III 573 950 -1
CDS - EFH05242.1 HMPREF0220_3720 - 573 950 -1
CDS - ZP_06894474.1 HMPREF0220_3721 conserved hypothetical protein 1017 1466 -1
CDS - EFH05243.1 HMPREF0220_3721 - 1017 1466 -1
CDS - ZP_06894475.1 HMPREF0220_3722 PadR family transcriptional regulator 1471 1800 -1
CDS - EFH05244.1 HMPREF0220_3722 - 1471 1800 -1
CDS - ZP_06894476.1 HMPREF0220_3723 conserved hypothetical protein 2084 2221 1
CDS - EFH05245.1 HMPREF0220_3723 - 2084 2221 1
CDS - ZP_06894477.1 HMPREF0220_3724 response regulator 2218 2904 1
CDS - EFH05246.1 HMPREF0220_3724 - 2218 2904 1
CDS resE3 ZP_06894478.1 HMPREF0220_3725 sensor histidine kinase ResE 2891 3880 1
CDS resE3 EFH05247.1 HMPREF0220_3725 - 2891 3880 1
CDS - ZP_06894479.1 HMPREF0220_3726 ABC superfamily ATP binding cassette transporter, ABC protein 3963 4649 1
CDS - EFH05248.1 HMPREF0220_3726 - 3963 4649 1
CDS - ZP_06894480.1 HMPREF0220_3727 ABC superfamily ATP binding cassette transporter, permease protein 4649 7195 1
CDS - EFH05249.1 HMPREF0220_3727 - 4649 7195 1
CDS - ZP_06894481.1 HMPREF0220_3728 MerR family transcriptional regulator 7332 8189 -1
CDS - EFH05250.1 HMPREF0220_3728 - 7332 8189 -1
CDS rluC ZP_06894482.1 HMPREF0220_3729 ribosomal large subunit pseudouridine synthase 8210 8890 -1
CDS rluC EFH05251.1 HMPREF0220_3729 - 8210 8890 -1
CDS - ZP_06894483.1 HMPREF0220_3730 SAM dependent methyltransferase 8875 9747 -1
CDS - EFH05252.1 HMPREF0220_3730 - 8875 9747 -1
CDS - ZP_06894484.1 HMPREF0220_3731 conserved hypothetical protein 9914 10657 1
CDS - EFH05253.1 HMPREF0220_3731 - 9914 10657 1
CDS - ZP_06894485.1 HMPREF0220_3732 conserved hypothetical protein 10877 11173 -1
CDS - EFH05254.1 HMPREF0220_3732 - 10877 11173 -1
CDS - ZP_06894486.1 HMPREF0220_3733 resolvase 11307 11879 1
CDS - EFH05255.1 HMPREF0220_3733 - 11307 11879 1
CDS mdeA ZP_06894487.1 HMPREF0220_3734 methionine gamma-lyase 12440 13594 1
CDS mdeA EFH05256.1 HMPREF0220_3734 - 12440 13594 1
CDS - ZP_06894488.1 HMPREF0220_3735 major facilitator family protein 13645 14898 1
CDS - EFH05257.1 HMPREF0220_3735 - 13645 14898 1
CDS - ZP_06894489.1 HMPREF0220_3736 probable sodium:solute symporter 15009 16418 1
CDS - EFH05258.1 HMPREF0220_3736 - 15009 16418 1
CDS - ZP_06894490.1 HMPREF0220_3737 conserved hypothetical protein 16433 16663 1
CDS - EFH05259.1 HMPREF0220_3737 - 16433 16663 1
CDS - ZP_06894491.1 HMPREF0220_3738 conserved hypothetical protein 16680 17210 1
CDS - EFH05260.1 HMPREF0220_3738 - 16680 17210 1
CDS - ZP_06894492.1 HMPREF0220_3739 conserved hypothetical protein 17383 18093 1
CDS - EFH05261.1 HMPREF0220_3739 - 17383 18093 1
CDS - ZP_06894493.1 HMPREF0220_3740 SEC-C domain protein 18208 18705 1
CDS - EFH05262.1 HMPREF0220_3740 - 18208 18705 1
CDS - ZP_06894494.1 HMPREF0220_3741 conserved hypothetical protein 18715 18876 1
CDS - EFH05263.1 HMPREF0220_3741 - 18715 18876 1
CDS - ZP_06894495.1 HMPREF0220_3742 membrane dipeptidase 18986 19924 1
CDS - EFH05264.1 HMPREF0220_3742 - 18986 19924 1
CDS yabG ZP_06894496.1 HMPREF0220_3743 sporulation peptidase YabG 20008 20868 1
CDS yabG EFH05265.1 HMPREF0220_3743 - 20008 20868 1
CDS veg ZP_06894497.1 HMPREF0220_3744 Veg protein 20974 21282 1
CDS veg EFH05266.1 HMPREF0220_3744 - 20974 21282 1
CDS - ZP_06894498.1 HMPREF0220_3745 conserved hypothetical protein 21375 22925 1
CDS - EFH05267.1 HMPREF0220_3745 - 21375 22925 1
CDS ispE ZP_06894499.1 HMPREF0220_3746 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 23043 23933 1
CDS ispE EFH05268.1 HMPREF0220_3746 - 23043 23933 1
CDS gntR3 ZP_06894500.1 HMPREF0220_3747 GntR family transcriptional regulator 23881 24597 1
CDS gntR3 EFH05269.1 HMPREF0220_3747 - 23881 24597 1
CDS spoIIR ZP_06894501.1 HMPREF0220_3748 stage II sporulation protein R 24743 25402 1
CDS spoIIR EFH05270.1 HMPREF0220_3748 - 24743 25402 1
CDS amiD8 ZP_06894502.1 HMPREF0220_3749 N-acetylmuramoyl-L-alanine amidase 25432 25938 1
CDS amiD8 EFH05271.1 HMPREF0220_3749 - 25432 25938 1
CDS murI ZP_06894503.1 HMPREF0220_3750 glutamate racemase 26140 26946 1
CDS murI EFH05272.1 HMPREF0220_3750 - 26140 26946 1
CDS - ZP_06894504.1 HMPREF0220_3751 conserved hypothetical protein 26963 27391 1
CDS - EFH05273.1 HMPREF0220_3751 - 26963 27391 1
CDS - ZP_06894505.1 HMPREF0220_3752 tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) 27574 28962 1
CDS - EFH05274.1 HMPREF0220_3752 - 27574 28962 1
CDS ftsH2 ZP_06894506.1 HMPREF0220_3753 M41 family endopeptidase FtsH 28972 30966 1
CDS ftsH2 EFH05275.1 HMPREF0220_3753 - 28972 30966 1
CDS birA ZP_06894507.1 HMPREF0220_3754 possible biotin--[acetyl-CoA-carboxylase] ligase 31280 32257 1
CDS birA EFH05276.1 HMPREF0220_3754 - 31280 32257 1
CDS dmpA ZP_06894508.1 HMPREF0220_3755 L-aminopeptidase/D-esterase 32250 33209 1
CDS dmpA EFH05277.1 HMPREF0220_3755 - 32250 33209 1
CDS - ZP_06894509.1 HMPREF0220_3756 membrane protein 33376 33993 1
CDS - EFH05278.1 HMPREF0220_3756 - 33376 33993 1
CDS coaX ZP_06894510.1 HMPREF0220_3757 pantothenate kinase 34012 34782 1
CDS coaX EFH05279.1 HMPREF0220_3757 - 34012 34782 1
CDS dus ZP_06894511.1 HMPREF0220_3758 tRNA-dihydrouridine synthase 34919 35887 1
CDS dus EFH05280.1 HMPREF0220_3758 - 34919 35887 1
CDS greA ZP_06894512.1 HMPREF0220_3759 transcription elongation factor GreA 35996 36475 1
CDS greA EFH05281.1 HMPREF0220_3759 - 35996 36475 1
CDS lysS ZP_06894513.1 HMPREF0220_3760 lysine--tRNA ligase 36490 38019 1
CDS lysS EFH05282.1 HMPREF0220_3760 - 36490 38019 1
CDS - ZP_06894514.1 HMPREF0220_3761 conserved hypothetical protein 38241 38522 1
CDS - EFH05283.1 HMPREF0220_3761 - 38241 38522 1